7-127990977-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127990977
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127990977
    reference: chr 7
allele count: 2
allele frequency: 1.25281884239539e-4
allele num: 15964
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2633A>G
  hgvsp: ENSP00000415026.2:p.Glu878Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*309A>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2633A>G
  hgvsp: ENSP00000445239.1:p.Glu878Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1220A>G
  hgvsp: ENSP00000417878.1:p.Ser408Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.2015A>G
  hgvsp: ENSP00000410779.1:p.Glu672Gly
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4642
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2963
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu878Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

7-127991014-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991014
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991014
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 16116
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1183G>C
  hgvsp: ENST00000480290.1:c.1183G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*272G>C
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1978G>C
  hgvsp: ENSP00000410779.1:p.Ala660Pro
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2596G>C
  hgvsp: ENSP00000445239.1:p.Ala866Pro
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2596G>C
  hgvsp: ENSP00000415026.2:p.Ala866Pro
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3768
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4685
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala866Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

7-127991055-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991055
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991055
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 15694
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2555A>T
  hgvsp: ENSP00000415026.2:p.Tyr852Phe
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1142A>T
  hgvsp: ENSP00000417878.1:p.Thr382Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*231A>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1937A>T
  hgvsp: ENSP00000410779.1:p.Tyr646Phe
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2555A>T
  hgvsp: ENSP00000445239.1:p.Tyr852Phe
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5144
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr852Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-127991090-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991090
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991090
    reference: chr 7
allele count: 240
allele frequency: 1.632430961773908e-2
allele num: 14702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2520A>G
  hgvsp: ENST00000535159.1:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*196A>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2520A>G
  hgvsp: ENST00000446477.2:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1902A>G
  hgvsp: ENST00000435512.1:c.1902A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1107A>G
  hgvsp: ENSP00000417878.1:p.Gln370Arg
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 2.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5923
  bin: 2.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 7.5e0
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5331
  bin: 7.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 9.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 2.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.25e1
  variant carriers: 6
hgvs: p.Gln370Arg
num of homozygotes: 15
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-127991094-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991094
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991094
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 14530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1103C>T
  hgvsp: ENSP00000417878.1:p.Pro369Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1898C>T
  hgvsp: ENSP00000410779.1:p.Pro633Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2516C>T
  hgvsp: ENSP00000415026.2:p.Pro839Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2516C>T
  hgvsp: ENSP00000445239.1:p.Pro839Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*192C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5524
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro839Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

7-127991116-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991116
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991116
    reference: chr 7
allele count: 49
allele frequency: 3.432333987111236e-3
allele num: 14276
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2494T>C
  hgvsp: ENSP00000415026.2:p.Cys832Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2494T>C
  hgvsp: ENSP00000445239.1:p.Cys832Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*170T>C
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1081T>C
  hgvsp: ENST00000480290.1:c.1081T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1876T>C
  hgvsp: ENSP00000410779.1:p.Cys626Arg
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6027
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys832Arg
num of homozygotes: 1
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-127991130-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991130
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991130
    reference: chr 7
allele count: 1
allele frequency: 7.093204709887927e-5
allele num: 14098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*156G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2480G>T
  hgvsp: ENSP00000445239.1:p.Arg827Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2480G>T
  hgvsp: ENSP00000415026.2:p.Arg827Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1862G>T
  hgvsp: ENSP00000410779.1:p.Arg621Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1067G>T
  hgvsp: ENSP00000417878.1:p.Ala357Ser
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5799
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5513
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3348
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg827Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

7-127991133-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991133
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991133
    reference: chr 7
allele count: 8007
allele frequency: 5.589919017034348e-1
allele num: 14324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1859C>T
  hgvsp: ENSP00000410779.1:p.Pro620Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2477C>T
  hgvsp: ENSP00000415026.2:p.Pro826Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2477C>T
  hgvsp: ENSP00000445239.1:p.Pro826Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1064C>T
  hgvsp: ENSP00000417878.1:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*153C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 2.5e0
  variant carriers: 1176
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 288
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.25e1
  variant carriers: 588
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 536
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 534
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.75e1
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 490
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 382
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.25e1
  variant carriers: 398
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 496
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 321
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 7.5e0
  variant carriers: 1079
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.25e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 182
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 2.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 6.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 108
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 7.5e0
  variant carriers: 735
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.75e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 1.75e1
  variant carriers: 375
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 9.25e1
  variant carriers: 81
hgvs: p.Pro826Leu
num of homozygotes: 2312
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

7-127991140-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991140
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991140
    reference: chr 7
allele count: 1
allele frequency: 7.49063670411985e-5
allele num: 13350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1057A>G
  hgvsp: ENST00000480290.1:c.1057A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*146A>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2470A>G
  hgvsp: ENSP00000415026.2:p.Arg824Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2470A>G
  hgvsp: ENSP00000445239.1:p.Arg824Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1852A>G
  hgvsp: ENSP00000410779.1:p.Arg618Gly
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5616
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg824Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-127991152-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991152
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991152
    reference: chr 7
allele count: 1
allele frequency: 7.587253414264036e-5
allele num: 13180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*134T>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2458T>G
  hgvsp: ENSP00000445239.1:p.Ser820Ala
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1840T>G
  hgvsp: ENSP00000410779.1:p.Ser614Ala
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2458T>G
  hgvsp: ENSP00000415026.2:p.Ser820Ala
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1045T>G
  hgvsp: ENST00000480290.1:c.1045T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5457
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser820Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-127991152-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991152
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991152
    reference: chr 7
allele count: 1
allele frequency: 7.587253414264036e-5
allele num: 13180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*134T>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1840T>A
  hgvsp: ENSP00000410779.1:p.Ser614Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1045T>A
  hgvsp: ENST00000480290.1:c.1045T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2458T>A
  hgvsp: ENSP00000445239.1:p.Ser820Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2458T>A
  hgvsp: ENSP00000415026.2:p.Ser820Thr
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5457
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser820Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

7-127991178-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991178
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991178
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 12794
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2432G>A
  hgvsp: ENSP00000445239.1:p.Arg811Gln
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1019G>A
  hgvsp: ENSP00000417878.1:p.Gly341Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1814G>A
  hgvsp: ENSP00000410779.1:p.Arg605Gln
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2432G>A
  hgvsp: ENSP00000415026.2:p.Arg811Gln
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*108G>A
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg811Gln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

