10-102732687-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732687
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732687
    reference: chr 10
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.18G>T
  hgvsp: ENSP00000428896.1:p.Trp6Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.18G>T
  hgvsp: ENSP00000430103.1:p.Trp6Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.18G>T
  hgvsp: ENSP00000430175.1:p.Trp6Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.18G>T
  hgvsp: ENSP00000430881.1:p.Trp6Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3026C>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.18G>T
  hgvsp: ENSP00000359270.4:p.Trp6Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.18G>T
  hgvsp: ENSP00000210633.3:p.Trp6Cys
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21097
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Trp6Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

10-102732704-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732704
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732704
    reference: chr 10
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.35T>C
  hgvsp: ENSP00000430175.1:p.Ile12Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.35T>C
  hgvsp: ENSP00000430881.1:p.Ile12Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3043A>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.35T>C
  hgvsp: ENSP00000428896.1:p.Ile12Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.35T>C
  hgvsp: ENSP00000430103.1:p.Ile12Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.35T>C
  hgvsp: ENSP00000359270.4:p.Ile12Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.35T>C
  hgvsp: ENSP00000210633.3:p.Ile12Thr
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21109
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile12Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

10-102732708-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732708
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732708
    reference: chr 10
allele count: 31
allele frequency: 2.554131101077679e-4
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3047G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.39C>T
  hgvsp: ENST00000521006.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.39C>T
  hgvsp: ENST00000210633.3:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.39C>T
  hgvsp: ENST00000519649.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.39C>T
  hgvsp: ENST00000517724.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.39C>T
  hgvsp: ENST00000518124.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.39C>T
  hgvsp: ENST00000370250.4:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7718
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu13Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

10-102732712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732712
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732712
    reference: chr 10
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.43G>A
  hgvsp: ENSP00000430103.1:p.Ala15Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.43G>A
  hgvsp: ENSP00000430175.1:p.Ala15Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.43G>A
  hgvsp: ENSP00000428896.1:p.Ala15Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.43G>A
  hgvsp: ENSP00000430881.1:p.Ala15Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.43G>A
  hgvsp: ENSP00000210633.3:p.Ala15Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.43G>A
  hgvsp: ENSP00000359270.4:p.Ala15Thr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3051C>T
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6013
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala15Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-102732716-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732716
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732716
    reference: chr 10
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.47C>A
  hgvsp: ENSP00000430175.1:p.Thr16Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.47C>A
  hgvsp: ENSP00000359270.4:p.Thr16Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.47C>A
  hgvsp: ENSP00000210633.3:p.Thr16Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.47C>A
  hgvsp: ENSP00000430103.1:p.Thr16Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.47C>A
  hgvsp: ENSP00000430881.1:p.Thr16Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.47C>A
  hgvsp: ENSP00000428896.1:p.Thr16Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3055G>T
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21086
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr16Asn
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/10-102732719-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732719
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732719
    reference: chr 10
allele count: 4
allele frequency: 3.29549012176836e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.50C>A
  hgvsp: ENSP00000430103.1:p.Ala17Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.50C>A
  hgvsp: ENSP00000430175.1:p.Ala17Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.50C>A
  hgvsp: ENSP00000210633.3:p.Ala17Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.50C>A
  hgvsp: ENSP00000430881.1:p.Ala17Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.50C>A
  hgvsp: ENSP00000428896.1:p.Ala17Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3058G>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.50C>A
  hgvsp: ENSP00000359270.4:p.Ala17Glu
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6015
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala17Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

10-102732720-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732720
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732720
    reference: chr 10
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.51A>G
  hgvsp: ENST00000210633.3:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.51A>G
  hgvsp: ENST00000518124.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.51A>G
  hgvsp: ENST00000519649.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3059T>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.51A>G
  hgvsp: ENST00000521006.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.51A>G
  hgvsp: ENST00000370250.4:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.51A>G
  hgvsp: ENST00000517724.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala17Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-102732723-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732723
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732723
    reference: chr 10
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.54C>T
  hgvsp: ENST00000370250.4:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.54C>T
  hgvsp: ENST00000518124.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.54C>T
  hgvsp: ENST00000517724.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.54C>T
  hgvsp: ENST00000521006.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.54C>T
  hgvsp: ENST00000519649.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3062G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.54C>T
  hgvsp: ENST00000210633.3:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6022
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val18Val
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

10-102732731-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732731
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732731
    reference: chr 10
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3070G>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.62C>G
  hgvsp: ENSP00000210633.3:p.Pro21Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.62C>G
  hgvsp: ENSP00000430175.1:p.Pro21Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.62C>G
  hgvsp: ENSP00000430103.1:p.Pro21Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.62C>G
  hgvsp: ENSP00000430881.1:p.Pro21Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.62C>G
  hgvsp: ENSP00000428896.1:p.Pro21Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.62C>G
  hgvsp: ENSP00000359270.4:p.Pro21Arg
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro21Arg
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

10-102732734-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732734
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732734
    reference: chr 10
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.65C>T
  hgvsp: ENSP00000430881.1:p.Ser22Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.65C>T
  hgvsp: ENSP00000359270.4:p.Ser22Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.65C>T
  hgvsp: ENSP00000428896.1:p.Ser22Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.65C>T
  hgvsp: ENSP00000210633.3:p.Ser22Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.65C>T
  hgvsp: ENSP00000430103.1:p.Ser22Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.65C>T
  hgvsp: ENSP00000430175.1:p.Ser22Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3073G>A
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser22Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-102732739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732739
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732739
    reference: chr 10
allele count: 49
allele frequency: 4.036775851842088e-4
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3078G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.70C>T
  hgvsp: ENSP00000430881.1:p.Arg24Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.70C>T
  hgvsp: ENSP00000430103.1:p.Arg24Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.70C>T
  hgvsp: ENSP00000430175.1:p.Arg24Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.70C>T
  hgvsp: ENSP00000210633.3:p.Arg24Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.70C>T
  hgvsp: ENSP00000359270.4:p.Arg24Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.70C>T
  hgvsp: ENSP00000428896.1:p.Arg24Trp
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 9.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21087
  bin: 9.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg24Trp
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-102732739-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732739
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732739
    reference: chr 10
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.70C>A
  hgvsp: ENST00000370250.4:c.70C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.70C>A
  hgvsp: ENST00000521006.1:c.70C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3078G>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.70C>A
  hgvsp: ENST00000210633.3:c.70C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.70C>A
  hgvsp: ENST00000518124.1:c.70C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.70C>A
  hgvsp: ENST00000519649.1:c.70C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.70C>A
  hgvsp: ENST00000517724.1:c.70C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg24Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

