http://identifiers.org/exac.variant/9-13183530-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183530
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183530
    reference: chr 9
allele count: 1
allele frequency: 8.40279645065878e-6
allele num: 119008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.446T>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2536T>G
  hgvsp: ENSP00000415208.1:p.Ser846Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2536T>G
  hgvsp: ENSP00000370403.4:p.Ser846Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2536T>G
  hgvsp: ENSP00000370410.2:p.Ser846Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2536T>G
  hgvsp: ENSP00000444151.1:p.Ser846Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2536T>G
  hgvsp: ENSP00000439807.1:p.Ser846Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2536T>G
  hgvsp: ENSP00000320006.7:p.Ser846Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2536T>G
  hgvsp: ENSP00000446358.1:p.Ser846Ala
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser846Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/9-13183544-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183544
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183544
    reference: chr 9
allele count: 1
allele frequency: 8.388558006878617e-6
allele num: 119210
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2522T>G
  hgvsp: ENSP00000439807.1:p.Phe841Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2522T>G
  hgvsp: ENSP00000370403.4:p.Phe841Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2522T>G
  hgvsp: ENSP00000446358.1:p.Phe841Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2522T>G
  hgvsp: ENSP00000415208.1:p.Phe841Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2522T>G
  hgvsp: ENSP00000444151.1:p.Phe841Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2522T>G
  hgvsp: ENSP00000320006.7:p.Phe841Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.432T>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2522T>G
  hgvsp: ENSP00000370410.2:p.Phe841Cys
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe841Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

9-13183546-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183546
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183546
    reference: chr 9
allele count: 105
allele frequency: 8.807690371936182e-4
allele num: 119214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2520A>G
  hgvsp: ENST00000546205.1:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2520A>G
  hgvsp: ENST00000381022.2:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2520A>G
  hgvsp: ENST00000447879.1:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2520A>G
  hgvsp: ENST00000536827.1:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2520A>G
  hgvsp: ENST00000381015.4:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2520A>G
  hgvsp: ENST00000319217.7:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.430A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2520A>G
  hgvsp: ENST00000541718.1:c.2520A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39238
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12833
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr840Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

9-13183548-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183548
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183548
    reference: chr 9
allele count: 291
allele frequency: 2.441111334809744e-3
allele num: 119208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2518A>G
  hgvsp: ENSP00000370410.2:p.Thr840Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2518A>G
  hgvsp: ENSP00000439807.1:p.Thr840Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2518A>G
  hgvsp: ENSP00000370403.4:p.Thr840Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2518A>G
  hgvsp: ENSP00000446358.1:p.Thr840Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2518A>G
  hgvsp: ENSP00000320006.7:p.Thr840Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2518A>G
  hgvsp: ENSP00000444151.1:p.Thr840Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.428A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2518A>G
  hgvsp: ENSP00000415208.1:p.Thr840Ala
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39041
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46413
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr840Ala
num of homozygotes: 4
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-13183552-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183552
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183552
    reference: chr 9
allele count: 13
allele frequency: 1.090604026845638e-4
allele num: 119200
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2514A>G
  hgvsp: ENST00000536827.1:c.2514A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2514A>G
  hgvsp: ENST00000381015.4:c.2514A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2514A>G
  hgvsp: ENST00000381022.2:c.2514A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2514A>G
  hgvsp: ENST00000541718.1:c.2514A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.424A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2514A>G
  hgvsp: ENST00000319217.7:c.2514A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2514A>G
  hgvsp: ENST00000447879.1:c.2514A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2514A>G
  hgvsp: ENST00000546205.1:c.2514A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39051
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12966
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46647
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu838Glu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

9-13183557-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183557
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183556
    reference: chr 9
allele count: 9
allele frequency: 7.554264802162199e-5
allele num: 119138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.418delA
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2508delA
  hgvsp: ENSP00000415208.1:p.Asp837MetfsTer35
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2508delA
  hgvsp: ENSP00000444151.1:p.Asp837MetfsTer35
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2508delA
  hgvsp: ENSP00000370410.2:p.Asp837MetfsTer35
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2508delA
  hgvsp: ENSP00000320006.7:p.Asp837MetfsTer35
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2508delA
  hgvsp: ENSP00000370403.4:p.Asp837MetfsTer35
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2508delA
  hgvsp: ENSP00000439807.1:p.Asp837MetfsTer35
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2508delA
  hgvsp: ENSP00000446358.1:p.Asp837MetfsTer35
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12999
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp837MetfsTer35
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: CT
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/9-13183563-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183563
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183563
    reference: chr 9
allele count: 1
allele frequency: 8.398562166157153e-6
allele num: 119068
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2503T>G
  hgvsp: ENSP00000444151.1:p.Leu835Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2503T>G
  hgvsp: ENSP00000370410.2:p.Leu835Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2503T>G
  hgvsp: ENSP00000370403.4:p.Leu835Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2503T>G
  hgvsp: ENSP00000320006.7:p.Leu835Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2503T>G
  hgvsp: ENSP00000415208.1:p.Leu835Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2503T>G
  hgvsp: ENSP00000446358.1:p.Leu835Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.413T>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2503T>G
  hgvsp: ENSP00000439807.1:p.Leu835Val
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4544
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu835Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

9-13183563-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183563
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183563
    reference: chr 9
allele count: 15
allele frequency: 1.259784324923573e-4
allele num: 119068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2503T>C
  hgvsp: ENST00000381022.2:c.2503T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.413T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2503T>C
  hgvsp: ENST00000447879.1:c.2503T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2503T>C
  hgvsp: ENST00000319217.7:c.2503T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2503T>C
  hgvsp: ENST00000381015.4:c.2503T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2503T>C
  hgvsp: ENST00000546205.1:c.2503T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2503T>C
  hgvsp: ENST00000541718.1:c.2503T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2503T>C
  hgvsp: ENST00000536827.1:c.2503T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13008
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4544
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu835Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

