14-105924590-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924590
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924590
    reference: chr 14
allele count: 3
allele frequency: 2.616431187859759e-5
allele num: 114660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.551-17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.551-17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.500-17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.548-17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.551-17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.293-17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*500-17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.751-17A>G
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36509
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/14-105924593-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924593
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924593
    reference: chr 14
allele count: 1
allele frequency: 8.685079034219211e-6
allele num: 115140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*500-14C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.551-14C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.500-14C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.551-14C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.551-14C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.293-14C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.548-14C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.751-14C>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44010
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

14-105924597-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924597
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924597
    reference: chr 14
allele count: 1
allele frequency: 8.635280301198577e-6
allele num: 115804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.751-10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.551-10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.500-10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.551-10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.548-10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*500-10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.293-10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.551-10C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

14-105924603-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924603
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924603
    reference: chr 14
allele count: 48
allele frequency: 4.11240575736806e-4
allele num: 116720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.548-4G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.500-4G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.551-4G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.293-4G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*500-4G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.551-4G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.751-4G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.551-4G>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37697
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 7.75e1
  variant carriers: 1
hgvs: c.551-4G>T
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

14-105924608-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924608
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924608
    reference: chr 14
allele count: 3
allele frequency: 2.559290223511346e-5
allele num: 117220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.552C>T
  hgvsp: ENST00000406191.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.549C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.552C>T
  hgvsp: ENST00000331320.7:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.552C>T
  hgvsp: ENST00000438610.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.501C>T
  hgvsp: ENST00000405646.1:c.501C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*501C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.294C>T
  hgvsp: ENST00000498644.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.752C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46503
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
hgvs: c.552C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

14-105924609-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924609
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924609
    reference: chr 14
allele count: 2
allele frequency: 1.703084285641296e-5
allele num: 117434
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.553G>A
  hgvsp: ENSP00000333633.7:p.Glu185Lys
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*502G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.553G>A
  hgvsp: ENSP00000393438.1:p.Glu185Lys
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.502G>A
  hgvsp: ENSP00000384180.1:p.Glu168Lys
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.553G>A
  hgvsp: ENSP00000385702.1:p.Glu185Lys
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.295G>A
  hgvsp: ENSP00000448146.1:p.Glu99Lys
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.753G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.550G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14567
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu185Lys
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

14-105924614-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924614
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924614
    reference: chr 14
allele count: 2
allele frequency: 1.69643917417341e-5
allele num: 117894
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.558G>C
  hgvsp: ENSP00000385702.1:p.Glu186Asp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.558G>C
  hgvsp: ENSP00000333633.7:p.Glu186Asp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.507G>C
  hgvsp: ENSP00000384180.1:p.Glu169Asp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.555G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*507G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.558G>C
  hgvsp: ENSP00000393438.1:p.Glu186Asp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.300G>C
  hgvsp: ENSP00000448146.1:p.Glu100Asp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.758G>C
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu186Asp
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

14-105924622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924622
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924622
    reference: chr 14
allele count: 2
allele frequency: 1.691818366380186e-5
allele num: 118216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*515G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.515G>A
  hgvsp: ENSP00000384180.1:p.Arg172Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.566G>A
  hgvsp: ENSP00000333633.7:p.Arg189Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.566G>A
  hgvsp: ENSP00000393438.1:p.Arg189Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.766G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.563G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.566G>A
  hgvsp: ENSP00000385702.1:p.Arg189Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.308G>A
  hgvsp: ENSP00000448146.1:p.Arg103Gln
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg189Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/14-105924632-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924632
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924632
    reference: chr 14
allele count: 3
allele frequency: 2.5312610742672e-5
allele num: 118518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.318C>A
  hgvsp: ENST00000498644.1:c.318C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.576C>A
  hgvsp: ENST00000438610.1:c.576C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.576C>A
  hgvsp: ENST00000406191.1:c.576C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*525C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.573C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.576C>A
  hgvsp: ENST00000331320.7:c.576C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.525C>A
  hgvsp: ENST00000405646.1:c.525C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.776C>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser192Ser
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-105924634-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924634
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924634
    reference: chr 14
allele count: 1
allele frequency: 8.43469019382918e-6
allele num: 118558
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.578G>T
  hgvsp: ENSP00000333633.7:p.Arg193Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*527G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.527G>T
  hgvsp: ENSP00000384180.1:p.Arg176Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.320G>T
  hgvsp: ENSP00000448146.1:p.Arg107Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.578G>T
  hgvsp: ENSP00000385702.1:p.Arg193Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.578G>T
  hgvsp: ENSP00000393438.1:p.Arg193Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.778G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.575G>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47829
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5392
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg193Met
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

14-105924636-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924636
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924636
    reference: chr 14
allele count: 1
allele frequency: 8.432129787341686e-6
allele num: 118594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.580T>C
  hgvsp: ENST00000438610.1:c.580T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.580T>C
  hgvsp: ENST00000331320.7:c.580T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.529T>C
  hgvsp: ENST00000405646.1:c.529T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*529T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.577T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.322T>C
  hgvsp: ENST00000498644.1:c.322T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.580T>C
  hgvsp: ENST00000406191.1:c.580T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.780T>C
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15230
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu194Leu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

14-105924643-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924643
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924643
    reference: chr 14
allele count: 9
allele frequency: 7.584823610713141e-5
allele num: 118658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.587C>G
  hgvsp: ENSP00000393438.1:p.Thr196Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.584C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.587C>G
  hgvsp: ENSP00000385702.1:p.Thr196Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.587C>G
  hgvsp: ENSP00000333633.7:p.Thr196Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*536C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.329C>G
  hgvsp: ENSP00000448146.1:p.Thr110Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.536C>G
  hgvsp: ENSP00000384180.1:p.Thr179Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.787C>G
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr196Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