7-127991183-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991183
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991183
    reference: chr 7
allele count: 1
allele frequency: 7.840677434530344e-5
allele num: 12754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1809C>T
  hgvsp: ENST00000435512.1:c.1809C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1014C>T
  hgvsp: ENSP00000417878.1:p.Ser339Phe
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2427C>T
  hgvsp: ENST00000446477.2:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*103C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2427C>T
  hgvsp: ENST00000535159.1:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3884
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser339Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-127991189-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991189
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991189
    reference: chr 7
allele count: 4
allele frequency: 3.15357931251971e-4
allele num: 12684
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2421C>T
  hgvsp: ENST00000446477.2:c.2421C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1008C>T
  hgvsp: ENSP00000417878.1:p.Ala337Val
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1803C>T
  hgvsp: ENST00000435512.1:c.1803C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*97C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2421C>T
  hgvsp: ENST00000535159.1:c.2421C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3658
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Ala337Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/7-127991195-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991195
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991195
    reference: chr 7
allele count: 9
allele frequency: 7.121379965184365e-4
allele num: 12638
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2415G>T
  hgvsp: ENST00000446477.2:c.2415G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1002G>T
  hgvsp: ENSP00000417878.1:p.Arg335Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2415G>T
  hgvsp: ENST00000535159.1:c.2415G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*91G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1797G>T
  hgvsp: ENST00000435512.1:c.1797G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg335Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

7-127991195-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991195
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991195
    reference: chr 7
allele count: 3
allele frequency: 2.373793321728121e-4
allele num: 12638
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2415G>C
  hgvsp: ENST00000446477.2:c.2415G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2415G>C
  hgvsp: ENST00000535159.1:c.2415G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1002G>C
  hgvsp: ENSP00000417878.1:p.Arg335Pro
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*91G>C
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1797G>C
  hgvsp: ENST00000435512.1:c.1797G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4138
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg335Pro
num of homozygotes: 1
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

7-127991196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991196
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991196
    reference: chr 7
allele count: 1
allele frequency: 7.954183900731785e-5
allele num: 12572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1796C>T
  hgvsp: ENSP00000410779.1:p.Ser599Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2414C>T
  hgvsp: ENSP00000415026.2:p.Ser805Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2414C>T
  hgvsp: ENSP00000445239.1:p.Ser805Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.1001C>T
  hgvsp: ENSP00000417878.1:p.Arg335Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*90C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3613
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4101
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser805Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-127991198-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991198
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991198
    reference: chr 7
allele count: 1
allele frequency: 7.94912559618442e-5
allele num: 12580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*88C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2412C>T
  hgvsp: ENST00000446477.2:c.2412C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.999C>T
  hgvsp: ENSP00000417878.1:p.Ala334Val
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2412C>T
  hgvsp: ENST00000535159.1:c.2412C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1794C>T
  hgvsp: ENST00000435512.1:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3760
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala334Val
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

7-127991205-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991205
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991205
    reference: chr 7
allele count: 2
allele frequency: 1.602820964898221e-4
allele num: 12478
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*81C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1787C>T
  hgvsp: ENSP00000410779.1:p.Ser596Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2405C>T
  hgvsp: ENSP00000415026.2:p.Ser802Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.992C>T
  hgvsp: ENSP00000417878.1:p.His332Tyr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2405C>T
  hgvsp: ENSP00000445239.1:p.Ser802Leu
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3514
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ser802Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

7-127991262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991262
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991262
    reference: chr 7
allele count: 463
allele frequency: 3.934398368456832e-2
allele num: 11768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.935C>T
  hgvsp: ENSP00000417878.1:p.Pro313Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2348C>T
  hgvsp: ENSP00000415026.2:p.Pro783Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1730C>T
  hgvsp: ENSP00000410779.1:p.Pro577Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2348C>T
  hgvsp: ENSP00000445239.1:p.Pro783Leu
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 2.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 7.5e0
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 2.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 9.75e1
  variant carriers: 430
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 6.75e1
  variant carriers: 5
hgvs: p.Pro783Leu
num of homozygotes: 13
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

7-127991298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991298
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991298
    reference: chr 7
allele count: 1
allele frequency: 8.45880561664693e-5
allele num: 11822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1278G>A
  hgvsp: ENST00000489835.2:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.899G>A
  hgvsp: ENSP00000417878.1:p.Ala301Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2312G>A
  hgvsp: ENSP00000415026.2:p.Gly771Asp
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2312G>A
  hgvsp: ENSP00000445239.1:p.Gly771Asp
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1694G>A
  hgvsp: ENSP00000410779.1:p.Gly565Asp
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly771Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff

7-127991327-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991327
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991327
    reference: chr 7
allele count: 1
allele frequency: 8.140670791273201e-5
allele num: 12284
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.870C>G
  hgvsp: ENSP00000417878.1:p.Ser291Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2283C>G
  hgvsp: ENST00000535159.1:c.2283C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1249C>G
  hgvsp: ENSP00000419296.2:p.Leu417Val
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1665C>G
  hgvsp: ENST00000435512.1:c.1665C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2283C>G
  hgvsp: ENST00000446477.2:c.2283C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4572
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4128
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser291Cys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

7-127991330-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991330
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991330
    reference: chr 7
allele count: 1
allele frequency: 8.118201006656925e-5
allele num: 12318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.867A>G
  hgvsp: ENSP00000417878.1:p.Asp290Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1662A>G
  hgvsp: ENST00000435512.1:c.1662A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2280A>G
  hgvsp: ENST00000446477.2:c.2280A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1246A>G
  hgvsp: ENSP00000419296.2:p.Thr416Ala
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2280A>G
  hgvsp: ENST00000535159.1:c.2280A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp290Gly
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

7-127991340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991340
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991340
    reference: chr 7
allele count: 7
allele frequency: 5.595523581135092e-4
allele num: 12510
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2270C>T
  hgvsp: ENSP00000445239.1:p.Pro757Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.857C>T
  hgvsp: ENST00000480290.1:c.857C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1652C>T
  hgvsp: ENSP00000410779.1:p.Pro551Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1236C>T
  hgvsp: ENST00000489835.2:c.1236C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2270C>T
  hgvsp: ENSP00000415026.2:p.Pro757Leu
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3910
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro757Leu
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum

7-127991346-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991346
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991346
    reference: chr 7
allele count: 1
allele frequency: 7.907638779060572e-5
allele num: 12646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1646C>G
  hgvsp: ENSP00000410779.1:p.Ala549Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.851C>G
  hgvsp: ENSP00000417878.1:p.Leu285Val
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2264C>G
  hgvsp: ENSP00000415026.2:p.Ala755Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1230C>G
  hgvsp: ENST00000489835.2:c.1230C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2264C>G
  hgvsp: ENSP00000445239.1:p.Ala755Gly
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3838
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4771
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala755Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