9-13183568-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183568
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183568
    reference: chr 9
allele count: 1
allele frequency: 8.404915194405689e-6
allele num: 118978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2498C>T
  hgvsp: ENSP00000444151.1:p.Ala833Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2498C>T
  hgvsp: ENSP00000415208.1:p.Ala833Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.408C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2498C>T
  hgvsp: ENSP00000446358.1:p.Ala833Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2498C>T
  hgvsp: ENSP00000320006.7:p.Ala833Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2498C>T
  hgvsp: ENSP00000439807.1:p.Ala833Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2498C>T
  hgvsp: ENSP00000370403.4:p.Ala833Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2498C>T
  hgvsp: ENSP00000370410.2:p.Ala833Val
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4517
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala833Val
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

9-13183571-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183571
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183571
    reference: chr 9
allele count: 1
allele frequency: 8.409014463504877e-6
allele num: 118920
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2495A>G
  hgvsp: ENSP00000439807.1:p.Asp832Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2495A>G
  hgvsp: ENSP00000320006.7:p.Asp832Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2495A>G
  hgvsp: ENSP00000370403.4:p.Asp832Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2495A>G
  hgvsp: ENSP00000415208.1:p.Asp832Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2495A>G
  hgvsp: ENSP00000444151.1:p.Asp832Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2495A>G
  hgvsp: ENSP00000446358.1:p.Asp832Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.405A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2495A>G
  hgvsp: ENSP00000370410.2:p.Asp832Gly
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3210
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp832Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

9-13183572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183572
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183572
    reference: chr 9
allele count: 1
allele frequency: 8.414108777598277e-6
allele num: 118848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.404G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2494G>A
  hgvsp: ENSP00000446358.1:p.Asp832Asn
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2494G>A
  hgvsp: ENSP00000415208.1:p.Asp832Asn
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2494G>A
  hgvsp: ENSP00000370403.4:p.Asp832Asn
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2494G>A
  hgvsp: ENSP00000320006.7:p.Asp832Asn
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2494G>A
  hgvsp: ENSP00000370410.2:p.Asp832Asn
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2494G>A
  hgvsp: ENSP00000444151.1:p.Asp832Asn
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2494G>A
  hgvsp: ENSP00000439807.1:p.Asp832Asn
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38248
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp832Asn
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

9-13183572-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183572
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183572
    reference: chr 9
allele count: 1
allele frequency: 8.414108777598277e-6
allele num: 118848
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2494G>C
  hgvsp: ENSP00000439807.1:p.Asp832His
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2494G>C
  hgvsp: ENSP00000370410.2:p.Asp832His
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2494G>C
  hgvsp: ENSP00000320006.7:p.Asp832His
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2494G>C
  hgvsp: ENSP00000446358.1:p.Asp832His
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2494G>C
  hgvsp: ENSP00000415208.1:p.Asp832His
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2494G>C
  hgvsp: ENSP00000444151.1:p.Asp832His
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2494G>C
  hgvsp: ENSP00000370403.4:p.Asp832His
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.404G>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4494
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp832His
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

9-13183576-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183576
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183576
    reference: chr 9
allele count: 1
allele frequency: 8.420485356775965e-6
allele num: 118758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2490A>G
  hgvsp: ENST00000319217.7:c.2490A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2490A>G
  hgvsp: ENST00000541718.1:c.2490A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2490A>G
  hgvsp: ENST00000546205.1:c.2490A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2490A>G
  hgvsp: ENST00000447879.1:c.2490A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2490A>G
  hgvsp: ENST00000381015.4:c.2490A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.400A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2490A>G
  hgvsp: ENST00000381022.2:c.2490A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2490A>G
  hgvsp: ENST00000536827.1:c.2490A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr830Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/9-13183592-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183592
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183592
    reference: chr 9
allele count: 5
allele frequency: 4.233198435409858e-5
allele num: 118114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-8G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-8G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-8G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-8G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-8G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-8G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-8G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-8G>T
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36416
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12538
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
hgvs: c.2482-8G>T
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

9-13183599-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183599
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183599
    reference: chr 9
allele count: 4
allele frequency: 3.392935907440708e-5
allele num: 117892
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-15T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-15T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-15T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-15T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-15T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-15T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-15T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-15T>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35115
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

9-13183600-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183600
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183600
    reference: chr 9
allele count: 4
allele frequency: 3.396393030601501e-5
allele num: 117772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-16A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-16A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-16A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-16A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-16A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-16A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-16A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-16A>T
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3094
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

9-13183600-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183600
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183600
    reference: chr 9
allele count: 2
allele frequency: 1.698196515300751e-5
allele num: 117772
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-16A>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-16A>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-16A>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-16A>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-16A>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-16A>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-16A>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-16A>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34589
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

9-13183602-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183602
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183602
    reference: chr 9
allele count: 1
allele frequency: 8.493290300662476e-6
allele num: 117740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-18T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-18T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-18T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-18T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-18T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-18T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-18T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-18T>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4109
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

9-13183603-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183603
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183603
    reference: chr 9
allele count: 3
allele frequency: 2.548766397063821e-5
allele num: 117704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-19A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-19A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-19A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-19A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-19A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-19A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-19A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-19A>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3275
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP

9-13183604-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183604
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183604
    reference: chr 9
allele count: 1
allele frequency: 8.499498529586754e-6
allele num: 117654
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-20T>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

9-13183610-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183610
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183610
    reference: chr 9
allele count: 1
allele frequency: 8.51368148614824e-6
allele num: 117458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-26A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-26A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-26A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-26A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-26A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-26A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-26A>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-26A>T
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3890
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

9-13183613-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183613
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183613
    reference: chr 9
allele count: 1
allele frequency: 8.528348229514908e-6
allele num: 117256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-29C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-29C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-29C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-29C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-29C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-29C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-29C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-29C>T
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1764
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3876
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4010
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

9-13183625-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183625
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183625
    reference: chr 9
allele count: 3
allele frequency: 2.579668770529864e-5
allele num: 116294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-41T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-41T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-41T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-41T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-41T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-41T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-41T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-41T>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26554
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2593
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5031
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