14-105924647-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924647
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924647
    reference: chr 14
allele count: 1
allele frequency: 8.42516766083645e-6
allele num: 118692
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.591G>A
  hgvsp: ENST00000331320.7:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.591G>A
  hgvsp: ENST00000406191.1:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.333G>A
  hgvsp: ENST00000498644.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.791G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.540G>A
  hgvsp: ENST00000405646.1:c.540G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*540G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.588G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.591G>A
  hgvsp: ENST00000438610.1:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln197Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

14-105924650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924650
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924650
    reference: chr 14
allele count: 1
allele frequency: 8.424174009738345e-6
allele num: 118706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.591G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.594G>A
  hgvsp: ENST00000331320.7:c.594G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.543G>A
  hgvsp: ENST00000405646.1:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.794G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*543G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.336G>A
  hgvsp: ENST00000498644.1:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.594G>A
  hgvsp: ENST00000438610.1:c.594G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.594G>A
  hgvsp: ENST00000406191.1:c.594G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47824
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val198Val
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-105924659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924659
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924659
    reference: chr 14
allele count: 1
allele frequency: 8.427297702718647e-6
allele num: 118662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.552G>A
  hgvsp: ENST00000405646.1:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.803G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.603G>A
  hgvsp: ENST00000331320.7:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.345G>A
  hgvsp: ENST00000498644.1:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*552G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.603G>A
  hgvsp: ENST00000438610.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.603G>A
  hgvsp: ENST00000406191.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.600G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47750
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala201Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

14-105924659-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924659
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924659
    reference: chr 14
allele count: 2
allele frequency: 1.685459540543729e-5
allele num: 118662
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.603G>C
  hgvsp: ENST00000331320.7:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.603G>C
  hgvsp: ENST00000438610.1:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*552G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.600G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.603G>C
  hgvsp: ENST00000406191.1:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.552G>C
  hgvsp: ENST00000405646.1:c.552G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.345G>C
  hgvsp: ENST00000498644.1:c.345G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.803G>C
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38043
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala201Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

14-105924667-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924667
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924667
    reference: chr 14
allele count: 1
allele frequency: 8.43113449345744e-6
allele num: 118608
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.611C>G
  hgvsp: ENSP00000385702.1:p.Pro204Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.560C>G
  hgvsp: ENSP00000384180.1:p.Pro187Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.608C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.353C>G
  hgvsp: ENSP00000448146.1:p.Pro118Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.611C>G
  hgvsp: ENSP00000333633.7:p.Pro204Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.811C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.611C>G
  hgvsp: ENSP00000393438.1:p.Pro204Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*560C>G
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro204Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-105924671-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924671
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924671
    reference: chr 14
allele count: 9
allele frequency: 7.592373882233846e-5
allele num: 118540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*564C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.612C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.564C>A
  hgvsp: ENST00000405646.1:c.564C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.357C>A
  hgvsp: ENST00000498644.1:c.357C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.615C>A
  hgvsp: ENST00000406191.1:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.815C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.615C>A
  hgvsp: ENST00000331320.7:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.615C>A
  hgvsp: ENST00000438610.1:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37765
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47670
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu205Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

14-105924674-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924674
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924674
    reference: chr 14
allele count: 29
allele frequency: 2.447174778910417e-4
allele num: 118504
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*567A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.618A>G
  hgvsp: ENST00000406191.1:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.615A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.360A>G
  hgvsp: ENST00000498644.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.818A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.618A>G
  hgvsp: ENST00000438610.1:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.567A>G
  hgvsp: ENST00000405646.1:c.567A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.618A>G
  hgvsp: ENST00000331320.7:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 15585
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 9.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr206Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-105924676-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924676
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924676
    reference: chr 14
allele count: 1
allele frequency: 8.440813019110001e-6
allele num: 118472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.620A>C
  hgvsp: ENSP00000385702.1:p.Asp207Ala
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.362A>C
  hgvsp: ENSP00000448146.1:p.Asp121Ala
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.617A>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.620A>C
  hgvsp: ENSP00000333633.7:p.Asp207Ala
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.620A>C
  hgvsp: ENSP00000393438.1:p.Asp207Ala
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.820A>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.569A>C
  hgvsp: ENSP00000384180.1:p.Asp190Ala
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*569A>C
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47642
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5329
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp207Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

14-105924686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924686
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924686
    reference: chr 14
allele count: 6
allele frequency: 5.081731176420768e-5
allele num: 118070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.630C>T
  hgvsp: ENST00000438610.1:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.372C>T
  hgvsp: ENST00000498644.1:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.630C>T
  hgvsp: ENST00000331320.7:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*579C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.627C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.6C>T
  hgvsp: ENST00000434050.1:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.630C>T
  hgvsp: ENST00000406191.1:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.830C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.579C>T
  hgvsp: ENST00000405646.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile210Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

14-105924686-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924686
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924686
    reference: chr 14
allele count: 5
allele frequency: 4.234775980350639e-5
allele num: 118070
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.830C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.630C>G
  hgvsp: ENSP00000333633.7:p.Ile210Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.372C>G
  hgvsp: ENSP00000448146.1:p.Ile124Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.6C>G
  hgvsp: ENSP00000394106.1:p.Ile2Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.579C>G
  hgvsp: ENSP00000384180.1:p.Ile193Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.630C>G
  hgvsp: ENSP00000393438.1:p.Ile210Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*579C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.630C>G
  hgvsp: ENSP00000385702.1:p.Ile210Met
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.627C>G
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile210Met
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

14-105924689-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924689
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924689
    reference: chr 14
allele count: 2
allele frequency: 1.696036363019623e-5
allele num: 117922
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.375C>T
  hgvsp: ENST00000498644.1:c.375C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.582C>T
  hgvsp: ENST00000405646.1:c.582C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.633C>T
  hgvsp: ENST00000438610.1:c.633C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.833C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.633C>T
  hgvsp: ENST00000406191.1:c.633C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.630C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.633C>T
  hgvsp: ENST00000331320.7:c.633C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.9C>T
  hgvsp: ENST00000434050.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*582C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp211Asp
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