7-127991380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991380
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991380
    reference: chr 7
allele count: 1
allele frequency: 7.538067239559776e-5
allele num: 13266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2230C>T
  hgvsp: ENSP00000445239.1:p.Pro744Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.817C>T
  hgvsp: ENST00000480290.1:c.817C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1612C>T
  hgvsp: ENSP00000410779.1:p.Pro538Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2230C>T
  hgvsp: ENSP00000415026.2:p.Pro744Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1196C>T
  hgvsp: ENSP00000419296.2:p.Ala399Val
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4974
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro744Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

7-127991389-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991389
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991389
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 13294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2221C>T
  hgvsp: ENST00000535159.1:c.2221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2221C>T
  hgvsp: ENST00000446477.2:c.2221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.808C>T
  hgvsp: ENST00000480290.1:c.808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1187C>T
  hgvsp: ENSP00000419296.2:p.Pro396Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1603C>T
  hgvsp: ENST00000435512.1:c.1603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4902
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3671
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro396Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

7-127991389-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991389
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991389
    reference: chr 7
allele count: 1
allele frequency: 7.522190461862494e-5
allele num: 13294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2221C>A
  hgvsp: ENSP00000445239.1:p.Leu741Met
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1187C>A
  hgvsp: ENSP00000419296.2:p.Pro396His
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2221C>A
  hgvsp: ENSP00000415026.2:p.Leu741Met
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.808C>A
  hgvsp: ENST00000480290.1:c.808C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1603C>A
  hgvsp: ENSP00000410779.1:p.Leu535Met
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4902
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu741Met
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ

7-127991403-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991403
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991403
    reference: chr 7
allele count: 1
allele frequency: 7.606876616461281e-5
allele num: 13146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.794T>A
  hgvsp: ENSP00000417878.1:p.Ser266Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2207T>A
  hgvsp: ENSP00000415026.2:p.Leu736His
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1173T>A
  hgvsp: ENST00000489835.2:c.1173T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2207T>A
  hgvsp: ENSP00000445239.1:p.Leu736His
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1589T>A
  hgvsp: ENSP00000410779.1:p.Leu530His
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4674
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu736His
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

7-127991467-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991467
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991467
    reference: chr 7
allele count: 1
allele frequency: 1.041666666666667e-4
allele num: 9600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.730G>A
  hgvsp: ENST00000480290.1:c.730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2143G>A
  hgvsp: ENSP00000415026.2:p.Asp715Asn
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1109G>A
  hgvsp: ENSP00000419296.2:p.Arg370Gln
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1525G>A
  hgvsp: ENSP00000410779.1:p.Asp509Asn
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2143G>A
  hgvsp: ENSP00000445239.1:p.Asp715Asn
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 184
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4040
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 4614
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 1338
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp715Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

7-127991489-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991489
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991489
    reference: chr 7
allele count: 1
allele frequency: 1.317870321560359e-4
allele num: 7588
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2121C>T
  hgvsp: ENST00000446477.2:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.708C>T
  hgvsp: ENSP00000417878.1:p.Pro237Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1503C>T
  hgvsp: ENST00000435512.1:c.1503C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-21C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2121C>T
  hgvsp: ENST00000535159.1:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3765
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 597
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3545
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro237Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP

7-127991493-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991493
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991493
    reference: chr 7
allele count: 3
allele frequency: 4.046398705152414e-4
allele num: 7414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1499C>G
  hgvsp: ENSP00000410779.1:p.Pro500Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2117C>G
  hgvsp: ENSP00000415026.2:p.Pro706Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2117C>G
  hgvsp: ENSP00000445239.1:p.Pro706Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-25C>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.704C>G
  hgvsp: ENSP00000417878.1:p.Arg236Gly
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4539
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro706Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

7-127991505-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991505
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991505
    reference: chr 7
allele count: 1
allele frequency: 1.499250374812594e-4
allele num: 6670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-37C>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2105C>G
  hgvsp: ENSP00000445239.1:p.Ala702Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1487C>G
  hgvsp: ENSP00000410779.1:p.Ala496Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.692C>G
  hgvsp: ENSP00000417878.1:p.Pro232Ala
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2105C>G
  hgvsp: ENSP00000415026.2:p.Ala702Gly
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3391
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4385
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala702Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/7-127991507-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991507
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991507
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 6548
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2103G>T
  hgvsp: ENST00000446477.2:c.2103G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2103G>T
  hgvsp: ENST00000535159.1:c.2103G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.690G>T
  hgvsp: ENSP00000417878.1:p.Arg231Leu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1485G>T
  hgvsp: ENST00000435512.1:c.1485G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-39G>T
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg231Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

7-127991571-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991571
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991571
    reference: chr 7
allele count: 2
allele frequency: 4.480286738351254e-4
allele num: 4464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-103T>C
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.626T>C
  hgvsp: ENSP00000417878.1:p.Trp210Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2039T>C
  hgvsp: ENSP00000445239.1:p.Leu680Pro
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1421T>C
  hgvsp: ENSP00000410779.1:p.Leu474Pro
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2039T>C
  hgvsp: ENSP00000415026.2:p.Leu680Pro
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu680Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: A
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

7-127991591-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991591
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991591
    reference: chr 7
allele count: 1
allele frequency: 2.662406815761449e-4
allele num: 3756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1401G>A
  hgvsp: ENST00000435512.1:c.1401G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-123G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2019G>A
  hgvsp: ENST00000535159.1:c.2019G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2019G>A
  hgvsp: ENST00000446477.2:c.2019G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.606G>A
  hgvsp: ENSP00000417878.1:p.Ser203Asn
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4560
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser203Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

7-127991602-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991602
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991602
    reference: chr 7
allele count: 1
allele frequency: 2.644103648863035e-4
allele num: 3782
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.2008G>A
  hgvsp: ENSP00000415026.2:p.Gly670Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1390G>A
  hgvsp: ENSP00000410779.1:p.Gly464Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.2008G>A
  hgvsp: ENSP00000445239.1:p.Gly670Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-134G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.595G>A
  hgvsp: ENST00000480290.1:c.595G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2830
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly670Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