9-13183633-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183633
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13183633
    reference: chr 9
allele count: 2
allele frequency: 1.729056799515864e-5
allele num: 115670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2482-49A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2482-49A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.392-49A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2482-49A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2482-49A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2482-49A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2482-49A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2482-49A>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6280
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3666
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3091
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5570
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

9-13186227-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186227
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186227
    reference: chr 9
allele count: 2
allele frequency: 8.078849571820973e-5
allele num: 24756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2481+42A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2481+42A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2481+42A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2481+42A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2481+42A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.391+42A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2481+42A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2481+42A>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19689
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4364
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19783
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7013
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

9-13186250-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186250
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186250
    reference: chr 9
allele count: 2
allele frequency: 7.279609812914028e-5
allele num: 27474
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.391+19T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2481+19T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2481+19T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2481+19T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2481+19T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2481+19T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2481+19T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2481+19T>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26533
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14891
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

9-13186254-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186254
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186254
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 28378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2481+15C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2481+15C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2481+15C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2481+15C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2481+15C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2481+15C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2481+15C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.391+15C>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31064
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1875
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

9-13186268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186268
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186268
    reference: chr 9
allele count: 2
allele frequency: 5.900053100477904e-5
allele num: 33898
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2481+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2481+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2481+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2481+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2481+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2481+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2481+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.391+1G>A
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 6.75e1
  variant carriers: 0
hgvs: c.2481+1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

9-13186277-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186277
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186277
    reference: chr 9
allele count: 1
allele frequency: 2.672082086361693e-5
allele num: 37424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2473T>C
  hgvsp: ENST00000447879.1:c.2473T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2473T>C
  hgvsp: ENST00000381022.2:c.2473T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2473T>C
  hgvsp: ENST00000381015.4:c.2473T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2473T>C
  hgvsp: ENST00000546205.1:c.2473T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.383T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2473T>C
  hgvsp: ENST00000536827.1:c.2473T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2473T>C
  hgvsp: ENST00000319217.7:c.2473T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2473T>C
  hgvsp: ENST00000541718.1:c.2473T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6183
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9959
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu825Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

9-13186279-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186279
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186279
    reference: chr 9
allele count: 1
allele frequency: 2.625636716903849e-5
allele num: 38086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2471A>G
  hgvsp: ENSP00000370410.2:p.Asp824Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2471A>G
  hgvsp: ENSP00000370403.4:p.Asp824Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.381A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2471A>G
  hgvsp: ENSP00000446358.1:p.Asp824Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2471A>G
  hgvsp: ENSP00000320006.7:p.Asp824Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2471A>G
  hgvsp: ENSP00000415208.1:p.Asp824Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2471A>G
  hgvsp: ENSP00000439807.1:p.Asp824Gly
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2471A>G
  hgvsp: ENSP00000444151.1:p.Asp824Gly
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33624
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp824Gly
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

9-13186284-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186284
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186284
    reference: chr 9
allele count: 1
allele frequency: 2.476718842876956e-5
allele num: 40376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2466G>C
  hgvsp: ENSP00000444151.1:p.Arg822Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2466G>C
  hgvsp: ENSP00000415208.1:p.Arg822Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2466G>C
  hgvsp: ENSP00000370410.2:p.Arg822Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2466G>C
  hgvsp: ENSP00000320006.7:p.Arg822Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2466G>C
  hgvsp: ENSP00000370403.4:p.Arg822Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.376G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2466G>C
  hgvsp: ENSP00000446358.1:p.Arg822Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2466G>C
  hgvsp: ENSP00000439807.1:p.Arg822Ser
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11081
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33728
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg822Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

9-13186290-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186290
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186290
    reference: chr 9
allele count: 1
allele frequency: 2.354270646953574e-5
allele num: 42476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2460C>T
  hgvsp: ENST00000536827.1:c.2460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2460C>T
  hgvsp: ENST00000541718.1:c.2460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2460C>T
  hgvsp: ENST00000447879.1:c.2460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2460C>T
  hgvsp: ENST00000546205.1:c.2460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.370C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2460C>T
  hgvsp: ENST00000381022.2:c.2460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2460C>T
  hgvsp: ENST00000319217.7:c.2460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2460C>T
  hgvsp: ENST00000381015.4:c.2460C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34047
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu820Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-13186290-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186290
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186290
    reference: chr 9
allele count: 1
allele frequency: 2.354270646953574e-5
allele num: 42476
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2460C>G
  hgvsp: ENST00000541718.1:c.2460C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.370C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2460C>G
  hgvsp: ENST00000536827.1:c.2460C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2460C>G
  hgvsp: ENST00000381015.4:c.2460C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2460C>G
  hgvsp: ENST00000319217.7:c.2460C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2460C>G
  hgvsp: ENST00000546205.1:c.2460C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2460C>G
  hgvsp: ENST00000381022.2:c.2460C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2460C>G
  hgvsp: ENST00000447879.1:c.2460C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34047
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11881
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu820Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

9-13186292-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186292
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186292
    reference: chr 9
allele count: 137
allele frequency: 3.170855899643568e-3
allele num: 43206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2458C>G
  hgvsp: ENSP00000370403.4:p.Leu820Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2458C>G
  hgvsp: ENSP00000439807.1:p.Leu820Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.368C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2458C>G
  hgvsp: ENSP00000320006.7:p.Leu820Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2458C>G
  hgvsp: ENSP00000370410.2:p.Leu820Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2458C>G
  hgvsp: ENSP00000415208.1:p.Leu820Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2458C>G
  hgvsp: ENSP00000446358.1:p.Leu820Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2458C>G
  hgvsp: ENSP00000444151.1:p.Leu820Val
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 1.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 1.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 33805
  bin: 7.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10836
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 5.75e1
  variant carriers: 3
hgvs: p.Leu820Val
num of homozygotes: 3
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