10-102732740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732740
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732740
    reference: chr 10
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.71G>A
  hgvsp: ENSP00000428896.1:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.71G>A
  hgvsp: ENSP00000430175.1:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.71G>A
  hgvsp: ENSP00000210633.3:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.71G>A
  hgvsp: ENSP00000430881.1:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.71G>A
  hgvsp: ENSP00000359270.4:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3079C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.71G>A
  hgvsp: ENSP00000430103.1:p.Arg24Gln
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21045
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6020
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg24Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

10-102732746-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732746
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732746
    reference: chr 10
allele count: 8
allele frequency: 6.590545861961017e-5
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.77C>G
  hgvsp: ENSP00000428896.1:p.Pro26Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.77C>G
  hgvsp: ENSP00000210633.3:p.Pro26Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.77C>G
  hgvsp: ENSP00000430103.1:p.Pro26Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.77C>G
  hgvsp: ENSP00000359270.4:p.Pro26Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.77C>G
  hgvsp: ENSP00000430175.1:p.Pro26Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3085G>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.77C>G
  hgvsp: ENSP00000430881.1:p.Pro26Arg
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26199
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro26Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

10-102732746-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732746
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732746
    reference: chr 10
allele count: 12
allele frequency: 9.885818792941526e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.77C>T
  hgvsp: ENSP00000430881.1:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3085G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.77C>T
  hgvsp: ENSP00000428896.1:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.77C>T
  hgvsp: ENSP00000210633.3:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.77C>T
  hgvsp: ENSP00000359270.4:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.77C>T
  hgvsp: ENSP00000430175.1:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.77C>T
  hgvsp: ENSP00000430103.1:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro26Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

10-102732747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732747
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732747
    reference: chr 10
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.78G>A
  hgvsp: ENST00000521006.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.78G>A
  hgvsp: ENST00000370250.4:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.78G>A
  hgvsp: ENST00000519649.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.78G>A
  hgvsp: ENST00000210633.3:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.78G>A
  hgvsp: ENST00000517724.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3086C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.78G>A
  hgvsp: ENST00000518124.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro26Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

10-102732759-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732759
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732759
    reference: chr 10
allele count: 3
allele frequency: 2.471699045924168e-5
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.90A>G
  hgvsp: ENST00000210633.3:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.90A>G
  hgvsp: ENST00000519649.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.90A>G
  hgvsp: ENST00000521006.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.8A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.90A>G
  hgvsp: ENST00000518124.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3098T>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.90A>G
  hgvsp: ENST00000370250.4:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.90A>G
  hgvsp: ENST00000517724.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu30Leu
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ

10-102732760-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732760
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732760
    reference: chr 10
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.91G>T
  hgvsp: ENSP00000430103.1:p.Asp31Tyr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.9G>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.91G>T
  hgvsp: ENSP00000210633.3:p.Asp31Tyr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.91G>T
  hgvsp: ENSP00000428896.1:p.Asp31Tyr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.91G>T
  hgvsp: ENSP00000430881.1:p.Asp31Tyr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.91G>T
  hgvsp: ENSP00000359270.4:p.Asp31Tyr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.91G>T
  hgvsp: ENSP00000430175.1:p.Asp31Tyr
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3099C>A
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9963
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26209
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp31Tyr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

10-102732772-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732772
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732772
    reference: chr 10
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.103C>T
  hgvsp: ENSP00000430881.1:p.Arg35Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.103C>T
  hgvsp: ENSP00000430175.1:p.Arg35Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.103C>T
  hgvsp: ENSP00000359270.4:p.Arg35Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.103C>T
  hgvsp: ENSP00000428896.1:p.Arg35Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.103C>T
  hgvsp: ENSP00000430103.1:p.Arg35Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.21C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.103C>T
  hgvsp: ENSP00000210633.3:p.Arg35Trp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3111G>A
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26156
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5994
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg35Trp
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

10-102732773-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732773
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732773
    reference: chr 10
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.104G>A
  hgvsp: ENSP00000359270.4:p.Arg35Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.104G>A
  hgvsp: ENSP00000430881.1:p.Arg35Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.104G>A
  hgvsp: ENSP00000210633.3:p.Arg35Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.104G>A
  hgvsp: ENSP00000428896.1:p.Arg35Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3112C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.104G>A
  hgvsp: ENSP00000430175.1:p.Arg35Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.104G>A
  hgvsp: ENSP00000430103.1:p.Arg35Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.22G>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21019
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg35Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

10-102732781-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732781
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732781
    reference: chr 10
allele count: 2
allele frequency: 1.64836976230508e-5
allele num: 121332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.112A>G
  hgvsp: ENSP00000359270.4:p.Ile38Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.112A>G
  hgvsp: ENSP00000430175.1:p.Ile38Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.30A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3120T>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.112A>G
  hgvsp: ENSP00000210633.3:p.Ile38Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.112A>G
  hgvsp: ENSP00000428896.1:p.Ile38Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.112A>G
  hgvsp: ENSP00000430103.1:p.Ile38Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.112A>G
  hgvsp: ENSP00000430881.1:p.Ile38Val
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21018
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile38Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

10-102732784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732784
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732784
    reference: chr 10
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.115C>T
  hgvsp: ENSP00000430175.1:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.115C>T
  hgvsp: ENSP00000210633.3:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.115C>T
  hgvsp: ENSP00000428896.1:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.115C>T
  hgvsp: ENSP00000430881.1:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.115C>T
  hgvsp: ENSP00000430103.1:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.33C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.115C>T
  hgvsp: ENSP00000359270.4:p.Pro39Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3123G>A
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro39Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

10-102732788-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732788
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732788
    reference: chr 10
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.119A>G
  hgvsp: ENSP00000359270.4:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.119A>G
  hgvsp: ENSP00000430175.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.119A>G
  hgvsp: ENSP00000430103.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.119A>G
  hgvsp: ENSP00000210633.3:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.37A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.119A>G
  hgvsp: ENSP00000430881.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.119A>G
  hgvsp: ENSP00000428896.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3127T>C
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18590
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26066
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21016
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1894
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr40Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-102732800-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732800
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732800
    reference: chr 10
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.124+7C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.42+7C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.124+7C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.124+7C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.124+7C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3139G>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.124+7C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.124+7C>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25846
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
hgvs: c.124+7C>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