14-105924698-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924698
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924698
    reference: chr 14
allele count: 1
allele frequency: 8.531840829977476e-6
allele num: 117208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.642G>T
  hgvsp: ENST00000406191.1:c.642G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.639G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.642G>T
  hgvsp: ENST00000438610.1:c.642G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.18G>T
  hgvsp: ENST00000434050.1:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.591G>T
  hgvsp: ENST00000405646.1:c.591G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000494026
  gene symbol: MTA1
  hgvsc: ENST00000494026.1:n.842G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.642G>T
  hgvsp: ENST00000331320.7:c.642G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*591G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.384G>T
  hgvsp: ENST00000498644.1:c.384G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45121
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu214Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

14-105924712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924712
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924712
    reference: chr 14
allele count: 11
allele frequency: 9.539998612363838e-5
allele num: 115304
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+3G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+3G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+3G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+3G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+3G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+3G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+3G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+3G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31991
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 7.25e1
  variant carriers: 0
hgvs: c.653+3G>A
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/14-105924720-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924720
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924720
    reference: chr 14
allele count: 1
allele frequency: 8.801112460615022e-6
allele num: 113622
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+11C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+11C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+11C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+11C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+11C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+11C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+11C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+11C>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

14-105924720-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924720
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924719
    reference: chr 14
allele count: 1
allele frequency: 8.801112460615022e-6
allele num: 113622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+12delT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+12delT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+12delT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+12delT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+12delT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+12delT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+12delT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+12delT
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7335
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: CT
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

14-105924721-TCCTGGGCAAGGCCAGCAGGGGTGGTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924721
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924695
    reference: chr 14
allele count: 1
allele frequency: 8.812280794515236e-6
allele num: 113478
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14109
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36163
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: TCCTGGGCAAGGCCAGCAGGGGTGGTG
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-105924723-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924723
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924723
    reference: chr 14
allele count: 21
allele frequency: 1.863287904599659e-4
allele num: 112704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+14C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+14C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+14C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+14C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+14C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+14C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+14C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+14C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25651
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13618
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8577
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33564
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

14-105924724-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924724
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924724
    reference: chr 14
allele count: 19
allele frequency: 1.685413192349998e-4
allele num: 112732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+15T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+15T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+15T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+15T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+15T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+15T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+15T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+15T>C
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25604
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13657
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 8636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-105924725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924725
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924725
    reference: chr 14
allele count: 4
allele frequency: 3.560682938987698e-5
allele num: 112338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+16G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+16G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+16G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+16G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+16G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+16G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+16G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+16G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24640
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13342
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2622
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

14-105924725-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924725
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924725
    reference: chr 14
allele count: 1
allele frequency: 8.901707347469245e-6
allele num: 112338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+16G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+16G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+16G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+16G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+16G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+16G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+16G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+16G>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10146
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32712
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP

14-105924727-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924727
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924727
    reference: chr 14
allele count: 1
allele frequency: 9.009496008793267e-6
allele num: 110994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+18G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+18G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+18G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+18G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+18G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+18G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+18G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+18G>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3989
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD

14-105924742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924742
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924742
    reference: chr 14
allele count: 5
allele frequency: 4.633748517200474e-5
allele num: 107904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+33G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11505
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11299
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2752
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 14945
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7734
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

14-105924744-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924744
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924744
    reference: chr 14
allele count: 2
allele frequency: 1.8698928551394e-5
allele num: 106958
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+35G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+35G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+35G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+35G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+35G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+35G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+35G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+35G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7388
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12793
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13440
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5841
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-105924747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105924747
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105924747
    reference: chr 14
allele count: 4
allele frequency: 3.797444319972659e-5
allele num: 105334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.653+38G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.653+38G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.395+38G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.602+38G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.653+38G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.29+38G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.650+38G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*602+38G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19114
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9656
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5829
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6113
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8199
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

14-105926649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926649
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926649
    reference: chr 14
allele count: 1
allele frequency: 1.363400867122951e-5
allele num: 73346
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-46G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20653
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5860
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8831
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

14-105926651-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926651
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926651
    reference: chr 14
allele count: 70
allele frequency: 9.515782605149398e-4
allele num: 73562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-44C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-44C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-44C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-44C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-44C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-44C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-44C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-44C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20653
  bin: 1.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 19519
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 9.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 5808
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-105926652-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926652
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926652
    reference: chr 14
allele count: 2
allele frequency: 2.713409670592066e-5
allele num: 73708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-43C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-43C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-43C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-43C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-43C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-43C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-43C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-43C>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19497
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20619
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2996
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6529
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

14-105926652-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926652
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926652
    reference: chr 14
allele count: 1
allele frequency: 1.356704835296033e-5
allele num: 73708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-43C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-43C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-43C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-43C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-43C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-43C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-43C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-43C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19497
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6529
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

14-105926662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926662
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926662
    reference: chr 14
allele count: 3
allele frequency: 3.836513376643307e-5
allele num: 78196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-33C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16039
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15402
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17388
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

14-105926663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926663
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926663
    reference: chr 14
allele count: 3
allele frequency: 3.768465480856195e-5
allele num: 79608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-32G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-32G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-32G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-32G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-32G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-32G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-32G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-32G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17513
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/14-105926666-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926666
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926665
    reference: chr 14
allele count: 2
allele frequency: 2.410567929804262e-5
allele num: 82968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-28delC
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-28delC
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-28delC
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-28delC
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-28delC
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-28delC
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-28delC
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-28delC
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11398
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AC
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

14-105926667-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926667
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926665
    reference: chr 14
allele count: 1
allele frequency: 1.195200076492805e-5
allele num: 83668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-25_30-24delTG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-25_654-24delTG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-25_654-24delTG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-25_*603-24delTG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-25_654-24delTG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-25_603-24delTG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-25_396-24delTG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-25_651-24delTG
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16371
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: CTG
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