9-13186297-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186297
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186297
    reference: chr 9
allele count: 1
allele frequency: 2.23563603845294e-5
allele num: 44730
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2453A>G
  hgvsp: ENSP00000439807.1:p.Lys818Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.363A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2453A>G
  hgvsp: ENSP00000370403.4:p.Lys818Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2453A>G
  hgvsp: ENSP00000370410.2:p.Lys818Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2453A>G
  hgvsp: ENSP00000415208.1:p.Lys818Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2453A>G
  hgvsp: ENSP00000446358.1:p.Lys818Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2453A>G
  hgvsp: ENSP00000444151.1:p.Lys818Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2453A>G
  hgvsp: ENSP00000320006.7:p.Lys818Arg
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12549
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys818Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/9-13186301-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186301
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186301
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 45554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2449G>T
  hgvsp: ENSP00000446358.1:p.Asp817Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2449G>T
  hgvsp: ENSP00000320006.7:p.Asp817Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2449G>T
  hgvsp: ENSP00000370410.2:p.Asp817Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2449G>T
  hgvsp: ENSP00000370403.4:p.Asp817Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.359G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2449G>T
  hgvsp: ENSP00000444151.1:p.Asp817Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2449G>T
  hgvsp: ENSP00000439807.1:p.Asp817Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2449G>T
  hgvsp: ENSP00000415208.1:p.Asp817Tyr
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33057
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32993
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4042
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp817Tyr
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/9-13186308-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186308
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186308
    reference: chr 9
allele count: 1
allele frequency: 2.118733844654435e-5
allele num: 47198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2442G>T
  hgvsp: ENST00000381015.4:c.2442G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.352G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2442G>T
  hgvsp: ENST00000536827.1:c.2442G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2442G>T
  hgvsp: ENST00000541718.1:c.2442G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2442G>T
  hgvsp: ENST00000546205.1:c.2442G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2442G>T
  hgvsp: ENST00000319217.7:c.2442G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2442G>T
  hgvsp: ENST00000447879.1:c.2442G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2442G>T
  hgvsp: ENST00000381022.2:c.2442G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly814Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD

9-13186309-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186309
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186309
    reference: chr 9
allele count: 1
allele frequency: 2.116402116402116e-5
allele num: 47250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2441G>C
  hgvsp: ENSP00000320006.7:p.Gly814Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2441G>C
  hgvsp: ENSP00000444151.1:p.Gly814Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2441G>C
  hgvsp: ENSP00000370410.2:p.Gly814Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2441G>C
  hgvsp: ENSP00000415208.1:p.Gly814Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.351G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2441G>C
  hgvsp: ENSP00000370403.4:p.Gly814Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2441G>C
  hgvsp: ENSP00000446358.1:p.Gly814Ala
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2441G>C
  hgvsp: ENSP00000439807.1:p.Gly814Ala
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32734
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly814Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

9-13186311-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186311
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186311
    reference: chr 9
allele count: 67
allele frequency: 1.400326046064457e-3
allele num: 47846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.349A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2439A>G
  hgvsp: ENST00000536827.1:c.2439A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2439A>G
  hgvsp: ENST00000541718.1:c.2439A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2439A>G
  hgvsp: ENST00000319217.7:c.2439A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2439A>G
  hgvsp: ENST00000381015.4:c.2439A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2439A>G
  hgvsp: ENST00000546205.1:c.2439A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2439A>G
  hgvsp: ENST00000447879.1:c.2439A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2439A>G
  hgvsp: ENST00000381022.2:c.2439A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 1.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32291
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12065
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13471
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 32915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 9.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Ala813Ala
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

9-13186312-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186312
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186312
    reference: chr 9
allele count: 1
allele frequency: 2.087944210130705e-5
allele num: 47894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2438C>T
  hgvsp: ENSP00000446358.1:p.Ala813Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2438C>T
  hgvsp: ENSP00000320006.7:p.Ala813Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2438C>T
  hgvsp: ENSP00000444151.1:p.Ala813Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.348C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2438C>T
  hgvsp: ENSP00000439807.1:p.Ala813Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2438C>T
  hgvsp: ENSP00000370403.4:p.Ala813Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2438C>T
  hgvsp: ENSP00000370410.2:p.Ala813Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2438C>T
  hgvsp: ENSP00000415208.1:p.Ala813Val
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12068
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13469
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala813Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

9-13186313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186313
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186313
    reference: chr 9
allele count: 1
allele frequency: 2.082378909666403e-5
allele num: 48022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2437G>A
  hgvsp: ENSP00000446358.1:p.Ala813Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2437G>A
  hgvsp: ENSP00000370410.2:p.Ala813Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2437G>A
  hgvsp: ENSP00000439807.1:p.Ala813Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2437G>A
  hgvsp: ENSP00000444151.1:p.Ala813Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2437G>A
  hgvsp: ENSP00000370403.4:p.Ala813Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.347G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2437G>A
  hgvsp: ENSP00000320006.7:p.Ala813Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2437G>A
  hgvsp: ENSP00000415208.1:p.Ala813Thr
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33065
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala813Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

9-13186321-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186321
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186321
    reference: chr 9
allele count: 36
allele frequency: 7.477256677605617e-4
allele num: 48146
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2429G>C
  hgvsp: ENSP00000439807.1:p.Cys810Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2429G>C
  hgvsp: ENSP00000370410.2:p.Cys810Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2429G>C
  hgvsp: ENSP00000446358.1:p.Cys810Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2429G>C
  hgvsp: ENSP00000370403.4:p.Cys810Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2429G>C
  hgvsp: ENSP00000415208.1:p.Cys810Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2429G>C
  hgvsp: ENSP00000320006.7:p.Cys810Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.339G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2429G>C
  hgvsp: ENSP00000444151.1:p.Cys810Ser
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5135
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11468
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31950
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33531
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys810Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

9-13186327-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186327
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186327
    reference: chr 9
allele count: 3
allele frequency: 6.320047189685683e-5
allele num: 47468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2423A>G
  hgvsp: ENSP00000415208.1:p.His808Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2423A>G
  hgvsp: ENSP00000320006.7:p.His808Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.333A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2423A>G
  hgvsp: ENSP00000370403.4:p.His808Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2423A>G
  hgvsp: ENSP00000370410.2:p.His808Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2423A>G
  hgvsp: ENSP00000439807.1:p.His808Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2423A>G
  hgvsp: ENSP00000446358.1:p.His808Arg
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2423A>G
  hgvsp: ENSP00000444151.1:p.His808Arg
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5847
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11980
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33662
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4352
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His808Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