10-102732812-AAAGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732812
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732808
    reference: chr 10
allele count: 2
allele frequency: 1.649348507339601e-5
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.124+20_124+23delAAGG
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.42+20_42+23delAAGG
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.124+20_124+23delAAGG
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.124+20_124+23delAAGG
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.124+20_124+23delAAGG
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.124+20_124+23delAAGG
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.124+20_124+23delAAGG
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3155_398-3152delCCTT
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: AAAGG
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/10-102732813-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732813
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732813
    reference: chr 10
allele count: 32627
allele frequency: 2.693730288469477e-1
allele num: 121122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3152T>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.124+20A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.124+20A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.124+20A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.124+20A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.42+20A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.124+20A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.124+20A>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 8.25e1
  variant carriers: 1111
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 595
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 6.25e1
  variant carriers: 2853
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 7764
  bin: 2.25e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 7.25e1
  variant carriers: 2081
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 5.25e1
  variant carriers: 2574
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 9.75e1
  variant carriers: 3928
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 6.75e1
  variant carriers: 2469
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 4.75e1
  variant carriers: 2204
genotype depth: GenotypeDepth
  all individuals: 7088
  bin: 3.25e1
  variant carriers: 752
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17379
  bin: 2.75e1
  variant carriers: 377
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.75e1
  variant carriers: 810
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 3.75e1
  variant carriers: 1193
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 5.75e1
  variant carriers: 2843
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 1746
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 7.75e1
  variant carriers: 1568
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 23009
  bin: 6.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 7.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5034
  bin: 6.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 5186
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

10-102732826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732826
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732826
    reference: chr 10
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.124+33C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.124+33C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.42+33C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3165G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.124+33C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.124+33C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.124+33C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.124+33C>T
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41618
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-102732832-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732832
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732832
    reference: chr 10
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.124+39C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.124+39C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.124+39C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.124+39C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.124+39C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.124+39C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.42+39C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3171G>T
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

10-102732844-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732844
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732844
    reference: chr 10
allele count: 1
allele frequency: 8.26405302216419e-6
allele num: 121006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.125-42A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.125-42A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.125-42A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.125-42A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.125-42A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3183T>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.125-42A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.43-42A>G
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

10-102732846-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732846
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732846
    reference: chr 10
allele count: 1
allele frequency: 8.265555775970376e-6
allele num: 120984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.125-40G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.125-40G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.125-40G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.125-40G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.125-40G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.125-40G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3185C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.43-40G>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

10-102732849-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732849
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732849
    reference: chr 10
allele count: 2
allele frequency: 1.653247805313538e-5
allele num: 120974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.43-37C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.125-37C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.125-37C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.125-37C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.125-37C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.125-37C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.125-37C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3188G>A
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11691
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9252
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2446
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS

10-102732858-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732858
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732858
    reference: chr 10
allele count: 1
allele frequency: 8.270888127967181e-6
allele num: 120906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.125-28T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.125-28T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.125-28T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.125-28T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.125-28T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3197A>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.43-28T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.125-28T>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

10-102732892-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732892
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732892
    reference: chr 10
allele count: 3
allele frequency: 2.490866821653935e-5
allele num: 120440
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.131C>G
  hgvsp: ENSP00000359270.4:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.131C>G
  hgvsp: ENSP00000210633.3:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.131C>G
  hgvsp: ENSP00000430881.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3231G>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.131C>G
  hgvsp: ENSP00000430175.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.131C>G
  hgvsp: ENSP00000428896.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.131C>G
  hgvsp: ENSP00000430103.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.49C>G
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser44Cys
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

10-102732899-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732899
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732899
    reference: chr 10
allele count: 5
allele frequency: 4.153996975890202e-5
allele num: 120366
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.138C>T
  hgvsp: ENST00000210633.3:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.138C>T
  hgvsp: ENST00000517724.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.138C>T
  hgvsp: ENST00000519649.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.56C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3238G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.138C>T
  hgvsp: ENST00000518124.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.138C>T
  hgvsp: ENST00000521006.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.138C>T
  hgvsp: ENST00000370250.4:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31506
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11226
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8944
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr46Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-102732900-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732900
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732900
    reference: chr 10
allele count: 5
allele frequency: 4.155239757333998e-5
allele num: 120330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.139C>A
  hgvsp: ENST00000517724.1:c.139C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.139C>A
  hgvsp: ENST00000519649.1:c.139C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.139C>A
  hgvsp: ENST00000370250.4:c.139C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.139C>A
  hgvsp: ENST00000521006.1:c.139C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.139C>A
  hgvsp: ENST00000210633.3:c.139C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3239G>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.139C>A
  hgvsp: ENST00000518124.1:c.139C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.57C>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13283
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42043
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg47Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

10-102732903-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732903
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732903
    reference: chr 10
allele count: 1
allele frequency: 8.311446524153063e-6
allele num: 120316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.142C>G
  hgvsp: ENSP00000428896.1:p.His48Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.142C>G
  hgvsp: ENSP00000430175.1:p.His48Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.142C>G
  hgvsp: ENSP00000430881.1:p.His48Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.142C>G
  hgvsp: ENSP00000359270.4:p.His48Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.142C>G
  hgvsp: ENSP00000430103.1:p.His48Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.142C>G
  hgvsp: ENSP00000210633.3:p.His48Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.60C>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3242G>C
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His48Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

10-102732912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732912
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732912
    reference: chr 10
allele count: 1
allele frequency: 8.315731701232391e-6
allele num: 120254
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.151G>A
  hgvsp: ENSP00000210633.3:p.Gly51Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.151G>A
  hgvsp: ENSP00000430175.1:p.Gly51Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.151G>A
  hgvsp: ENSP00000430881.1:p.Gly51Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3251C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.151G>A
  hgvsp: ENSP00000428896.1:p.Gly51Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.151G>A
  hgvsp: ENSP00000430103.1:p.Gly51Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.151G>A
  hgvsp: ENSP00000359270.4:p.Gly51Ser
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.69G>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42440
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly51Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

10-102732919-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732919
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732919
    reference: chr 10
allele count: 1
allele frequency: 8.32209850035785e-6
allele num: 120162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3258G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.158C>T
  hgvsp: ENSP00000210633.3:p.Ala53Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.158C>T
  hgvsp: ENSP00000359270.4:p.Ala53Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.158C>T
  hgvsp: ENSP00000428896.1:p.Ala53Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.158C>T
  hgvsp: ENSP00000430175.1:p.Ala53Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.76C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.158C>T
  hgvsp: ENSP00000430103.1:p.Ala53Val
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.158C>T
  hgvsp: ENSP00000430881.1:p.Ala53Val
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8885
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala53Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

10-102732936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732936
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732936
    reference: chr 10
allele count: 1
allele frequency: 8.333055564814507e-6
allele num: 120004
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.175C>T
  hgvsp: ENST00000521006.1:c.175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.93C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.175C>T
  hgvsp: ENST00000210633.3:c.175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.175C>T
  hgvsp: ENST00000370250.4:c.175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3275G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.175C>T
  hgvsp: ENST00000517724.1:c.175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.175C>T
  hgvsp: ENST00000519649.1:c.175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.175C>T
  hgvsp: ENST00000518124.1:c.175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8861
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu59Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