14-105926677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926677
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926677
    reference: chr 14
allele count: 1
allele frequency: 1.08705104791721e-5
allele num: 91992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-18C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-18C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-18C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-18C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-18C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-18C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-18C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-18C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13211
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

14-105926678-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926678
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926678
    reference: chr 14
allele count: 1
allele frequency: 1.070274204251129e-5
allele num: 93434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-17G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-17G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-17G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-17G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-17G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-17G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-17G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-17G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6154
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

14-105926686-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926686
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926686
    reference: chr 14
allele count: 1
allele frequency: 9.949852742179416e-6
allele num: 100504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.396-9T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.654-9T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.654-9T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*603-9T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.654-9T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.30-9T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.603-9T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.651-9T>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

14-105926698-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926698
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926698
    reference: chr 14
allele count: 1
allele frequency: 9.390200386876256e-6
allele num: 106494
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.657T>C
  hgvsp: ENST00000331320.7:c.657T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.399T>C
  hgvsp: ENST00000498644.1:c.399T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.657T>C
  hgvsp: ENST00000438610.1:c.657T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.657T>C
  hgvsp: ENST00000406191.1:c.657T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.33T>C
  hgvsp: ENST00000434050.1:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.654T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*606T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.606T>C
  hgvsp: ENST00000405646.1:c.606T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39389
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser219Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

14-105926710-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926710
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926710
    reference: chr 14
allele count: 2
allele frequency: 1.83496339248032e-5
allele num: 108994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*618C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.669C>T
  hgvsp: ENST00000438610.1:c.669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.45C>T
  hgvsp: ENST00000434050.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.669C>T
  hgvsp: ENST00000331320.7:c.669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.669C>T
  hgvsp: ENST00000406191.1:c.669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.411C>T
  hgvsp: ENST00000498644.1:c.411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.666C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.618C>T
  hgvsp: ENST00000405646.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44024
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe223Phe
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

14-105926737-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926737
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926737
    reference: chr 14
allele count: 4
allele frequency: 3.62476439031463e-5
allele num: 110352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.438C>T
  hgvsp: ENST00000498644.1:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.696C>T
  hgvsp: ENST00000438610.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.696C>T
  hgvsp: ENST00000406191.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.696C>T
  hgvsp: ENST00000331320.7:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.645C>T
  hgvsp: ENST00000405646.1:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.72C>T
  hgvsp: ENST00000434050.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.693C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*645C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37756
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser232Ser
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

14-105926738-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926738
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926738
    reference: chr 14
allele count: 1
allele frequency: 9.054362391800369e-6
allele num: 110444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*646G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.73G>A
  hgvsp: ENSP00000394106.1:p.Val25Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.697G>A
  hgvsp: ENSP00000385702.1:p.Val233Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.646G>A
  hgvsp: ENSP00000384180.1:p.Val216Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.439G>A
  hgvsp: ENSP00000448146.1:p.Val147Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.697G>A
  hgvsp: ENSP00000333633.7:p.Val233Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.697G>A
  hgvsp: ENSP00000393438.1:p.Val233Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.694G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37796
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3293
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val233Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP

14-105926742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926742
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926742
    reference: chr 14
allele count: 1
allele frequency: 9.078199611453057e-6
allele num: 110154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.701G>A
  hgvsp: ENSP00000385702.1:p.Arg234Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.77G>A
  hgvsp: ENSP00000394106.1:p.Arg26Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.698G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*650G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.650G>A
  hgvsp: ENSP00000384180.1:p.Arg217Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.701G>A
  hgvsp: ENSP00000333633.7:p.Arg234Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.443G>A
  hgvsp: ENSP00000448146.1:p.Arg148Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.701G>A
  hgvsp: ENSP00000393438.1:p.Arg234Gln
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37315
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6259
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg234Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

14-105926749-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926749
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926749
    reference: chr 14
allele count: 3
allele frequency: 2.748007694421545e-5
allele num: 109170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.84C>T
  hgvsp: ENST00000434050.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.705C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.657C>T
  hgvsp: ENST00000405646.1:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.450C>T
  hgvsp: ENST00000498644.1:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*657C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.708C>T
  hgvsp: ENST00000331320.7:c.708C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.708C>T
  hgvsp: ENST00000438610.1:c.708C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.708C>T
  hgvsp: ENST00000406191.1:c.708C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro236Pro
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

14-105926752-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926752
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926752
    reference: chr 14
allele count: 1
allele frequency: 9.196247930844215e-6
allele num: 108740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.453C>T
  hgvsp: ENST00000498644.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.708C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.660C>T
  hgvsp: ENST00000405646.1:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.87C>T
  hgvsp: ENST00000434050.1:c.87C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*660C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.711C>T
  hgvsp: ENST00000438610.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.711C>T
  hgvsp: ENST00000406191.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.711C>T
  hgvsp: ENST00000331320.7:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11109
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42457
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3286
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser237Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-105926757-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926757
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926757
    reference: chr 14
allele count: 1
allele frequency: 9.327836128574893e-6
allele num: 107206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.665A>C
  hgvsp: ENSP00000384180.1:p.His222Pro
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.716A>C
  hgvsp: ENSP00000333633.7:p.His239Pro
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.458A>C
  hgvsp: ENSP00000448146.1:p.His153Pro
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.716A>C
  hgvsp: ENSP00000393438.1:p.His239Pro
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*665A>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.713A>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.716A>C
  hgvsp: ENSP00000385702.1:p.His239Pro
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.92A>C
  hgvsp: ENSP00000394106.1:p.His31Pro
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9631
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His239Pro
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-105926761-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926761
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926761
    reference: chr 14
allele count: 1
allele frequency: 9.443227317367984e-6
allele num: 105896
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.720G>A
  hgvsp: ENSP00000333633.7:p.Met240Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*669G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.720G>A
  hgvsp: ENSP00000385702.1:p.Met240Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.717G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.462G>A
  hgvsp: ENSP00000448146.1:p.Met154Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.96G>A
  hgvsp: ENSP00000394106.1:p.Met32Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.669G>A
  hgvsp: ENSP00000384180.1:p.Met223Ile
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.720G>A
  hgvsp: ENSP00000393438.1:p.Met240Ile
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10042
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met240Ile
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