9-13186328-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186328
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186328
    reference: chr 9
allele count: 1
allele frequency: 2.120890774125132e-5
allele num: 47150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2422C>T
  hgvsp: ENSP00000370403.4:p.His808Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2422C>T
  hgvsp: ENSP00000446358.1:p.His808Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2422C>T
  hgvsp: ENSP00000320006.7:p.His808Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2422C>T
  hgvsp: ENSP00000370410.2:p.His808Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2422C>T
  hgvsp: ENSP00000415208.1:p.His808Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2422C>T
  hgvsp: ENSP00000444151.1:p.His808Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2422C>T
  hgvsp: ENSP00000439807.1:p.His808Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.332C>T
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4587
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11502
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His808Tyr
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

9-13186333-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186333
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186333
    reference: chr 9
allele count: 7
allele frequency: 1.499250374812594e-4
allele num: 46690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2417C>T
  hgvsp: ENSP00000370410.2:p.Pro806Leu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2417C>T
  hgvsp: ENSP00000320006.7:p.Pro806Leu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2417C>T
  hgvsp: ENSP00000415208.1:p.Pro806Leu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.327C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2417C>T
  hgvsp: ENSP00000370403.4:p.Pro806Leu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2417C>T
  hgvsp: ENSP00000446358.1:p.Pro806Leu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2417C>T
  hgvsp: ENSP00000439807.1:p.Pro806Leu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2417C>T
  hgvsp: ENSP00000444151.1:p.Pro806Leu
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro806Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-13186335-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186335
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186335
    reference: chr 9
allele count: 1
allele frequency: 2.160107141314209e-5
allele num: 46294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2415C>T
  hgvsp: ENST00000546205.1:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2415C>T
  hgvsp: ENST00000536827.1:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.325C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2415C>T
  hgvsp: ENST00000381015.4:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2415C>T
  hgvsp: ENST00000319217.7:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2415C>T
  hgvsp: ENST00000381022.2:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2415C>T
  hgvsp: ENST00000447879.1:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2415C>T
  hgvsp: ENST00000541718.1:c.2415C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31454
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr805Tyr
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS

9-13186340-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186340
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186340
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 45812
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2410C>G
  hgvsp: ENSP00000320006.7:p.Leu804Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2410C>G
  hgvsp: ENSP00000370410.2:p.Leu804Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2410C>G
  hgvsp: ENSP00000370403.4:p.Leu804Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2410C>G
  hgvsp: ENSP00000444151.1:p.Leu804Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2410C>G
  hgvsp: ENSP00000446358.1:p.Leu804Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.320C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2410C>G
  hgvsp: ENSP00000439807.1:p.Leu804Val
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2410C>G
  hgvsp: ENSP00000415208.1:p.Leu804Val
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31257
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5829
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33916
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu804Val
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

9-13186346-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186346
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186346
    reference: chr 9
allele count: 1
allele frequency: 2.229753835176596e-5
allele num: 44848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2404T>A
  hgvsp: ENSP00000444151.1:p.Ser802Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2404T>A
  hgvsp: ENSP00000320006.7:p.Ser802Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2404T>A
  hgvsp: ENSP00000446358.1:p.Ser802Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2404T>A
  hgvsp: ENSP00000415208.1:p.Ser802Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.314T>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2404T>A
  hgvsp: ENSP00000439807.1:p.Ser802Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2404T>A
  hgvsp: ENSP00000370403.4:p.Ser802Thr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2404T>A
  hgvsp: ENSP00000370410.2:p.Ser802Thr
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6991
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33070
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser802Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/9-13186349-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186349
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186349
    reference: chr 9
allele count: 4
allele frequency: 9.013475145342287e-5
allele num: 44378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2401G>T
  hgvsp: ENSP00000320006.7:p.Asp801Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2401G>T
  hgvsp: ENSP00000370403.4:p.Asp801Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2401G>T
  hgvsp: ENSP00000446358.1:p.Asp801Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2401G>T
  hgvsp: ENSP00000444151.1:p.Asp801Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2401G>T
  hgvsp: ENSP00000370410.2:p.Asp801Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2401G>T
  hgvsp: ENSP00000415208.1:p.Asp801Tyr
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.311G>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2401G>T
  hgvsp: ENSP00000439807.1:p.Asp801Tyr
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7491
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30216
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9394
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7487
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp801Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

9-13186350-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186350
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186350
    reference: chr 9
allele count: 1
allele frequency: 2.261624751221277e-5
allele num: 44216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.310G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2400G>A
  hgvsp: ENST00000319217.7:c.2400G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2400G>A
  hgvsp: ENST00000381022.2:c.2400G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2400G>A
  hgvsp: ENST00000381015.4:c.2400G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2400G>A
  hgvsp: ENST00000546205.1:c.2400G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2400G>A
  hgvsp: ENST00000447879.1:c.2400G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2400G>A
  hgvsp: ENST00000541718.1:c.2400G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2400G>A
  hgvsp: ENST00000536827.1:c.2400G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7511
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7740
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu800Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

9-13186355-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186355
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186355
    reference: chr 9
allele count: 165
allele frequency: 3.795895831416214e-3
allele num: 43468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2395A>G
  hgvsp: ENSP00000415208.1:p.Lys799Glu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2395A>G
  hgvsp: ENSP00000370410.2:p.Lys799Glu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2395A>G
  hgvsp: ENSP00000446358.1:p.Lys799Glu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2395A>G
  hgvsp: ENSP00000320006.7:p.Lys799Glu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2395A>G
  hgvsp: ENSP00000439807.1:p.Lys799Glu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2395A>G
  hgvsp: ENSP00000444151.1:p.Lys799Glu
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.305A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2395A>G
  hgvsp: ENSP00000370403.4:p.Lys799Glu
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 1.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29417
  bin: 7.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1917
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 9.75e1
  variant carriers: 160
hgvs: p.Lys799Glu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