10-102732939-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732939
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732939
    reference: chr 10
allele count: 4
allele frequency: 3.334333633423361e-5
allele num: 119964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.178C>T
  hgvsp: ENST00000519649.1:c.178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.96C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.178C>T
  hgvsp: ENST00000518124.1:c.178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.178C>T
  hgvsp: ENST00000517724.1:c.178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3278G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.178C>T
  hgvsp: ENST00000370250.4:c.178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.178C>T
  hgvsp: ENST00000210633.3:c.178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.178C>T
  hgvsp: ENST00000521006.1:c.178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu60Leu
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

10-102732950-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732950
    reference: chr 10
allele count: 1
allele frequency: 8.344041519950603e-6
allele num: 119846
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.189G>A
  hgvsp: ENST00000521006.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.189G>A
  hgvsp: ENST00000210633.3:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.189G>A
  hgvsp: ENST00000518124.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.189G>A
  hgvsp: ENST00000370250.4:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.189G>A
  hgvsp: ENST00000517724.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3289C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.107G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.189G>A
  hgvsp: ENST00000519649.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8810
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu63Glu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum

10-102732950-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732950
    reference: chr 10
allele count: 1
allele frequency: 8.344041519950603e-6
allele num: 119846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.189G>T
  hgvsp: ENSP00000430103.1:p.Glu63Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.189G>T
  hgvsp: ENSP00000430175.1:p.Glu63Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.189G>T
  hgvsp: ENSP00000210633.3:p.Glu63Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.107G>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.189G>T
  hgvsp: ENSP00000359270.4:p.Glu63Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.189G>T
  hgvsp: ENSP00000428896.1:p.Glu63Asp
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3289C>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.189G>T
  hgvsp: ENSP00000430881.1:p.Glu63Asp
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu63Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

10-102732955-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732955
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732955
    reference: chr 10
allele count: 1
allele frequency: 8.347384764353328e-6
allele num: 119798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.194C>T
  hgvsp: ENSP00000359270.4:p.Ser65Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.194C>T
  hgvsp: ENSP00000428896.1:p.Ser65Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.194C>T
  hgvsp: ENSP00000430103.1:p.Ser65Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.194C>T
  hgvsp: ENSP00000430175.1:p.Ser65Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.194C>T
  hgvsp: ENSP00000210633.3:p.Ser65Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.194C>T
  hgvsp: ENSP00000430881.1:p.Ser65Leu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3294G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.112C>T
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8785
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser65Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

10-102732973-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732973
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732973
    reference: chr 10
allele count: 2
allele frequency: 1.674228599172931e-5
allele num: 119458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.212G>A
  hgvsp: ENSP00000430881.1:p.Gly71Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.130G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.212G>A
  hgvsp: ENSP00000428896.1:p.Gly71Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.212G>A
  hgvsp: ENSP00000359270.4:p.Gly71Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.212G>A
  hgvsp: ENSP00000430103.1:p.Gly71Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.212G>A
  hgvsp: ENSP00000430175.1:p.Gly71Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.212G>A
  hgvsp: ENSP00000210633.3:p.Gly71Glu
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3312C>T
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly71Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

10-102732979-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102732979
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102732979
    reference: chr 10
allele count: 7
allele frequency: 5.867954263487912e-5
allele num: 119292
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.218G>A
  hgvsp: ENSP00000210633.3:p.Arg73Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3318C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.218G>A
  hgvsp: ENSP00000430103.1:p.Arg73Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.218G>A
  hgvsp: ENSP00000359270.4:p.Arg73Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.218G>A
  hgvsp: ENSP00000430881.1:p.Arg73Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.218G>A
  hgvsp: ENSP00000430175.1:p.Arg73Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.218G>A
  hgvsp: ENSP00000428896.1:p.Arg73Gln
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.136G>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg73Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-102733000-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733000
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733000
    reference: chr 10
allele count: 1
allele frequency: 8.406469619018796e-6
allele num: 118956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.239G>T
  hgvsp: ENSP00000430103.1:p.Ser80Ile
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.239G>T
  hgvsp: ENSP00000210633.3:p.Ser80Ile
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.239G>T
  hgvsp: ENSP00000428896.1:p.Ser80Ile
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.239G>T
  hgvsp: ENSP00000430881.1:p.Ser80Ile
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3339C>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.239G>T
  hgvsp: ENSP00000430175.1:p.Ser80Ile
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.239G>T
  hgvsp: ENSP00000359270.4:p.Ser80Ile
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.157G>T
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser80Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

10-102733007-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733007
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733007
    reference: chr 10
allele count: 6
allele frequency: 5.051865822443756e-5
allele num: 118768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.246C>T
  hgvsp: ENST00000370250.4:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.246C>T
  hgvsp: ENST00000519649.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.246C>T
  hgvsp: ENST00000210633.3:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3346G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.246C>T
  hgvsp: ENST00000517724.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.164C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.246C>T
  hgvsp: ENST00000521006.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.246C>T
  hgvsp: ENST00000518124.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10779
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42016
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn82Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD

10-102733008-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733008
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733008
    reference: chr 10
allele count: 51
allele frequency: 4.296545914069082e-4
allele num: 118700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.247G>A
  hgvsp: ENSP00000428896.1:p.Asp83Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.247G>A
  hgvsp: ENSP00000210633.3:p.Asp83Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3347C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.247G>A
  hgvsp: ENSP00000430881.1:p.Asp83Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.165G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.247G>A
  hgvsp: ENSP00000430175.1:p.Asp83Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.247G>A
  hgvsp: ENSP00000359270.4:p.Asp83Asn
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.247G>A
  hgvsp: ENSP00000430103.1:p.Asp83Asn
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31041
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10753
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp83Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ

10-102733021-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733021
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733021
    reference: chr 10
allele count: 1
allele frequency: 8.45522955948254e-6
allele num: 118270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3360C>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.260G>C
  hgvsp: ENSP00000430175.1:p.Gly87Ala
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.260G>C
  hgvsp: ENSP00000359270.4:p.Gly87Ala
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.260G>C
  hgvsp: ENSP00000210633.3:p.Gly87Ala
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.260G>C
  hgvsp: ENSP00000430103.1:p.Gly87Ala
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.260G>C
  hgvsp: ENSP00000428896.1:p.Gly87Ala
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.260G>C
  hgvsp: ENSP00000430881.1:p.Gly87Ala
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.178G>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly87Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