14-105926764-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926764
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926764
    reference: chr 14
allele count: 3
allele frequency: 2.85284999714715e-5
allele num: 105158
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.723C>T
  hgvsp: ENST00000331320.7:c.723C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.720C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.99C>T
  hgvsp: ENST00000434050.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.723C>T
  hgvsp: ENST00000406191.1:c.723C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.672C>T
  hgvsp: ENST00000405646.1:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.465C>T
  hgvsp: ENST00000498644.1:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.723C>T
  hgvsp: ENST00000438610.1:c.723C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*672C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36415
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser241Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

14-105926767-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926767
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926767
    reference: chr 14
allele count: 4
allele frequency: 3.823872435615548e-5
allele num: 104606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*675C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.726C>T
  hgvsp: ENST00000438610.1:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.726C>T
  hgvsp: ENST00000331320.7:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.675C>T
  hgvsp: ENST00000405646.1:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.102C>T
  hgvsp: ENST00000434050.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.723C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.726C>T
  hgvsp: ENST00000406191.1:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.468C>T
  hgvsp: ENST00000498644.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36138
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala242Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

14-105926779-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926779
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926779
    reference: chr 14
allele count: 10
allele frequency: 9.981235277677966e-5
allele num: 100188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*687C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.687C>T
  hgvsp: ENST00000405646.1:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.738C>T
  hgvsp: ENST00000331320.7:c.738C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.114C>T
  hgvsp: ENST00000434050.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.738C>T
  hgvsp: ENST00000406191.1:c.738C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.738C>T
  hgvsp: ENST00000438610.1:c.738C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.480C>T
  hgvsp: ENST00000498644.1:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.735C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26256
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10184
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16385
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser246Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-105926804-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926804
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926804
    reference: chr 14
allele count: 1
allele frequency: 1.202356618973188e-5
allele num: 83170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.129+10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.750+10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.495+10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.702+10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.753+10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.753+10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.753+10C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*702+10C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8139
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10586
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30556
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-105926811-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926811
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926811
    reference: chr 14
allele count: 4
allele frequency: 5.201560468140442e-5
allele num: 76900
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.702+17C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.750+17C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.753+17C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.753+17C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*702+17C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.753+17C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.129+17C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.495+17C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24937
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6560
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4731
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

14-105926812-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926812
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926812
    reference: chr 14
allele count: 48
allele frequency: 6.307987489158147e-4
allele num: 76094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.753+18G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.753+18G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.129+18G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.750+18G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.702+18G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.495+18G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*702+18G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.753+18G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25138
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17828
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3990
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 9.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

14-105926819-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926819
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926819
    reference: chr 14
allele count: 80
allele frequency: 1.137235948028317e-3
allele num: 70346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.753+25G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.753+25G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.495+25G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.753+25G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.702+25G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.750+25G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.129+25G>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*702+25G>C
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24694
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 19473
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5604
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 31209
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 9.75e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 2
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

14-105926831-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926831
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926831
    reference: chr 14
allele count: 2
allele frequency: 3.195194427580918e-5
allele num: 62594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.495+37G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.753+37G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.129+37G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.702+37G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*702+37G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.753+37G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.750+37G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.753+37G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5315
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5292
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

14-105926839-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105926839
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105926839
    reference: chr 14
allele count: 1
allele frequency: 1.861989349420921e-5
allele num: 53706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.753+45T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.129+45T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.702+45T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.753+45T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.495+45T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.750+45T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.753+45T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*702+45T>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18843
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9361
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19888
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum

14-105927053-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105927053
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105927053
    reference: chr 14
allele count: 1
allele frequency: 1.321912013536379e-5
allele num: 75648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.754-49G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.751-49G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.754-49G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.496-49G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.130-49G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*703-49G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.703-49G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.754-49G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17031
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9836
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3573
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

14-105927060-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105927060
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105927060
    reference: chr 14
allele count: 1
allele frequency: 1.307907609406472e-5
allele num: 76458
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.754-42A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.754-42A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.754-42A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.703-42A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.496-42A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.130-42A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.751-42A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*703-42A>G
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7212
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5092
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14646
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7248
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

14-105927073-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105927073
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105927073
    reference: chr 14
allele count: 1
allele frequency: 1.26579073947495e-5
allele num: 79002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*703-29C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.130-29C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.754-29C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.754-29C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.703-29C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.496-29C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.751-29C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.754-29C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13470
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

14-105927074-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105927074
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105927074
    reference: chr 14
allele count: 2
allele frequency: 2.531004808909137e-5
allele num: 79020
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.754-28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*703-28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.703-28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.754-28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.496-28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.130-28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.754-28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.751-28C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3517
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4601
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-105927075-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105927075
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105927075
    reference: chr 14
allele count: 1
allele frequency: 1.25281884239539e-5
allele num: 79820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.751-27G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.754-27G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.130-27G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.754-27G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.703-27G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.754-27G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.496-27G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*703-27G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2550
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16927
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4462
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5620
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

14-105927076-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105927076
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105927076
    reference: chr 14
allele count: 1
allele frequency: 1.238451440319025e-5
allele num: 80746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.130-26G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.703-26G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.754-26G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.754-26G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.754-26G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000411493
  ensembl transcript: ENST00000424723
  gene symbol: MTA1
  hgvsc: ENST00000424723.1:c.*703-26G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481012
  gene symbol: MTA1
  hgvsc: ENST00000481012.1:n.751-26G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000448146
  ensembl transcript: ENST00000498644
  gene symbol: MTA1
  hgvsc: ENST00000498644.1:c.496-26G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4972
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.86706497386109e-4
allele num: 16068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.384932e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 9.103999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.503e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.956e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5004
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.586999301720307e-5
allele num: 63012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.189e0