9-13186366-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186366
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186366
    reference: chr 9
allele count: 1
allele frequency: 2.432853250291942e-5
allele num: 41104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2384A>G
  hgvsp: ENSP00000444151.1:p.Tyr795Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2384A>G
  hgvsp: ENSP00000320006.7:p.Tyr795Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.294A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2384A>G
  hgvsp: ENSP00000415208.1:p.Tyr795Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2384A>G
  hgvsp: ENSP00000370410.2:p.Tyr795Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2384A>G
  hgvsp: ENSP00000446358.1:p.Tyr795Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2384A>G
  hgvsp: ENSP00000439807.1:p.Tyr795Cys
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2384A>G
  hgvsp: ENSP00000370403.4:p.Tyr795Cys
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr795Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

9-13186371-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186371
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186371
    reference: chr 9
allele count: 11
allele frequency: 2.770501712673786e-4
allele num: 39704
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2379A>G
  hgvsp: ENST00000541718.1:c.2379A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2379A>G
  hgvsp: ENST00000447879.1:c.2379A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2379A>G
  hgvsp: ENST00000319217.7:c.2379A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.289A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2379A>G
  hgvsp: ENST00000381015.4:c.2379A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2379A>G
  hgvsp: ENST00000546205.1:c.2379A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2379A>G
  hgvsp: ENST00000536827.1:c.2379A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2379A>G
  hgvsp: ENST00000381022.2:c.2379A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25466
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7674
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu793Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

9-13186379-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186379
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186379
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 35976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2371C>T
  hgvsp: ENSP00000320006.7:p.Pro791Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.281C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2371C>T
  hgvsp: ENSP00000444151.1:p.Pro791Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2371C>T
  hgvsp: ENSP00000439807.1:p.Pro791Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2371C>T
  hgvsp: ENSP00000370403.4:p.Pro791Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2371C>T
  hgvsp: ENSP00000446358.1:p.Pro791Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2371C>T
  hgvsp: ENSP00000415208.1:p.Pro791Ser
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2371C>T
  hgvsp: ENSP00000370410.2:p.Pro791Ser
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22039
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19055
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro791Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

9-13186386-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186386
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186386
    reference: chr 9
allele count: 1
allele frequency: 3.078438615933998e-5
allele num: 32484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2365-1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2365-1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2365-1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2365-1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2365-1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.275-1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2365-1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2365-1G>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23822
  bin: 7.5e0
  variant carriers: 0
hgvs: c.2365-1G>C
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

9-13186393-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186393
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186394
    reference: chr 9
allele count: 1
allele frequency: 3.367230116506162e-5
allele num: 29698
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2365-9dupT
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.275-9dupT
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2365-9dupT
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2365-9dupT
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2365-9dupT
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2365-9dupT
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2365-9dupT
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2365-9dupT
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 16382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26753
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

9-13186397-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186397
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186397
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 28784
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2365-12T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2365-12T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.275-12T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2365-12T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2365-12T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2365-12T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2365-12T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2365-12T>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14972
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6506
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD

9-13186399-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186399
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186399
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 27326
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2365-14T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2365-14T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2365-14T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2365-14T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2365-14T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.275-14T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2365-14T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2365-14T>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13372
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1989
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

9-13186418-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186418
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186418
    reference: chr 9
allele count: 1
allele frequency: 4.021555537681976e-5
allele num: 24866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2365-33C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2365-33C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2365-33C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.275-33C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2365-33C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2365-33C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2365-33C>T
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2365-33C>T
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-13186422-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186422
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186422
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 24080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2365-37C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2365-37C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.275-37C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2365-37C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2365-37C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2365-37C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2365-37C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2365-37C>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9815
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27739
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3185
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

9-13186435-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13186435
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13186435
    reference: chr 9
allele count: 1
allele frequency: 4.301075268817204e-5
allele num: 23250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2365-50C>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2365-50C>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.275-50C>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2365-50C>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2365-50C>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2365-50C>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2365-50C>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2365-50C>A
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9847
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4095
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

9-13188743-TTATAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188743
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188737
    reference: chr 9
allele count: 1
allele frequency: 8.411560849231184e-6
allele num: 118884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+34_2364+39delTTTATA
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+34_2364+39delTTTATA
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+34_274+39delTTTATA
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+34_2364+39delTTTATA
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+34_2364+39delTTTATA
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+34_2364+39delTTTATA
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+34_2364+39delTTTATA
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+34_2364+39delTTTATA
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6948
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: TTATAAA
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

9-13188744-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188744
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188744
    reference: chr 9
allele count: 52
allele frequency: 4.373423044575273e-4
allele num: 118900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+39A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+39A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+39A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+39A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+39A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+39A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+39A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+39A>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6952
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

9-13188746-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188746
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188746
    reference: chr 9
allele count: 1
allele frequency: 8.409014463504877e-6
allele num: 118920
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+37A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+37A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+37A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+37A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+37A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+37A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+37A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+37A>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10473
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6959
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2840
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

9-13188752-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188752
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188752
    reference: chr 9
allele count: 1
allele frequency: 8.402655239055541e-6
allele num: 119010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+31A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+31A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+31A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+31A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+31A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+31A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+31A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+31A>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6992
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 160
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 820
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genotype quality: GenotypeQuality
  all individuals: 519
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2840
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

9-13188756-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188756
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188756
    reference: chr 9
allele count: 1
allele frequency: 8.392923087252828e-6
allele num: 119148
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+27C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+27C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+27C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+27C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+27C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+27C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+27C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+27C>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
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genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43023
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

9-13188763-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188763
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188763
    reference: chr 9
allele count: 1
allele frequency: 8.360365180751095e-6
allele num: 119612
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+20T>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+20T>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

9-13188770-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188770
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188770
    reference: chr 9
allele count: 6
allele frequency: 5.002417835287055e-5
allele num: 119942
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+13A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+13A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+13A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+13A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+13A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+13A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+13A>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+13A>G
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7135
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