7-127991614-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991614
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991614
    reference: chr 7
allele count: 1
allele frequency: 2.56278831368529e-4
allele num: 3902
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1996G>A
  hgvsp: ENSP00000415026.2:p.Ala666Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1378G>A
  hgvsp: ENSP00000410779.1:p.Ala460Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-146G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1996G>A
  hgvsp: ENSP00000445239.1:p.Ala666Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.583G>A
  hgvsp: ENST00000480290.1:c.583G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4011
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala666Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

7-127991658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991658
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991658
    reference: chr 7
allele count: 1
allele frequency: 1.651254953764861e-4
allele num: 6056
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1952G>A
  hgvsp: ENSP00000415026.2:p.Gly651Glu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1952G>A
  hgvsp: ENSP00000445239.1:p.Gly651Glu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.539G>A
  hgvsp: ENSP00000417878.1:p.Glu181Lys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1334G>A
  hgvsp: ENSP00000410779.1:p.Gly445Glu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-190G>A
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3035
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly651Glu
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

7-127991661-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991661
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991661
    reference: chr 7
allele count: 1
allele frequency: 1.608234158893535e-4
allele num: 6218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-193C>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1949C>G
  hgvsp: ENSP00000415026.2:p.Pro650Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.536C>G
  hgvsp: ENSP00000417878.1:p.Arg180Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1949C>G
  hgvsp: ENSP00000445239.1:p.Pro650Arg
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1331C>G
  hgvsp: ENSP00000410779.1:p.Pro444Arg
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro650Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

7-127991676-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991676
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991676
    reference: chr 7
allele count: 1
allele frequency: 1.376651982378855e-4
allele num: 7264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.521C>T
  hgvsp: ENSP00000417878.1:p.Arg175Trp
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1934C>T
  hgvsp: ENSP00000445239.1:p.Ala645Val
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1316C>T
  hgvsp: ENSP00000410779.1:p.Ala439Val
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-208C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1934C>T
  hgvsp: ENSP00000415026.2:p.Ala645Val
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala645Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

7-127991677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991677
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991677
    reference: chr 7
allele count: 1
allele frequency: 1.356483993488877e-4
allele num: 7372
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1933G>A
  hgvsp: ENSP00000415026.2:p.Ala645Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-209G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.520G>A
  hgvsp: ENST00000480290.1:c.520G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1933G>A
  hgvsp: ENSP00000445239.1:p.Ala645Thr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1315G>A
  hgvsp: ENSP00000410779.1:p.Ala439Thr
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala645Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

7-127991680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991680
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991680
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 7664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.517C>T
  hgvsp: ENST00000480290.1:c.517C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1312C>T
  hgvsp: ENSP00000410779.1:p.His438Tyr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-212C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1930C>T
  hgvsp: ENSP00000445239.1:p.His644Tyr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1930C>T
  hgvsp: ENSP00000415026.2:p.His644Tyr
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His644Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

7-127991731-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991731
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991731
    reference: chr 7
allele count: 11
allele frequency: 1.217622315696259e-3
allele num: 9034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.466C>T
  hgvsp: ENST00000480290.1:c.466C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1879C>T
  hgvsp: ENSP00000415026.2:p.Pro627Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1261C>T
  hgvsp: ENSP00000410779.1:p.Pro421Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1879C>T
  hgvsp: ENSP00000445239.1:p.Pro627Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-263C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2510
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3661
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro627Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

7-127991744-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991744
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991744
    reference: chr 7
allele count: 3
allele frequency: 3.529411764705883e-4
allele num: 8500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1866G>C
  hgvsp: ENST00000535159.1:c.1866G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-276G>C
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1866G>C
  hgvsp: ENST00000446477.2:c.1866G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1248G>C
  hgvsp: ENST00000435512.1:c.1248G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-12G>C
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 1668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 192
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro622Pro
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

7-127991763-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991763
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991763
    reference: chr 7
allele count: 1
allele frequency: 1.528584530724549e-4
allele num: 6542
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1229C>G
  hgvsp: ENSP00000410779.1:p.Ala410Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-31C>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1847C>G
  hgvsp: ENSP00000445239.1:p.Ala616Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1847C>G
  hgvsp: ENSP00000415026.2:p.Ala616Gly
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-295C>G
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 459
  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 293
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 155
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genotype quality: GenotypeQuality
  all individuals: 933
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala616Gly
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

7-127991774-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991774
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991774
    reference: chr 7
allele count: 1
allele frequency: 1.901140684410646e-4
allele num: 5260
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1836G>A
  hgvsp: ENST00000446477.2:c.1836G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1218G>A
  hgvsp: ENST00000435512.1:c.1218G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-42G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1836G>A
  hgvsp: ENST00000535159.1:c.1836G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-306G>A
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 1.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala612Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/7-127991791-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991791
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991791
    reference: chr 7
allele count: 2
allele frequency: 6.414368184733803e-4
allele num: 3118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-59G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-323G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1201G>T
  hgvsp: ENSP00000410779.1:p.Gly401Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1819G>T
  hgvsp: ENSP00000415026.2:p.Gly607Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1819G>T
  hgvsp: ENSP00000445239.1:p.Gly607Cys
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly607Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

7-127991807-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991807
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991807
    reference: chr 7
allele count: 1
allele frequency: 4.730368968779565e-4
allele num: 2114
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1803G>A
  hgvsp: ENST00000446477.2:c.1803G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-339G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-75G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1803G>A
  hgvsp: ENST00000535159.1:c.1803G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1185G>A
  hgvsp: ENST00000435512.1:c.1185G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3530
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln601Gln
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

7-127991873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991873
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991873
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-141G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-405G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1119G>A
  hgvsp: ENST00000435512.1:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1737G>A
  hgvsp: ENST00000535159.1:c.1737G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1737G>A
  hgvsp: ENST00000446477.2:c.1737G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val579Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

7-127991882-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991882
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991882
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1110C>A
  hgvsp: ENST00000435512.1:c.1110C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-414C>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-150C>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1728C>A
  hgvsp: ENST00000535159.1:c.1728C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1728C>A
  hgvsp: ENST00000446477.2:c.1728C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1110C>A
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/7-127991984-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991984
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991984
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 70
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1108-516G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1626G>T
  hgvsp: ENST00000446477.2:c.1626G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1626G>T
  hgvsp: ENST00000535159.1:c.1626G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-252G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-100G>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2941
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro542Pro
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

7-127991989-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127991989
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127991989
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 116
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1621C>T
  hgvsp: ENST00000446477.2:c.1621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-105C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1621C>T
  hgvsp: ENST00000535159.1:c.1621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-257C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+514C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu541Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS