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.394966e6

QD
type: SiteQuality
SIO_000300: 1.422e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.191e0

VQSLOD
type: SiteQuality
SIO_000300: 7.69e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.777e0

GenotypeQuality
all individuals: 2247
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577983967682888e-5
allele num: 63372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6010
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.43e-1

QD
type: SiteQuality
SIO_000300: 1.369e1

FS
type: SiteQuality
SIO_000300: 8.895e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.735e0

DP
type: SiteQuality
SIO_000300: 1.406931e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
all individuals: 452
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45874
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1824
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 9.75e1
variant carriers: 47

GenotypeQuality
all individuals: 745
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 4.085801838610827e-4
allele num: 9790
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.302226935312832e-4
allele num: 11316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 5.948467486929025e-4
allele num: 63882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

DP
type: SiteQuality
SIO_000300: 1.424065e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.867e0

VQSLOD
type: SiteQuality
SIO_000300: 5.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.27e1

GenotypeQuality
all individuals: 1298
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5244
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.802816901408451e-5
allele num: 11360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.117595710188303e-5
allele num: 64152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 1.407e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

DP
type: SiteQuality
SIO_000300: 1.432727e6

MQRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

QD
type: SiteQuality
SIO_000300: 1.387e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.16e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46783
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5271
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.112452924149522e-5
allele num: 64258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

QD
type: SiteQuality
SIO_000300: 1.362e1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

DP
type: SiteQuality
SIO_000300: 1.436456e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 1.151e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47247
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.100486776423899e-5
allele num: 64506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.58e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.795e0

FS
type: SiteQuality
SIO_000300: 5.988e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

DP
type: SiteQuality
SIO_000300: 1.442566e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 751
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5347
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216397031991242e-4
allele num: 16442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 3.568e0

QD
type: SiteQuality
SIO_000300: 8.65e0

VQSLOD
type: SiteQuality
SIO_000300: 3.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

DP
type: SiteQuality
SIO_000300: 1.448328e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
all individuals: 129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1284
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 306
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.003606491685033e-4
allele num: 9982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54206760424377e-5
allele num: 64848
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

DP
type: SiteQuality
SIO_000300: 1.452434e6

FS
type: SiteQuality
SIO_000300: 4.279e0

VQSLOD
type: SiteQuality
SIO_000300: 9.370000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.182e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.301e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-1

GenotypeQuality
all individuals: 1329
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541639687972127e-5
allele num: 64866
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.26e0

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.45292e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.59e-1

GenotypeQuality
all individuals: 747
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541022005794243e-5
allele num: 64892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.215e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.493e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

QD
type: SiteQuality
SIO_000300: 1.059e1

DP
type: SiteQuality
SIO_000300: 1.453314e6

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47831
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.049195616693868e-3
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64930
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

FS
type: SiteQuality
SIO_000300: 1.792e0

QD
type: SiteQuality
SIO_000300: 9.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.454559e6

GenotypeQuality
all individuals: 1008
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 338
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variant carriers: 0

GenotypeQuality
all individuals: 1328
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variant carriers: 0

GenotypeQuality
all individuals: 5412
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 47798
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.994003597841295e-5
allele num: 10006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.141e0

QD
type: SiteQuality
SIO_000300: 9.08e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.636e-1

DP
type: SiteQuality
SIO_000300: 1.45473e6

GenotypeQuality
all individuals: 1280
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1016
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539693293096015e-5
allele num: 64948
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.455133e6

FS
type: SiteQuality
SIO_000300: 1.227e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
SIO_000300: 1.185e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.873e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.24e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

FS
type: SiteQuality
SIO_000300: 1.974e0

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

DP
type: SiteQuality
SIO_000300: 1.456965e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

GenotypeQuality
all individuals: 47750
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 2.25e1
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GenotypeQuality
all individuals: 1316
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
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GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.079765937788728e-5
allele num: 64940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 1.974e0

DP
type: SiteQuality
SIO_000300: 1.456965e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

GenotypeQuality
all individuals: 1320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
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GenotypeQuality
all individuals: 730
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47756
bin: 6.25e1
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GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1095
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540167570231641e-5
allele num: 64928
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.455316e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.487e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.68e-1

QD
type: SiteQuality
SIO_000300: 6.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 1159
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1313
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.703448063353157e-5
allele num: 64906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.749841671944268e-4
allele num: 6316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-2

DP
type: SiteQuality
SIO_000300: 1.454243e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 6.113e0

QD
type: SiteQuality
SIO_000300: 1.098e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.925e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47610
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

South Asian
type: Population
allele count: 29
allele frequency: 1.765923760808671e-3
allele num: 16422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 1.45452e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

QD
type: SiteQuality
SIO_000300: 1.013e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1278
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541354542371836e-5
allele num: 64878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

QD
type: SiteQuality
SIO_000300: 5.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

DP
type: SiteQuality
SIO_000300: 1.452529e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

VQSLOD
type: SiteQuality
SIO_000300: -1.408e0

FS
type: SiteQuality
SIO_000300: 1.614e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 242
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5261
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variant carriers: 0

GenotypeQuality
all individuals: 46869
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.834305717619603e-4
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546359868868683e-5
allele num: 64668
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

FS
type: SiteQuality
SIO_000300: 2.033e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

DP
type: SiteQuality
SIO_000300: 1.446116e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

QD
type: SiteQuality
SIO_000300: 1.28e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
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GenotypeQuality
all individuals: 46869
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
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variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64668
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.0517578125e-4
allele num: 16384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.033e0