9-13188782-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188782
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188782
    reference: chr 9
allele count: 1
allele frequency: 8.307303781484682e-6
allele num: 120376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+1G>C
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+1G>C
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
hgvs: c.2364+1G>C
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

9-13188782-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188782
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188782
    reference: chr 9
allele count: 4
allele frequency: 3.322921512593873e-5
allele num: 120376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364+1G>A
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274+1G>A
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
hgvs: c.2364+1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

9-13188783-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13188783
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 13188783
    reference: chr 9
allele count: 4
allele frequency: 3.321707357581797e-5
allele num: 120420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000320006
  ensembl transcript: ENST00000319217
  gene symbol: MPDZ
  hgvsc: ENST00000319217.7:c.2364C>G
  hgvsp: ENST00000319217.7:c.2364C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000415208
  ensembl transcript: ENST00000447879
  gene symbol: MPDZ
  hgvsc: ENST00000447879.1:c.2364C>G
  hgvsp: ENST00000447879.1:c.2364C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000439807
  ensembl transcript: ENST00000541718
  gene symbol: MPDZ
  hgvsc: ENST00000541718.1:c.2364C>G
  hgvsp: ENST00000541718.1:c.2364C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107186
  ensembl transcript: ENST00000539508
  gene symbol: MPDZ
  hgvsc: ENST00000539508.1:n.274C>G
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000446358
  ensembl transcript: ENST00000546205
  gene symbol: MPDZ
  hgvsc: ENST00000546205.1:c.2364C>G
  hgvsp: ENST00000546205.1:c.2364C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370403
  ensembl transcript: ENST00000381015
  gene symbol: MPDZ
  hgvsc: ENST00000381015.4:c.2364C>G
  hgvsp: ENST00000381015.4:c.2364C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000370410
  ensembl transcript: ENST00000381022
  gene symbol: MPDZ
  hgvsc: ENST00000381022.2:c.2364C>G
  hgvsp: ENST00000381022.2:c.2364C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000107186
  ensembl protein: ENSP00000444151
  ensembl transcript: ENST00000536827
  gene symbol: MPDZ
  hgvsc: ENST00000536827.1:c.2364C>G
  hgvsp: ENST00000536827.1:c.2364C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7208
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 4
hgvs: c.2364C>G
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 1253
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3178
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46243
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514830187535977e-5
allele num: 66014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.076e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.817e1

DP
type: SiteQuality
SIO_000300: 1.502081e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.248e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.721e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: -2.464e0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3178
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46687
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.893632159373888e-5
allele num: 11244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
SIO_000300: 5.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

DP
type: SiteQuality
SIO_000300: 1.505626e6

QD
type: SiteQuality
SIO_000300: 1.389e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3275
bin: 9.75e1
variant carriers: 105

GenotypeQuality
all individuals: 46559
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4536
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.157509157509158e-4
allele num: 6552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.669039145907473e-4
allele num: 11240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 92
allele frequency: 1.391662128637986e-3
allele num: 66108
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.112687641373637e-4
allele num: 9726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.509514e6

FS
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.264e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

GenotypeQuality
all individuals: 459
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4527
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3440
bin: 9.75e1
variant carriers: 285

GenotypeQuality
all individuals: 804
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1241
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.226650062266501e-4
allele num: 11242
num of homozygotes: 0

African
type: Population
allele count: 280
allele frequency: 2.87828947368421e-2
allele num: 9728
num of homozygotes: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.051803437424352e-5
allele num: 66096
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

DP
type: SiteQuality
SIO_000300: 1.520465e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.343e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.0e-3

GenotypeQuality
all individuals: 363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4553
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 467
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.966598087861551e-4
allele num: 66104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.336e1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 2.448e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.50907e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.93e-1

GenotypeQuality
all individuals: 3213
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4534
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46594
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1236
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.633587786259542e-4
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.541463562324018e-5
allele num: 66058
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

QD
type: SiteQuality
SIO_000300: 1.441e1

FS
type: SiteQuality
SIO_000300: 9.365e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.19e-1

MQ
type: SiteQuality
SIO_000300: 6.017e1

DP
type: SiteQuality
SIO_000300: 1.508993e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-2

GenotypeQuality
all individuals: 177
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 3224
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
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GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514600751241973e-5
allele num: 66024
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

FS
type: SiteQuality
SIO_000300: 5.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

DP
type: SiteQuality
SIO_000300: 1.507123e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

QD
type: SiteQuality
SIO_000300: 1.3e1

GenotypeQuality
all individuals: 1066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3224
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66024
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.336183858898985e-3
allele num: 11226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

FS
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 1.3e1

DP
type: SiteQuality
SIO_000300: 1.507123e6

GenotypeQuality
all individuals: 227
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3209
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.16370808678501e-5
allele num: 16224
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.505681e6

FS
type: SiteQuality
SIO_000300: 1.624e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.196e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.339e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.107e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 135
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4515
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 9.25e1
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GenotypeQuality
all individuals: 1220
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46143
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65976
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.928571428571429e-5
allele num: 11200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.239e0

DP
type: SiteQuality
SIO_000300: 1.50357e6

FS
type: SiteQuality
SIO_000300: 4.561e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.27e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.074e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.352e0

GenotypeQuality
all individuals: 45778
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4494
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
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variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.17283950617284e-5
allele num: 16200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.55e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.502314e6

QD
type: SiteQuality
SIO_000300: 1.305e1

GenotypeQuality
all individuals: 366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 820
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variant carriers: 0

GenotypeQuality
all individuals: 1285
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variant carriers: 0

GenotypeQuality
all individuals: 465
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variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
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variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65940
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.933357155619081e-5
allele num: 11194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e-1

DP
type: SiteQuality
SIO_000300: 1.502314e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.305e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.55e0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 165
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GenotypeQuality
all individuals: 3211
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4461
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variant carriers: 0