7-127992002-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992002
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992002
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-118G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-270G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1608G>A
  hgvsp: ENST00000535159.1:c.1608G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1608G>A
  hgvsp: ENST00000446477.2:c.1608G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+501G>A
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3617
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys536Lys
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

7-127992012-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992012
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992012
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+491C>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-280C>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1598C>A
  hgvsp: ENSP00000415026.2:p.Ser533Ter
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-128C>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1598C>A
  hgvsp: ENSP00000445239.1:p.Ser533Ter
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: stop gained
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3458
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 1
hgvs: p.Ser533Ter
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS

7-127992034-C-CCCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992034
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992037
    reference: chr 7
allele count: 2
allele frequency: 1.499250374812594e-3
allele num: 1334
alternate allele: CCCG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-153_1108-151dupCGG
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1573_1575dupCGG
  hgvsp: ENSP00000445239.1:p.Arg525dup
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+466_1107+468dupCGG
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-305_465-303dupCGG
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1573_1575dupCGG
  hgvsp: ENSP00000415026.2:p.Arg525dup
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2587
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg525dup
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

7-127992034-CCCG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992034
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992031
    reference: chr 7
allele count: 15
allele frequency: 1.124437781109445e-2
allele num: 1334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+466_1107+468delCGG
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-305_465-303delCGG
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1573_1575delCGG
  hgvsp: ENSP00000445239.1:p.Arg525del
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-153_1108-151delCGG
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1573_1575delCGG
  hgvsp: ENSP00000415026.2:p.Arg525del
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg525del
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: CCCG
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

7-127992042-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992042
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992042
    reference: chr 7
allele count: 3
allele frequency: 1.194267515923567e-3
allele num: 2512
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-310G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-158G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+461G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1568G>A
  hgvsp: ENSP00000415026.2:p.Arg523Gln
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1568G>A
  hgvsp: ENSP00000445239.1:p.Arg523Gln
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg523Gln
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-127992043-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992043
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992043
    reference: chr 7
allele count: 1
allele frequency: 3.987240829346093e-4
allele num: 2508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1567C>A
  hgvsp: ENST00000535159.1:c.1567C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-159C>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1567C>A
  hgvsp: ENST00000446477.2:c.1567C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+460C>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-311C>A
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg523Arg
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

7-127992048-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992048
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992048
    reference: chr 7
allele count: 1
allele frequency: 3.229974160206718e-4
allele num: 3096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-316G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-164G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1562G>A
  hgvsp: ENSP00000445239.1:p.Gly521Glu
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+455G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1562G>A
  hgvsp: ENSP00000415026.2:p.Gly521Glu
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly521Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/7-127992053-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992053
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992053
    reference: chr 7
allele count: 1
allele frequency: 2.979737783075089e-4
allele num: 3356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-321G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1557G>T
  hgvsp: ENSP00000445239.1:p.Trp519Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1557G>T
  hgvsp: ENSP00000415026.2:p.Trp519Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-169G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+450G>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
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genotype quality: GenotypeQuality
  all individuals: 55
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genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3320
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp519Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum

7-127992062-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992062
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992062
    reference: chr 7
allele count: 1
allele frequency: 2.787068004459309e-4
allele num: 3588
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1548C>T
  hgvsp: ENST00000446477.2:c.1548C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-178C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+441C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1548C>T
  hgvsp: ENST00000535159.1:c.1548C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-330C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 11
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 3044
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 94
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genotype quality: GenotypeQuality
  all individuals: 3155
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genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu516Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

7-127992102-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992102
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992102
    reference: chr 7
allele count: 1
allele frequency: 2.949852507374631e-4
allele num: 3390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+401C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1508C>T
  hgvsp: ENSP00000445239.1:p.Ala503Val
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1508C>T
  hgvsp: ENSP00000415026.2:p.Ala503Val
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-218C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-370C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 275
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2851
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala503Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

7-127992122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992122
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992122
    reference: chr 7
allele count: 1
allele frequency: 1.068376068376068e-3
allele num: 936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-238C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1488C>T
  hgvsp: ENST00000535159.1:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-390C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+381C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1488C>T
  hgvsp: ENST00000446477.2:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu496Leu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum

7-127992142-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992142
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992142
    reference: chr 7
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+361C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1468C>T
  hgvsp: ENSP00000415026.2:p.Pro490Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-410C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1468C>T
  hgvsp: ENSP00000445239.1:p.Pro490Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1108-258C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Pro490Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/7-127992239-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992239
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992239
    reference: chr 7
allele count: 3
allele frequency: 1.886792452830189e-3
allele num: 1590
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1371G>T
  hgvsp: ENST00000446477.2:c.1371G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1371G>T
  hgvsp: ENST00000535159.1:c.1371G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsc: ENST00000489517.1:c.1371G>T
  hgvsp: ENST00000489517.1:c.1371G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-507G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+264G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1107+264G>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3147
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 61
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genotype quality: GenotypeQuality
  all individuals: 335
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genotype quality: GenotypeQuality
  all individuals: 144
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 115
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genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg457Arg
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

7-127992239-C-CCGGGCCAGCAGCAGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992239
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992254
    reference: chr 7
allele count: 1
allele frequency: 6.289308176100629e-4
allele num: 1590
alternate allele: CCGGGCCAGCAGCAGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsp: ENSP00000445239.1:p.Leu453_Arg457dup
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsp: ENSP00000419282.1:p.Leu453_Arg457dup
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsp: ENSP00000415026.2:p.Leu453_Arg457dup
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 75
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
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genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 7.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 3147
  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 335
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 115
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genotype quality: GenotypeQuality
  all individuals: 2630
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genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu453_Arg457dup
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

7-127992247-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992247
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992248
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 3508
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1362dupG
  hgvsp: ENSP00000445239.1:p.Leu455AlafsTer124
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsc: ENST00000489517.1:c.1362dupG
  hgvsp: ENSP00000419282.1:p.Leu455AlafsTer?
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1107+255dupG
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+255dupG
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1362dupG
  hgvsp: ENSP00000415026.2:p.Leu455AlafsTer124
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-516dupG
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu455AlafsTer124
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