QD
type: SiteQuality
SIO_000300: 1.28e1

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

DP
type: SiteQuality
SIO_000300: 1.446116e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 164
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GenotypeQuality
all individuals: 1287
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5264
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GenotypeQuality
all individuals: 722
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.751006828926633e-4
allele num: 11422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.442539e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

FS
type: SiteQuality
SIO_000300: 3.533e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

QD
type: SiteQuality
SIO_000300: 1.562e1

MQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
all individuals: 1254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 36
bin: 1.25e1
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GenotypeQuality
all individuals: 718
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GenotypeQuality
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GenotypeQuality
all individuals: 245
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GenotypeQuality
all individuals: 1277
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variant carriers: 1

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5152
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556323341737479e-5
allele num: 64254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9848
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 2.649e0

DP
type: SiteQuality
SIO_000300: 1.426718e6

VQSLOD
type: SiteQuality
SIO_000300: -7.476e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.566e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.39e-1

QD
type: SiteQuality
SIO_000300: 1.679e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.84e-1

GenotypeQuality
all individuals: 271
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
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GenotypeQuality
all individuals: 40791
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GenotypeQuality
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GenotypeQuality
all individuals: 1190
bin: 2.75e1
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GenotypeQuality
all individuals: 74
bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1286
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 703
bin: 3.75e1
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GenotypeQuality
all individuals: 497
bin: 5.25e1
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GenotypeQuality
all individuals: 296
bin: 8.75e1
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GenotypeQuality
all individuals: 346
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.032204789430223e-3
allele num: 9688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.580627825372238e-5
allele num: 63266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16064
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.747e0

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

DP
type: SiteQuality
SIO_000300: 1.382442e6

QD
type: SiteQuality
SIO_000300: 1.332e1

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9536
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62354
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.28693574751666e-5
allele num: 15906
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 15906
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.60374635147705e-5
allele num: 62354
num of homozygotes: 0

FS
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9518
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 5792
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.605445671718469e-5
allele num: 62288
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 15880
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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QD
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MQ
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DP
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8216
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European (Finnish)
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allele num: 5738
num of homozygotes: 0

African
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 20
allele frequency: 3.233943470668133e-4
allele num: 61844
num of homozygotes: 0

DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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FS
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QD
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MQRankSum
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ClippingRankSum
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SIO_000300: -1.54e-1

MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 5.18e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 18
allele frequency: 1.137944114300164e-3
allele num: 15818
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.216841080554879e-4
allele num: 8218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5744
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61872
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.30257e6

MQRankSum
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MQ
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -3.259e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 4
allele frequency: 3.720930232558139e-4
allele num: 10750
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5724
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15788
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61638
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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MQ
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5724
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 61638
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African
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Other
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MQ
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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FS
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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InbreedingCoeff
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 15340
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9082
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.978630787495053e-4
allele num: 10108
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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MQ
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DP
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8958
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.729744689683803e-5
allele num: 57812
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.971608832807571e-4
allele num: 15216
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
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BaseQRankSum
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SIO_000300: -2.137e0

VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2786
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6940
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 1.313025210084034e-4
allele num: 7616
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.62392e5

QD
type: SiteQuality
SIO_000300: 1.67e1

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

VQSLOD
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BaseQRankSum
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SIO_000300: -1.377e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.531e0

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

African
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allele count: 3
allele frequency: 4.316546762589928e-4
allele num: 6950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 63
allele frequency: 1.440988106129918e-3
allele num: 43720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
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European (Finnish)
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allele count: 4
allele frequency: 1.436781609195402e-3
allele num: 2784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7620
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.53e0

DP
type: SiteQuality
SIO_000300: 7.70813e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.032e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.283417819792666e-5
allele num: 43794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2780
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.763668430335097e-4
allele num: 5670
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.457e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.408e0

VQSLOD
type: SiteQuality
SIO_000300: 5.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.054e1

DP
type: SiteQuality
SIO_000300: 7.76033e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43794
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2780
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.763668430335097e-4
allele num: 5670
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.51e-1

QD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6922
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7240
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 6.494349915573451e-5
allele num: 46194
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 516
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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QD
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 7058
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 4.865390853065196e-4
allele num: 6166
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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DP
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QD
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FS
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
type: Population
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East Asian
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African
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.088307440719542e-5
allele num: 48920
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3300
num of homozygotes: 0

MQRankSum
type: SiteQuality
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FS
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ReadPosRankSum
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VQSLOD
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QD
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ClippingRankSum
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DP
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InbreedingCoeff
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 562
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.029056083110137e-5
allele num: 49284
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.896e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -1.288e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

QD
type: SiteQuality
SIO_000300: 1.687e1

DP
type: SiteQuality
SIO_000300: 9.85755e5

GenotypeQuality
all individuals: 1437
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.86171203038314e-5
allele num: 53714
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.101559e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.425e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

QD
type: SiteQuality
SIO_000300: 2.464e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

FS
type: SiteQuality
SIO_000300: 1.1738e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.894e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8968
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.217433649866082e-4
allele num: 8214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7190
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.966e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 1.125538e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.043e0

QD
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: -2.472e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.728429203539823e-5
allele num: 57856
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.336e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

VQSLOD
type: SiteQuality
SIO_000300: 2.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.196536e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 321
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8020
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60268
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.547450830628223e-5
allele num: 10474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9146
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

QD
type: SiteQuality
SIO_000300: 2.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.466e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.260692e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.752e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8126
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.134703196347032e-5
allele num: 14016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.635643953024306e-5
allele num: 61138
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.479e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.29e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e-1

FS
type: SiteQuality
SIO_000300: 7.085e0

VQSLOD
type: SiteQuality
SIO_000300: 6.26e-1

DP
type: SiteQuality
SIO_000300: 1.287891e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5146
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.76223965377333e-5
allele num: 14788
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.080146899978397e-4
allele num: 9258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.254996419503939e-5
allele num: 61444
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.23e-1