10-102733027-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733027
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733027
    reference: chr 10
allele count: 2
allele frequency: 1.69643917417341e-5
allele num: 117894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.266A>G
  hgvsp: ENSP00000430103.1:p.His89Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.266A>G
  hgvsp: ENSP00000430175.1:p.His89Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.266A>G
  hgvsp: ENSP00000359270.4:p.His89Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.266A>G
  hgvsp: ENSP00000210633.3:p.His89Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3366T>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.184A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.266A>G
  hgvsp: ENSP00000430881.1:p.His89Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.266A>G
  hgvsp: ENSP00000428896.1:p.His89Arg
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2008
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His89Arg
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

10-102733030-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733030
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733030
    reference: chr 10
allele count: 1
allele frequency: 8.497620666213461e-6
allele num: 117680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3369T>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.269A>G
  hgvsp: ENSP00000210633.3:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.187A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.269A>G
  hgvsp: ENSP00000430175.1:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.269A>G
  hgvsp: ENSP00000359270.4:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.269A>G
  hgvsp: ENSP00000428896.1:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.269A>G
  hgvsp: ENSP00000430881.1:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.269A>G
  hgvsp: ENSP00000430103.1:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12906
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys90Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

10-102733032-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733032
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733032
    reference: chr 10
allele count: 1
allele frequency: 8.502967535669949e-6
allele num: 117606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3371C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.189G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.271G>A
  hgvsp: ENSP00000359270.4:p.Glu91Lys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.271G>A
  hgvsp: ENSP00000428896.1:p.Glu91Lys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.271G>A
  hgvsp: ENSP00000430175.1:p.Glu91Lys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.271G>A
  hgvsp: ENSP00000430103.1:p.Glu91Lys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.271G>A
  hgvsp: ENSP00000430881.1:p.Glu91Lys
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.271G>A
  hgvsp: ENSP00000210633.3:p.Glu91Lys
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12855
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu91Lys
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

10-102733051-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733051
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733051
    reference: chr 10
allele count: 2
allele frequency: 1.732021615629763e-5
allele num: 115472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+17T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+17T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+17T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+17T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+17T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+17T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3390A>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+17T>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5909
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

http://identifiers.org/exac.variant/10-102733059-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733059
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733059
    reference: chr 10
allele count: 1
allele frequency: 8.722654478210808e-6
allele num: 114644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+25C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3398G>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+25C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+25C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+25C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+25C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+25C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+25C>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-102733060-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733060
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733060
    reference: chr 10
allele count: 8
allele frequency: 6.993373778345019e-5
allele num: 114394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+26C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+26C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+26C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+26C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+26C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+26C>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3399G>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+26C>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10529
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21017
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8262
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

10-102733060-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733060
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733060
    reference: chr 10
allele count: 1
allele frequency: 8.741717222931273e-6
allele num: 114394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+26C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+26C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+26C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+26C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3399G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+26C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+26C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+26C>T
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28274
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5606
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-102733061-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733061
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733061
    reference: chr 10
allele count: 4
allele frequency: 3.493693882542011e-5
allele num: 114492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+27A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+27A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+27A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+27A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+27A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+27A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+27A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3400T>G
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21003
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5603
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29039
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

10-102733062-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733062
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733062
    reference: chr 10
allele count: 2
allele frequency: 1.748374012168683e-5
allele num: 114392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+28G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+28G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+28G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+28G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3401C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+28G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+28G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+28G>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20301
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27903
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5505
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-102733064-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733064
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733064
    reference: chr 10
allele count: 8
allele frequency: 7.014836378941461e-5
allele num: 114044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3403C>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+30G>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9345
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6364
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18295
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12615
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8362
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5517
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

10-102733066-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733066
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733066
    reference: chr 10
allele count: 2
allele frequency: 1.754816972589759e-5
allele num: 113972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3405C>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+32G>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+32G>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+32G>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+32G>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+32G>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+32G>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+32G>T
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12862
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9023
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3753
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5762
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4998
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

10-102733071-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733071
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733071
    reference: chr 10
allele count: 1
allele frequency: 8.833298000141333e-6
allele num: 113208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+37T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+37T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+37T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+37T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+37T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+37T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+37T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3410A>G
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13244
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5469
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1929
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9438
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-102733072-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733072
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733072
    reference: chr 10
allele count: 1
allele frequency: 8.861791499769594e-6
allele num: 112844
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+38A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+38A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+38A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+38A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3411T>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+38A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+38A>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+38A>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4427
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2433
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7494
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

10-102733073-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733073
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733073
    reference: chr 10
allele count: 1
allele frequency: 8.865248226950355e-6
allele num: 112800
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+39T>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+39T>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+39T>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+39T>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+39T>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+39T>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+39T>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3412A>T
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15614
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7483
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

10-102733079-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733079
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733079
    reference: chr 10
allele count: 2
allele frequency: 1.804760959410926e-5
allele num: 110818
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+45T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+45T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+45T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+45T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+45T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3418A>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+45T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+45T>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12902
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11618
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7743
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

10-102733084-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733084
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733084
    reference: chr 10
allele count: 4
allele frequency: 3.683648285261724e-5
allele num: 108588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.273+50C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.191+50C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.273+50C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.273+50C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.273+50C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.273+50C>T
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3423G>A
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.273+50C>T
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12740
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13603
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17033
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6202
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4567
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7482
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7871
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

10-102733257-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733257
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733257
    reference: chr 10
allele count: 11
allele frequency: 9.13363335935035e-5
allele num: 120434
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.274-47T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.274-47T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.274-47T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3596A>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.274-47T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.274-47T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.274-47T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.192-47T>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8558
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15620
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21040
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4193
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

10-102733263-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733263
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733263
    reference: chr 10
allele count: 14
allele frequency: 1.161671479305652e-4
allele num: 120516
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.274-41T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.274-41T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.192-41T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.274-41T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.274-41T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.274-41T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.274-41T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3602A>G
  variant of: http://identifiers.org/hgnc/14517
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21457
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17267
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8598
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34368
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

10-102733267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733267
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733267
    reference: chr 10
allele count: 1
allele frequency: 8.296138976920141e-6
allele num: 120538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.274-37G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.274-37G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.274-37G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3606C>T
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.274-37G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.274-37G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.274-37G>A
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.192-37G>A
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

10-102733274-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733274
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733274
    reference: chr 10
allele count: 1
allele frequency: 8.289949265510494e-6
allele num: 120628
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.274-30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.192-30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.274-30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.274-30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.274-30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.274-30G>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3613C>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.274-30G>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22487
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38154
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