7-127992268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992268
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992268
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 8180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsc: ENST00000489517.1:c.1342C>T
  hgvsp: ENST00000489517.1:c.1342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1342C>T
  hgvsp: ENST00000535159.1:c.1342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1342C>T
  hgvsp: ENST00000446477.2:c.1342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+235C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-536C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1107+235C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 7.5e0
  variant carriers: 1
hgvs: p.Leu448Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

7-127992282-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992282
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992282
    reference: chr 7
allele count: 1
allele frequency: 9.744689144416293e-5
allele num: 10262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsc: ENST00000489517.1:c.1328G>A
  hgvsp: ENSP00000419282.1:p.Cys443Tyr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1107+221G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+221G>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1328G>A
  hgvsp: ENSP00000445239.1:p.Cys443Tyr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1328G>A
  hgvsp: ENSP00000415026.2:p.Cys443Tyr
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-550G>A
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys443Tyr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

7-127992288-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992288
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992288
    reference: chr 7
allele count: 1
allele frequency: 9.377344336084021e-5
allele num: 10664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+215T>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1322T>A
  hgvsp: ENSP00000445239.1:p.Leu441Gln
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsc: ENST00000489517.1:c.1322T>A
  hgvsp: ENSP00000419282.1:p.Leu441Gln
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-556T>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1107+215T>A
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1322T>A
  hgvsp: ENSP00000415026.2:p.Leu441Gln
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3639
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu441Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/7-127992316-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992316
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992316
    reference: chr 7
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1107+187G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-584G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1294G>T
  hgvsp: ENSP00000445239.1:p.Ala432Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsc: ENST00000489517.1:c.1294G>T
  hgvsp: ENSP00000419282.1:p.Ala432Ser
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+187G>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1294G>T
  hgvsp: ENSP00000415026.2:p.Ala432Ser
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3626
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala432Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

7-127992345-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992345
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992345
    reference: chr 7
allele count: 1
allele frequency: 8.282259400364419e-5
allele num: 12074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-613A>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1265A>G
  hgvsp: ENSP00000445239.1:p.Tyr422Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsc: ENST00000489517.1:c.1265A>G
  hgvsp: ENSP00000419282.1:p.Tyr422Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1107+158A>G
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1265A>G
  hgvsp: ENSP00000415026.2:p.Tyr422Cys
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+158A>G
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4296
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr422Cys
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

7-127992347-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 127992347
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 127992347
    reference: chr 7
allele count: 3
allele frequency: 2.476882430647292e-4
allele num: 12112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000417878
  ensembl transcript: ENST00000480290
  gene symbol: PRRT4
  hgvsc: ENST00000480290.1:c.465-615C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000415026
  ensembl transcript: ENST00000446477
  gene symbol: PRRT4
  hgvsc: ENST00000446477.2:c.1263C>T
  hgvsp: ENST00000446477.2:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000445239
  ensembl transcript: ENST00000535159
  gene symbol: PRRT4
  hgvsc: ENST00000535159.1:c.1263C>T
  hgvsp: ENST00000535159.1:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419282
  ensembl transcript: ENST00000489517
  gene symbol: PRRT4
  hgvsc: ENST00000489517.1:c.1263C>T
  hgvsp: ENST00000489517.1:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000419296
  ensembl transcript: ENST00000489835
  gene symbol: PRRT4
  hgvsc: ENST00000489835.2:c.1107+156C>T
  variant of: http://identifiers.org/hgnc/37280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000224940
  ensembl protein: ENSP00000410779
  ensembl transcript: ENST00000435512
  gene symbol: PRRT4
  hgvsc: ENST00000435512.1:c.1107+156C>T
  variant of: http://identifiers.org/hgnc/37280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Ala421Ala
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.71174255391989e-4
allele num: 5842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.287332646755922e-4
allele num: 7768
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.26e-1

QD
type: SiteQuality
SIO_000300: 1.193e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.876e1

VQSLOD
type: SiteQuality
SIO_000300: -9.657e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.92e-2

DP
type: SiteQuality
SIO_000300: 2.26427e5

GenotypeQuality
all individuals: 300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1290
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0273e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.256e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 2.27725e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.35e-2

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4269
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.19446e5

QD
type: SiteQuality
SIO_000300: 1.504e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.324e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
all individuals: 394
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 543
bin: 9.75e1
variant carriers: 200

GenotypeQuality
all individuals: 195
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3599
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 404
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 895
bin: 6.75e1
variant carriers: 6

South Asian
type: Population
allele count: 11
allele frequency: 1.422291181794673e-3
allele num: 7734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 9.686168151879117e-4
allele num: 5162
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 3.164556962025317e-2
allele num: 158
num of homozygotes: 0

East Asian
type: Population
allele count: 22
allele frequency: 5.612244897959184e-2
allele num: 392
num of homozygotes: 0

African
type: Population
allele count: 192
allele frequency: 2.029598308668076e-1
allele num: 946
num of homozygotes: 15

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 1.736111111111111e-2
allele num: 288
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.88e0

QD
type: SiteQuality
SIO_000300: 1.358e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

DP
type: SiteQuality
SIO_000300: 2.07875e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

GenotypeQuality
all individuals: 3594
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.04604e5

VQSLOD
type: SiteQuality
SIO_000300: -1.333e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.84e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

QD
type: SiteQuality
SIO_000300: 9.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeQuality
all individuals: 307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 9.75e1
variant carriers: 48

GenotypeQuality
all individuals: 1194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 48
allele frequency: 6.214396685655101e-3
allele num: 7724
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 6.329113924050633e-3
allele num: 158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5010
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 3.92e-1

QD
type: SiteQuality
SIO_000300: 1.561e1

DP
type: SiteQuality
SIO_000300: 2.04869e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.03e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
all individuals: 220
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.298701298701299e-4
allele num: 7700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.38e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

FS
type: SiteQuality
SIO_000300: 4.125e0

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

DP
type: SiteQuality
SIO_000300: 2.03487e5

VQSLOD
type: SiteQuality
SIO_000300: -4.712e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e-1

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

GenotypeQuality
all individuals: 553
bin: 2.25e1
variant carriers: 258

GenotypeQuality
all individuals: 446
bin: 1.25e1
variant carriers: 403

GenotypeQuality
all individuals: 80
bin: 8.25e1
variant carriers: 65

GenotypeQuality
all individuals: 5048
bin: 9.75e1
variant carriers: 5043

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 59

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 81

South Asian
type: Population
allele count: 4095
allele frequency: 5.298913043478261e-1
allele num: 7728
num of homozygotes: 1114