DP
type: SiteQuality
SIO_000300: 1.303481e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

FS
type: SiteQuality
SIO_000300: 6.92e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.17e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10730
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South Asian
type: Population
allele count: 1
allele frequency: 6.750371270419872e-5
allele num: 14814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5164
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.925e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.115e0

DP
type: SiteQuality
SIO_000300: 1.304546e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10684
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.62999185004075e-5
allele num: 61350
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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Other
type: Population
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.49e0

BaseQRankSum
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 351
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 3
allele frequency: 3.26726203441516e-4
allele num: 9182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8106
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.29082e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.154e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 4.174e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

QD
type: SiteQuality
SIO_000300: 1.682e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

GenotypeQuality
all individuals: 639
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7958
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.648206751054852e-5
allele num: 60672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.28454e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

FS
type: SiteQuality
SIO_000300: 1.2357e1

VQSLOD
type: SiteQuality
SIO_000300: -2.13e0

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.738e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.34e-1

GenotypeQuality
all individuals: 696
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3042
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 456
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39784
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.668001067520683e-5
allele num: 59952
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 5.041e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

VQSLOD
type: SiteQuality
SIO_000300: 4.07e-1

DP
type: SiteQuality
SIO_000300: 1.255126e6

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 699
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 798
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10919
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.074136955291455e-5
allele num: 14136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59292
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

FS
type: SiteQuality
SIO_000300: 4.301e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: -3.264e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.873e0

QD
type: SiteQuality
SIO_000300: 3.09e0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-2

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.144e0

DP
type: SiteQuality
SIO_000300: 1.231421e6

GenotypeQuality
all individuals: 605
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11579
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.69664065151001e-5
allele num: 58940
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.135721421435707e-5
allele num: 14014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.976057462090982e-5
allele num: 10024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4820
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.220571e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.53e-1

FS
type: SiteQuality
SIO_000300: 1.888e0

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.1e-1

QD
type: SiteQuality
SIO_000300: 9.82e0

GenotypeQuality
all individuals: 735
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12217
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 861
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.116485315687144e-5
allele num: 58634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7778
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.160246312473149e-5
allele num: 13966
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4768
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.210831e6

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

FS
type: SiteQuality
SIO_000300: 1.032e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.18e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

GenotypeQuality
all individuals: 1784
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 913
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2055
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31550
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.195219123505976e-3
allele num: 7530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.515406583496167e-5
allele num: 13306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.42e-1

DP
type: SiteQuality
SIO_000300: 1.14549e6

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 1.119e1

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.12e0

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1773
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4739
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 199
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10948
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.6e-4
allele num: 6250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7302
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 8.56497e5

QD
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: -3.882e0

MQRankSum
type: SiteQuality
SIO_000300: -1.493e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.53e-1

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32013
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 9.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.548762736535663e-5
allele num: 43968
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5770
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.00160128102482e-4
allele num: 9992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.80877e5

QD
type: SiteQuality
SIO_000300: 8.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 1.288e0

VQSLOD
type: SiteQuality
SIO_000300: 2.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 285
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 513
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1914
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3192
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.008064516129032e-4
allele num: 9920
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 47
allele frequency: 1.080459770114942e-3
allele num: 43500
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.14e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

DP
type: SiteQuality
SIO_000300: 7.69482e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.645e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 322
bin: 4.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40476
num of homozygotes: 0

South Asian
type: Population
allele count: 36
allele frequency: 3.955174686882004e-3
allele num: 9102
num of homozygotes: 1

East Asian
type: Population
allele count: 37
allele frequency: 7.047619047619047e-3
allele num: 5250
num of homozygotes: 1

Other
type: Population
allele count: 3
allele frequency: 5.905511811023622e-3
allele num: 508
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.083564600678384e-4
allele num: 6486
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.522367030644593e-4
allele num: 5678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2846
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.22e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 2.809e0

DP
type: SiteQuality
SIO_000300: 7.16065e5

QD
type: SiteQuality
SIO_000300: 1.374e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 1929
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36258
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.453385672227674e-4
allele num: 8152
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e0

DP
type: SiteQuality
SIO_000300: 6.60993e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.938e0

QD
type: SiteQuality
SIO_000300: 1.642e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
SIO_000300: -1.382e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.81e-2

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 647
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2385
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.644103648863035e-4
allele num: 3782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7114
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.254e1

VQSLOD
type: SiteQuality
SIO_000300: 8.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.23e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.33308e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4298
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GenotypeQuality
all individuals: 12160
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.180359323216466e-5
allele num: 45864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4018
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.775e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.01363e5

QD
type: SiteQuality
SIO_000300: 8.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.142e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3618
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.160480490861167e-5
allele num: 46286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4094
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.355e0

QD
type: SiteQuality
SIO_000300: 1.592e1

VQSLOD
type: SiteQuality
SIO_000300: -1.659e0

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

DP
type: SiteQuality
SIO_000300: 8.23861e5

MQ
type: SiteQuality
SIO_000300: 5.777e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.099781622711238e-5
allele num: 47624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
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ReadPosRankSum
type: SiteQuality
SIO_000300: -6.35e-1

DP
type: SiteQuality
SIO_000300: 9.05406e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

FS
type: SiteQuality
SIO_000300: 7.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 1.411e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

VQSLOD
type: SiteQuality
SIO_000300: -4.908e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.164e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5951
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
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East Asian
type: Population
allele count: 1
allele frequency: 1.688048615800135e-4
allele num: 5924
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.522533495736906e-4
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.082e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

FS
type: SiteQuality
SIO_000300: 1.1014e1

DP
type: SiteQuality
SIO_000300: 9.18259e5

QD
type: SiteQuality
SIO_000300: 1.325e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.141e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.11e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 517
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.679543164259321e-4
allele num: 5954
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6704
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48036
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4310
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.48e-1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.897e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.36806e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3