10-102733277-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733277
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733277
    reference: chr 10
allele count: 2
allele frequency: 1.657412778652524e-5
allele num: 120670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.274-27T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3616A>G
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.274-27T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.274-27T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.274-27T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.274-27T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.274-27T>C
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.192-27T>C
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38626
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS

10-102733284-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102733284
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 102733284
    reference: chr 10
allele count: 2
allele frequency: 1.655519502019734e-5
allele num: 120808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430175
  ensembl transcript: ENST00000517724
  gene symbol: SEMA4G
  hgvsc: ENST00000517724.1:c.274-20A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000055950
  ensembl protein: ENSP00000430369
  ensembl transcript: ENST00000523148
  gene symbol: MRPL43
  hgvsc: ENST00000523148.1:c.398-3623T>C
  variant of: http://identifiers.org/hgnc/14517
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000210633
  ensembl transcript: ENST00000210633
  gene symbol: SEMA4G
  hgvsc: ENST00000210633.3:c.274-20A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000428896
  ensembl transcript: ENST00000519649
  gene symbol: SEMA4G
  hgvsc: ENST00000519649.1:c.274-20A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430881
  ensembl transcript: ENST00000521006
  gene symbol: SEMA4G
  hgvsc: ENST00000521006.1:c.274-20A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000359270
  ensembl transcript: ENST00000370250
  gene symbol: SEMA4G
  hgvsc: ENST00000370250.4:c.274-20A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl protein: ENSP00000430103
  ensembl transcript: ENST00000518124
  gene symbol: SEMA4G
  hgvsc: ENST00000518124.1:c.274-20A>G
  variant of: http://identifiers.org/hgnc/10735
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000095539
  ensembl transcript: ENST00000519756
  gene symbol: SEMA4G
  hgvsc: ENST00000519756.1:n.192-20A>G
  variant of: http://identifiers.org/hgnc/10735
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8271
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39938
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 1876
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5991
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.23e-1

FS
type: SiteQuality
SIO_000300: 1.982e0

DP
type: SiteQuality
SIO_000300: 2.451576e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 2.541e1

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.989e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26126
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1891
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
type: SiteQuality
SIO_000300: -1.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.453998e6

FS
type: SiteQuality
SIO_000300: 1.809e0

QD
type: SiteQuality
SIO_000300: 1.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.129e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: 4.92e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1893
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21111
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 1501
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.047611908973706e-4
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

FS
type: SiteQuality
SIO_000300: 5.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.344e0

DP
type: SiteQuality
SIO_000300: 2.455704e6

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

QD
type: SiteQuality
SIO_000300: 1.142e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26148
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21087
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1898
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.168e0

FS
type: SiteQuality
SIO_000300: 2.806e0

MQRankSum
type: SiteQuality
SIO_000300: -5.99e-1

DP
type: SiteQuality
SIO_000300: 2.45271e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.607e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1898
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6019
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.57e-1

DP
type: SiteQuality
SIO_000300: 2.452782e6

FS
type: SiteQuality
SIO_000300: 4.119e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.421e0

QD
type: SiteQuality
SIO_000300: 1.207e1

VQSLOD
type: SiteQuality
SIO_000300: 9.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 26142
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1898
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21088
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.749e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

DP
type: SiteQuality
SIO_000300: 2.452914e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

QD
type: SiteQuality
SIO_000300: 1.37e1

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.67e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.22e1

DP
type: SiteQuality
SIO_000300: 2.452807e6

FS
type: SiteQuality
SIO_000300: 1.703e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.12e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.161e1

DP
type: SiteQuality
SIO_000300: 2.452875e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.932e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.62e-1

FS
type: SiteQuality
SIO_000300: 9.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997871511227029e-5
allele num: 66714
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
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allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.988e1

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

FS
type: SiteQuality
SIO_000300: 4.142e0

QD
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.088e0

DP
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InbreedingCoeff
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SIO_000300: -1.0e-4

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997871511227029e-5
allele num: 66714
num of homozygotes: 0

South Asian
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African
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ClippingRankSum
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MQ
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MQRankSum
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FS
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QD
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -1.03e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 1.103752759381898e-3
allele num: 906
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European (Non-Finnish)
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allele frequency: 6.595317324699463e-4
allele num: 66714
num of homozygotes: 0

East Asian
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South Asian
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allele num: 16512
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European (Finnish)
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allele num: 6614
num of homozygotes: 0

African
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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FS
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -3.43e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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ClippingRankSum
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SIO_000300: -3.43e-1

BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 4
allele frequency: 5.99538355466291e-5
allele num: 66718
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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Other
type: Population
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ClippingRankSum
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SIO_000300: 4.93e-1

ReadPosRankSum
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SIO_000300: -1.77e-1

QD
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 7.92e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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South Asian
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East Asian
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European (Finnish)
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DP
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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African
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
type: Population
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8654
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Latino
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South Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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allele num: 66718
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FS
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele num: 66710
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African
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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FS
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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Other
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African
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Latino
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allele frequency: 1.727712508638562e-4
allele num: 11576
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 50
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

FS
type: SiteQuality
SIO_000300: 4.497e0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-2

QD
type: SiteQuality
SIO_000300: 1.005e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

DP
type: SiteQuality
SIO_000300: 2.447357e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.451e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.36e-1

DP
type: SiteQuality
SIO_000300: 2.447192e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.426e1

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.446261e6

QD
type: SiteQuality
SIO_000300: 7.66e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.437e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 3.219e0

QD
type: SiteQuality
SIO_000300: 1.252e1

MQRankSum
type: SiteQuality
SIO_000300: 5.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.818e0

DP
type: SiteQuality
SIO_000300: 2.445972e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 5979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 1075
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 749
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.83e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.93e-2

DP
type: SiteQuality
SIO_000300: 2.445209e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

QD
type: SiteQuality
SIO_000300: 1.699e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21014
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1884
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5956
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: 9.0e-1

QD
type: SiteQuality
SIO_000300: 1.097e1

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

FS
type: SiteQuality
SIO_000300: 2.65e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.442809e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.045e0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 1065
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GenotypeQuality
all individuals: 101
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GenotypeQuality
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GenotypeQuality
all individuals: 21007
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GenotypeQuality
all individuals: 5907
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25728
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001290554938624e-5
allele num: 66638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.359e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.432e0

DP
type: SiteQuality
SIO_000300: 2.44076e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 7

GenotypeQuality
all individuals: 288
bin: 8.75e1
variant carriers: 46

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 13

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 5

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 328
bin: 9.25e1
variant carriers: 65