Other
type: Population
allele count: 93
allele frequency: 6.038961038961039e-1
allele num: 154
num of homozygotes: 27

Latino
type: Population
allele count: 189
allele frequency: 7.0e-1
allele num: 270
num of homozygotes: 60

African
type: Population
allele count: 215
allele frequency: 3.134110787172011e-1
allele num: 686
num of homozygotes: 27

European (Non-Finnish)
type: Population
allele count: 3245
allele frequency: 6.395348837209303e-1
allele num: 5074
num of homozygotes: 1043

European (Finnish)
type: Population
allele count: 18
allele frequency: 6.923076923076923e-1
allele num: 26
num of homozygotes: 6

East Asian
type: Population
allele count: 152
allele frequency: 3.937823834196891e-1
allele num: 386
num of homozygotes: 35

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.239e-1

QD
type: SiteQuality
SIO_000300: 2.244e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.18e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

DP
type: SiteQuality
SIO_000300: 3.43611e5

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.311647429171039e-4
allele num: 7624
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.61e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.45e-1

DP
type: SiteQuality
SIO_000300: 1.9604e5

QD
type: SiteQuality
SIO_000300: 9.76e0

FS
type: SiteQuality
SIO_000300: 1.951e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.856e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

GenotypeQuality
all individuals: 37
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.288329519450801e-4
allele num: 4370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.901e1

DP
type: SiteQuality
SIO_000300: 1.93421e5

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.27e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 2.285e0

VQSLOD
type: SiteQuality
SIO_000300: -8.998e-1

QD
type: SiteQuality
SIO_000300: 1.058e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

GenotypeQuality
all individuals: 76
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4370
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.315443304393581e-4
allele num: 7602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

FS
type: SiteQuality
SIO_000300: 2.285e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.058e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.27e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.998e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

DP
type: SiteQuality
SIO_000300: 1.93421e5

GenotypeQuality
all individuals: 4189
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.61e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.53e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 1.83545e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.173e0

GenotypeQuality
all individuals: 115
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 2.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.439024390243902e-4
allele num: 4100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.194e0

DP
type: SiteQuality
SIO_000300: 1.82977e5

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

QD
type: SiteQuality
SIO_000300: 4.9e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.46e-2

FS
type: SiteQuality
SIO_000300: 9.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.368e0

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4145
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.299417064122947e-4
allele num: 7548
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.36e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.81432e5

QD
type: SiteQuality
SIO_000300: 1.097e1

FS
type: SiteQuality
SIO_000300: 1.464e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.75e-1

GenotypeQuality
all individuals: 483
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 8.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4036
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.366812227074236e-3
allele num: 458
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 4.069767441860465e-2
allele num: 172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

DP
type: SiteQuality
SIO_000300: 1.80169e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.12e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.45e-1

FS
type: SiteQuality
SIO_000300: 2.494e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.979835500132661e-4
allele num: 7538
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4036
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.494e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.12e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.45e-1

DP
type: SiteQuality
SIO_000300: 1.80169e5

QD
type: SiteQuality
SIO_000300: 1.443e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.49500998003992e-4
allele num: 4008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.976e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

QD
type: SiteQuality
SIO_000300: 1.296e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.35e-2

DP
type: SiteQuality
SIO_000300: 1.79383e5

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

GenotypeQuality
all individuals: 932
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.329080276448698e-4
allele num: 7524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.548e0

QD
type: SiteQuality
SIO_000300: 9.51e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

VQSLOD
type: SiteQuality
SIO_000300: -1.506e0

FS
type: SiteQuality
SIO_000300: 2.353e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.47e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.49e-1

DP
type: SiteQuality
SIO_000300: 1.79458e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.482e0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.523977788995457e-4
allele num: 3962
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.314814814814815e-3
allele num: 432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.35e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

DP
type: SiteQuality
SIO_000300: 1.7679e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.147e0

VQSLOD
type: SiteQuality
SIO_000300: -3.706e-1

FS
type: SiteQuality
SIO_000300: 1.333e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 162
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 43
bin: 8.25e1
variant carriers: 7

Latino
type: Population
allele count: 4
allele frequency: 3.03030303030303e-2
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 134
allele frequency: 3.832951945080092e-2
allele num: 3496
num of homozygotes: 5

South Asian
type: Population
allele count: 302
allele frequency: 4.050429184549356e-2
allele num: 7456
num of homozygotes: 7

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 4.143646408839779e-2
allele num: 362
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 5.434782608695652e-3
allele num: 184
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 5.223880597014925e-2
allele num: 134
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.332e1

VQSLOD
type: SiteQuality
SIO_000300: 5.92e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.63201e5

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.46e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.68e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4193
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GenotypeQuality
all individuals: 160
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.340123291342804e-4
allele num: 7462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.256e0

FS
type: SiteQuality
SIO_000300: 9.204000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQ
type: SiteQuality
SIO_000300: 5.844e1

VQSLOD
type: SiteQuality
SIO_000300: -1.1e0

QD
type: SiteQuality
SIO_000300: 1.04e1

DP
type: SiteQuality
SIO_000300: 1.64723e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.43e-2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 9
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
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Latino
type: Population
allele count: 1
allele frequency: 5.952380952380952e-3
allele num: 168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.118e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.29e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.322e0

QD
type: SiteQuality
SIO_000300: 1.232e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.662e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.72512e5

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 168
bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3784
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.96078431372549e-3
allele num: 510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 1.7305e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.23e-2

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.655e0

MQRankSum
type: SiteQuality
SIO_000300: 2.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.25e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 25
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 9.296148738379814e-4
allele num: 7530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.333e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.76105e5

QD
type: SiteQuality
SIO_000300: 9.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.09e-2

FS
type: SiteQuality
SIO_000300: 1.768e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 36
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 765
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3972
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 550
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South Asian
type: Population
allele count: 1
allele frequency: 1.325908247149297e-4
allele num: 7542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.626e0

FS
type: SiteQuality
SIO_000300: 2.209e0

MQRankSum
type: SiteQuality
SIO_000300: -1.733e0

QD
type: SiteQuality
SIO_000300: 1.318e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.07e-2

MQ
type: SiteQuality
SIO_000300: 5.866e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.898e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.64e-1

DP
type: SiteQuality
SIO_000300: 1.77694e5

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.337255950788981e-4
allele num: 7478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.56e-1

QD
type: SiteQuality
SIO_000300: 1.012e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.023e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.99e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: -4.859e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

DP
type: SiteQuality
SIO_000300: 1.84964e5

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 7.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.84487e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.38e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.22e-1

QD
type: SiteQuality
SIO_000300: 7.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.702e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.24618149146451e-4
allele num: 4452
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7372
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.702e0

DP
type: SiteQuality
SIO_000300: 1.84487e5

QD
type: SiteQuality
SIO_000300: 7.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.38e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.397819401733296e-4
allele num: 7154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4474
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.97e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e-1

DP
type: SiteQuality
SIO_000300: 1.8001e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

QD
type: SiteQuality
SIO_000300: 7.7e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 587
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.063557573256294e-4
allele num: 4846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.13e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.04e-1

DP
type: SiteQuality
SIO_000300: 1.17874e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.195e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.14e-1

GenotypeQuality
all individuals: 536
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.025764895330113e-4
allele num: 2484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.09e0

QD
type: SiteQuality
SIO_000300: 1.938e1

VQSLOD
type: SiteQuality
SIO_000300: -8.488e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.09e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

DP
type: SiteQuality
SIO_000300: 9.563e4

GenotypeQuality
all individuals: 3599
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 7.664793050587634e-4
allele num: 3914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.04e-2

FS
type: SiteQuality
SIO_000300: 4.519e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

DP
type: SiteQuality
SIO_000300: 9.4179e4

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -3.018e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

QD
type: SiteQuality
SIO_000300: 1.057e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.775549188156638e-4
allele num: 2094
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.8536e4

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 1.345e0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.92e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 166
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East Asian
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allele frequency: 0.0e0
allele num: 186
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.8383e4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.03e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
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African
type: Population
allele count: 2
allele frequency: 1.204819277108434e-2
allele num: 166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.6571e4

QD
type: SiteQuality
SIO_000300: 1.04e1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.14e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.318e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
type: Population
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African
type: Population
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allele frequency: 0.0e0
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South Asian
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allele frequency: 3.840245775729647e-4
allele num: 2604
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.9946e4

BaseQRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.81e-2

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2690
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.219512195121951e-2
allele num: 82
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 24
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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FS
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.77e-2

ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

BaseQRankSum
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 100
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 3.52112676056338e-4
allele num: 2840
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 800
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQ
type: SiteQuality
SIO_000300: 5.654e1

MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.61e-2

DP
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VQSLOD
type: SiteQuality
SIO_000300: -3.43e-1

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 138
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 2.304147465437788e-4
allele num: 4340
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1352
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.0475e4

MQRankSum
type: SiteQuality
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QD
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MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -4.69e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

FS
type: SiteQuality
SIO_000300: 1.882e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.3e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 48
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South Asian
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allele count: 1
allele frequency: 2.25123818099955e-4
allele num: 4442
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 140
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East Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

DP
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FS
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SIO_000300: 0.0e0

VQSLOD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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Other
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allele frequency: 0.0e0
allele num: 74
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 154
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 1702
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 120
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South Asian
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allele count: 1
allele frequency: 1.94325689856199e-4
allele num: 5146
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.49e-2

FS
type: SiteQuality
SIO_000300: 4.748e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.425e4

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.67e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 118
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South Asian
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allele frequency: 1.91131498470948e-4
allele num: 5232
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

FS
type: SiteQuality
SIO_000300: 1.0793e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.736e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.54e-2

MQ
type: SiteQuality
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DP
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SIO_000300: 9.5619e4

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1808
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 118
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 154
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5434
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQRankSum
type: SiteQuality
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MQ
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QD
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InbreedingCoeff
type: SiteQuality
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DP
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.726844583987441e-3
allele num: 6370
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 2192
num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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VQSLOD
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DP
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QD
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ClippingRankSum
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FS
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: NaN
allele num: 0
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South Asian
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allele frequency: 4.998333888703765e-4
allele num: 6002
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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South Asian
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Latino
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European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1506
num of homozygotes: 0

ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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MQ
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VQSLOD
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MQRankSum
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FS
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

Latino
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African
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East Asian
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Other
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European (Finnish)
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allele frequency: NaN
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South Asian
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allele frequency: 2.665245202558635e-4
allele num: 3752
num of homozygotes: 0

InbreedingCoeff
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MQ
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DP
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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African
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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VQSLOD
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FS
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MQ
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele num: 0
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Latino
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African
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East Asian
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South Asian
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European (Non-Finnish)
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MQRankSum
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DP
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FS
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BaseQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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QD
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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Other
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FS
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DP
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QD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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European (Non-Finnish)
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East Asian
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European (Finnish)
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num of homozygotes: 0

FS
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MQ
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DP
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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QD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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South Asian
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MQ
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InbreedingCoeff
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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European (Finnish)
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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ClippingRankSum
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BaseQRankSum
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DP
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QD
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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Other
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European (Finnish)
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African
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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QD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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Other
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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QD
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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DP
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QD
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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FS
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MQRankSum
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DP
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: NaN
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Other
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QD
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MQ
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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African
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Other
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European (Finnish)
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Latino
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 2590
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InbreedingCoeff
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MQRankSum
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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Other
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African
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South Asian
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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FS
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MQ
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QD
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: NaN
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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FS
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 0
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European (Non-Finnish)
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allele count: 0
allele frequency: NaN
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East Asian
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allele frequency: NaN
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European (Finnish)
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allele frequency: NaN
allele num: 0
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African
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allele frequency: NaN
allele num: 0
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Other
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allele frequency: NaN
allele num: 0
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South Asian
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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DP
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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allele frequency: NaN
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East Asian
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African
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DP
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FS
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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East Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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InbreedingCoeff
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DP
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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East Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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FS
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QD
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DP
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MQ
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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African
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Other
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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FS
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DP
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.64963503649635e-4
allele num: 2740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 9.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.57e-2

FS
type: SiteQuality
SIO_000300: 3.471e0

VQSLOD
type: SiteQuality
SIO_000300: -1.173e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

DP
type: SiteQuality
SIO_000300: 1.38345e5

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 108
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3470
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.152585119798235e-4
allele num: 3172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.863e1

VQSLOD
type: SiteQuality
SIO_000300: -4.653e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.43e-2

DP
type: SiteQuality
SIO_000300: 1.50616e5

MQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.098e0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3650
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.937984496124031e-3
allele num: 516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.44e0

VQSLOD
type: SiteQuality
SIO_000300: -2.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.43e-2

DP
type: SiteQuality
SIO_000300: 1.59117e5

BaseQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.787e0