GenotypeQuality
all individuals: 27648
bin: 9.75e1
variant carriers: 27141

GenotypeQuality
all individuals: 1387
bin: 7.75e1
variant carriers: 35

GenotypeQuality
all individuals: 715
bin: 8.25e1
variant carriers: 42

European (Finnish)
type: Population
allele count: 1180
allele frequency: 1.787878787878788e-1
allele num: 6600
num of homozygotes: 104

East Asian
type: Population
allele count: 4790
allele frequency: 5.563298490127758e-1
allele num: 8610
num of homozygotes: 1337

Other
type: Population
allele count: 224
allele frequency: 2.47787610619469e-1
allele num: 904
num of homozygotes: 26

European (Non-Finnish)
type: Population
allele count: 13272
allele frequency: 1.992792792792793e-1
allele num: 66600
num of homozygotes: 1330

Latino
type: Population
allele count: 4313
allele frequency: 3.73873092926491e-1
allele num: 11536
num of homozygotes: 854

African
type: Population
allele count: 3870
allele frequency: 3.732638888888889e-1
allele num: 10368
num of homozygotes: 711

South Asian
type: Population
allele count: 4978
allele frequency: 3.01623848763936e-1
allele num: 16504
num of homozygotes: 824

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

DP
type: SiteQuality
SIO_000300: 2.865546e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.72e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

QD
type: SiteQuality
SIO_000300: 1.886e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

GenotypeQuality
all individuals: 1011
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
all individuals: 9453
bin: 6.75e1
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GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 119
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 277
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GenotypeQuality
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 522
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GenotypeQuality
all individuals: 1332
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 1.199e0

DP
type: SiteQuality
SIO_000300: 1.673458e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

QD
type: SiteQuality
SIO_000300: 1.286e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.209e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9411
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.671014e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.383e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 5.013e0

VQSLOD
type: SiteQuality
SIO_000300: 8.699999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.331e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.369e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 9308
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 7.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.255e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

DP
type: SiteQuality
SIO_000300: 1.664367e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.641e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66462
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.83e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.165e1

VQSLOD
type: SiteQuality
SIO_000300: -2.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.148e0

FS
type: SiteQuality
SIO_000300: 1.238e1

DP
type: SiteQuality
SIO_000300: 1.663726e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
all individuals: 179
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variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.939487975174554e-4
allele num: 10312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.335e1

DP
type: SiteQuality
SIO_000300: 1.662427e6

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.964e0

FS
type: SiteQuality
SIO_000300: 4.114e0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2412
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 485
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GenotypeQuality
all individuals: 436
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.703085581214826e-5
allele num: 10306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 3.586e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
SIO_000300: 4.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

QD
type: SiteQuality
SIO_000300: 1.487e1

DP
type: SiteQuality
SIO_000300: 1.658256e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.318e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 117
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GenotypeQuality
all individuals: 42067
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.533502584096473e-5
allele num: 66174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.296e0

QD
type: SiteQuality
SIO_000300: 1.462e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 2.046e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.648199e6

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 741
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 910
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.916420845624386e-4
allele num: 10170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66130
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.328e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.75e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.646817e6

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.113e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 205
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GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.563609959761595e-5
allele num: 66106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.141e1

DP
type: SiteQuality
SIO_000300: 1.647056e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

FS
type: SiteQuality
SIO_000300: 1.105e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 151
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513042425709617e-5
allele num: 66092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

DP
type: SiteQuality
SIO_000300: 1.64591e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.397e0

MQ
type: SiteQuality
SIO_000300: 5.76e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 896
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513867021920794e-5
allele num: 66056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.26e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

DP
type: SiteQuality
SIO_000300: 1.645674e6

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514830187535977e-5
allele num: 66014
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.798e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.462e1

FS
type: SiteQuality
SIO_000300: 8.430999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.865e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 1.644747e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.31e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 101
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516714190377965e-5
allele num: 65932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

DP
type: SiteQuality
SIO_000300: 1.643618e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.534e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.147e1

MQ
type: SiteQuality
SIO_000300: 6.012e1

FS
type: SiteQuality
SIO_000300: 8.581e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.216e0

GenotypeQuality
all individuals: 145
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1150
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.068513517613861e-5
allele num: 65914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.756e0

MQRankSum
type: SiteQuality
SIO_000300: -1.216e0

VQSLOD
type: SiteQuality
SIO_000300: -1.613e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

DP
type: SiteQuality
SIO_000300: 1.643318e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.202e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

QD
type: SiteQuality
SIO_000300: 9.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.081245439065921e-5
allele num: 16444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.99e-2

FS
type: SiteQuality
SIO_000300: 1.987e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.89e-1

DP
type: SiteQuality
SIO_000300: 1.641615e6

MQ
type: SiteQuality
SIO_000300: 5.937e1

QD
type: SiteQuality
SIO_000300: 1.052e1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65844
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.081245439065921e-5
allele num: 16444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.73e-1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519295047098146e-5
allele num: 65820
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.24e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.047108294228777e-5
allele num: 65636
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.256e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 392
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GenotypeQuality
all individuals: 2214
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.051850947599719e-5
allele num: 65534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.858917272088118e-4
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.466e0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 1.18e1

MQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.031e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.63315e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

GenotypeQuality
all individuals: 229
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8580
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530081400330498e-5
allele num: 65356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.218e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.064e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.759e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e0

FS
type: SiteQuality
SIO_000300: 2.962e0

DP
type: SiteQuality
SIO_000300: 1.625416e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

GenotypeQuality
all individuals: 2182
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8516
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
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GenotypeQuality
all individuals: 379
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 180
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.76731544800982e-5
allele num: 11406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110228522546743e-5
allele num: 16366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.010917913465427e-4
allele num: 9892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.597278411180581e-5
allele num: 65256
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.620217e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.53e-1

QD
type: SiteQuality
SIO_000300: 1.192e1

FS
type: SiteQuality
SIO_000300: 4.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 9.75e1
variant carriers: 51

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41815
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2171
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
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variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

East Asian
type: Population
allele count: 43
allele frequency: 5.058823529411765e-3
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.067108330266225e-5
allele num: 65208
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.06550748079256e-4
allele num: 9892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

FS
type: SiteQuality
SIO_000300: 1.188e0

QD
type: SiteQuality
SIO_000300: 1.165e1

DP
type: SiteQuality
SIO_000300: 1.618873e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 438
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8369
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
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variant carriers: 0

GenotypeQuality
all individuals: 1068
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variant carriers: 0

GenotypeQuality
all individuals: 366
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variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
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variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9842
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.128953174797744e-5
allele num: 16316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e-1

FS
type: SiteQuality
SIO_000300: 1.616e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.604333e6

QD
type: SiteQuality
SIO_000300: 6.37e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.922e0

MQ
type: SiteQuality
SIO_000300: 5.795e1

GenotypeQuality
all individuals: 272
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
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variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
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GenotypeQuality
all individuals: 8248
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variant carriers: 0

GenotypeQuality
all individuals: 321
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GenotypeQuality
all individuals: 529
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variant carriers: 0

GenotypeQuality
all individuals: 40922
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
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GenotypeQuality
all individuals: 817
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 543
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.041232904674423e-4
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 1.592063e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 4.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.198e1

GenotypeQuality
all individuals: 620
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40506
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 130
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64668
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.18427285646613e-4
allele num: 8444
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.298e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.078e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 1.584271e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.01e-1

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
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GenotypeQuality
all individuals: 8161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 5.25e1
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GenotypeQuality
all individuals: 40334
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
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variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2663
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546742560168286e-5
allele num: 64652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.115e1

FS
type: SiteQuality
SIO_000300: 2.864e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.684e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 1.58004e6

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
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variant carriers: 2

GenotypeQuality
all individuals: 1872
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
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GenotypeQuality
all individuals: 1605
bin: 7.25e1
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GenotypeQuality
all individuals: 6593
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.217358865953743e-5
allele num: 16084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11080
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575944778894947e-5
allele num: 63454
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.99e-1

QD
type: SiteQuality
SIO_000300: 1.082e1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 1.471096e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.266e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

FS
type: SiteQuality
SIO_000300: 1.544e0

GenotypeQuality
all individuals: 2848
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 550
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63006
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.110787172011662e-5
allele num: 10976
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16030
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.284e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.974e1

DP
type: SiteQuality
SIO_000300: 1.384556e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.152e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.532e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.112e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590684948939013e-5
allele num: 62866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.119095385737735e-5
allele num: 10966
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.368074718743367e-4
allele num: 9422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8134
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.364452e6

FS
type: SiteQuality
SIO_000300: 1.979e0

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.767e0

MQRankSum
type: SiteQuality
SIO_000300: -1.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 1.446e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 737
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GenotypeQuality
all individuals: 632
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10966
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590684948939013e-5
allele num: 62866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.446e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.767e0

MQRankSum
type: SiteQuality
SIO_000300: -1.99e-1

FS
type: SiteQuality
SIO_000300: 1.979e0

DP
type: SiteQuality
SIO_000300: 1.364452e6

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62900
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.646308113035552e-4
allele num: 10970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.359e0

VQSLOD
type: SiteQuality
SIO_000300: 2.94e-1

DP
type: SiteQuality
SIO_000300: 1.362695e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

FS
type: SiteQuality
SIO_000300: 5.719e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.054e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 750
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variant carriers: 2

GenotypeQuality
all individuals: 648
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variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.181572333046992e-5
allele num: 62862
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.067e1

MQRankSum
type: SiteQuality
SIO_000300: 7.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.348911e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.609e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 248
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3651
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15998
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.831501831501832e-4
allele num: 10920
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.575792396820837e-5
allele num: 62658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8096
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.101e0

DP
type: SiteQuality
SIO_000300: 1.31047e6

QD
type: SiteQuality
SIO_000300: 1.223e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 6.641e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.234263144902493e-4
allele num: 8102
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.251562890722681e-5
allele num: 15996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62626
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 6.024e0

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 1.298291e6

QD
type: SiteQuality
SIO_000300: 1.176e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6060
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.607406931138687e-5
allele num: 62212
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.24177e6

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.72e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6020
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.251877816725087e-4
allele num: 7988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62044
num of homozygotes: 0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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FS
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ClippingRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17210
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10780
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.29643621710112e-5
allele num: 15882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6016
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.213665e6

QD
type: SiteQuality
SIO_000300: 2.053e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.361e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

GenotypeQuality
all individuals: 263
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5042
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3742
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.473285335354301e-5
allele num: 10556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.641389271879719e-5
allele num: 60924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.57e-1

FS
type: SiteQuality
SIO_000300: 2.065e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e0

QD
type: SiteQuality
SIO_000300: 1.559e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

DP
type: SiteQuality
SIO_000300: 1.161432e6

GenotypeQuality
all individuals: 3986
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 746
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2410
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7574
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.370029206919793e-4
allele num: 8902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59704
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.262626262626263e-3
allele num: 792
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.13e0

DP
type: SiteQuality
SIO_000300: 1.143685e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

FS
type: SiteQuality
SIO_000300: 1.905e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.15e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 9.85e0

GenotypeQuality
all individuals: 1101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
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GenotypeQuality
all individuals: 1215
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
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variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2190
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variant carriers: 0

GenotypeQuality
all individuals: 2228
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variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.50779530170984e-4
allele num: 66322
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.208095356344674e-5
allele num: 16108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

FS
type: SiteQuality
SIO_000300: 3.193e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 1.71054e6

QD
type: SiteQuality
SIO_000300: 1.434e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4182
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 768
bin: 2.25e1
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GenotypeQuality
all individuals: 437
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16146
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.606429192006951e-4
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.062596599690881e-3
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.088e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.26e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

DP
type: SiteQuality
SIO_000300: 1.723399e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

GenotypeQuality
all individuals: 1002
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4162
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 713
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variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506704836522525e-5
allele num: 66370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.733977e6

MQ
type: SiteQuality
SIO_000300: 5.877e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

FS
type: SiteQuality
SIO_000300: 1.016e0

VQSLOD
type: SiteQuality
SIO_000300: -2.792e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

QD
type: SiteQuality
SIO_000300: 5.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.57e-1

GenotypeQuality
all individuals: 532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4155
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variant carriers: 1

GenotypeQuality
all individuals: 8191
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.174364040503828e-5
allele num: 16196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.325e0

VQSLOD
type: SiteQuality
SIO_000300: -1.392e0

DP
type: SiteQuality
SIO_000300: 1.749843e6

MQRankSum
type: SiteQuality
SIO_000300: 2.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.19e-1

QD
type: SiteQuality
SIO_000300: 1.598e1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4154
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 572
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 565
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variant carriers: 0

GenotypeQuality
all individuals: 335
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GenotypeQuality
all individuals: 1105
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2107
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.931993817619784e-4
allele num: 10352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.755191e6

VQSLOD
type: SiteQuality
SIO_000300: 5.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

QD
type: SiteQuality
SIO_000300: 1.173e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.63e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 9.13e-1

GenotypeQuality
all individuals: 180
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.75e1
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GenotypeQuality
all individuals: 434
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0