GenotypeQuality
all individuals: 226
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variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 464
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variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517404631118934e-5
allele num: 65902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.075e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

DP
type: SiteQuality
SIO_000300: 1.499335e6

GenotypeQuality
all individuals: 182
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
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variant carriers: 0

GenotypeQuality
all individuals: 786
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variant carriers: 0

GenotypeQuality
all individuals: 361
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variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43618
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.039933444259567e-4
allele num: 9616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.102398242509306e-5
allele num: 65548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

MQRankSum
type: SiteQuality
SIO_000300: -2.35e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

FS
type: SiteQuality
SIO_000300: 8.100000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.564e0

DP
type: SiteQuality
SIO_000300: 1.476147e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42010
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2916
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
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variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11084
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.196172248803828e-4
allele num: 8360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.584492191081635e-5
allele num: 65438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16024
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.341e1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

DP
type: SiteQuality
SIO_000300: 1.457763e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e-1

FS
type: SiteQuality
SIO_000300: 4.303e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
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variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 242
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GenotypeQuality
all individuals: 360
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GenotypeQuality
all individuals: 40959
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 3216
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 461
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.613369467028004e-4
allele num: 11070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

FS
type: SiteQuality
SIO_000300: 3.727e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.451501e6

QD
type: SiteQuality
SIO_000300: 1.326e1

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40959
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.75e1
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GenotypeQuality
all individuals: 1164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 48
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GenotypeQuality
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GenotypeQuality
all individuals: 794
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variant carriers: 0

GenotypeQuality
all individuals: 3094
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.250156269533692e-4
allele num: 15998
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

FS
type: SiteQuality
SIO_000300: 3.727e0

MQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 1.451501e6

QD
type: SiteQuality
SIO_000300: 1.326e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 362
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variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.19703136222169e-4
allele num: 8354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

FS
type: SiteQuality
SIO_000300: 4.014e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.805e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

DP
type: SiteQuality
SIO_000300: 1.44769e6

QD
type: SiteQuality
SIO_000300: 2.991e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.877581674802854e-4
allele num: 15978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.424e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 5.147e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.22e0

DP
type: SiteQuality
SIO_000300: 1.443704e6

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15976
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.197604790419162e-4
allele num: 8350
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.437119e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

FS
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.860000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.38e0

QD
type: SiteQuality
SIO_000300: 1.21e1

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 548
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 462
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GenotypeQuality
all individuals: 2797
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.047339757017176e-4
allele num: 9548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65218
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.768e1

VQSLOD
type: SiteQuality
SIO_000300: -1.378e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.410051e6

QD
type: SiteQuality
SIO_000300: 1.399e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e0

GenotypeQuality
all individuals: 457
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 351
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535579374097847e-5
allele num: 65122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.544e0

DP
type: SiteQuality
SIO_000300: 1.399999e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.777e0

VQSLOD
type: SiteQuality
SIO_000300: -1.242e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.652e0

QD
type: SiteQuality
SIO_000300: 1.216e1

GenotypeQuality
all individuals: 782
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 356
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.640945515299651e-5
allele num: 64642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

QD
type: SiteQuality
SIO_000300: 1.435e1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

FS
type: SiteQuality
SIO_000300: 3.705e0

DP
type: SiteQuality
SIO_000300: 1.349185e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1129
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9374
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.277791975466394e-4
allele num: 15652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.347347e6

QD
type: SiteQuality
SIO_000300: 1.021e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.706775900324288e-4
allele num: 11718
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.377e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-2

QD
type: SiteQuality
SIO_000300: 1.611e1

DP
type: SiteQuality
SIO_000300: 4.93369e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.95e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1302
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GenotypeQuality
all individuals: 258
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.75709953129308e-4
allele num: 7254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 978
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2946
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-2

DP
type: SiteQuality
SIO_000300: 5.92843e5

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.76e-2

QD
type: SiteQuality
SIO_000300: 1.041e1

GenotypeQuality
all individuals: 13278
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 267
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3020
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.304e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 6.12414e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.53e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 5.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1274
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.508151492350138e-4
allele num: 7974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

QD
type: SiteQuality
SIO_000300: 7.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.034e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.67e-2

FS
type: SiteQuality
SIO_000300: 2.318e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.88667e5

VQSLOD
type: SiteQuality
SIO_000300: -5.185e-1

GenotypeQuality
all individuals: 1167
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.36480686695279e-4
allele num: 1864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 340
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.06e0

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

FS
type: SiteQuality
SIO_000300: 2.963e0

VQSLOD
type: SiteQuality
SIO_000300: -2.074e0

DP
type: SiteQuality
SIO_000300: 7.23798e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.32e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.728e1

GenotypeQuality
all individuals: 1555
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5936
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.14827018121911e-5
allele num: 19424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.998e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.57e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

FS
type: SiteQuality
SIO_000300: 2.869e0

QD
type: SiteQuality
SIO_000300: 2.152e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

DP
type: SiteQuality
SIO_000300: 7.30285e5

GenotypeQuality
all individuals: 334
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5227
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
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variant carriers: 0

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 311
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variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
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variant carriers: 0

GenotypeQuality
all individuals: 1170
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variant carriers: 1

GenotypeQuality
all individuals: 497
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variant carriers: 0

GenotypeQuality
all individuals: 297
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variant carriers: 0

GenotypeQuality
all individuals: 499
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variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2638
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.668534080298786e-4
allele num: 2142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3998
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 7.5209e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.682e0

MQRankSum
type: SiteQuality
SIO_000300: -1.324e0

MQ
type: SiteQuality
SIO_000300: 5.747e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.747e0

GenotypeQuality
all individuals: 33561
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11881
bin: 6.25e1
variant carriers: 2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4575
bin: 7.5e0
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GenotypeQuality
all individuals: 1338
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.146788990825688e-4
allele num: 8720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2160
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.337e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.077e1

VQSLOD
type: SiteQuality
SIO_000300: -2.001e-1

DP
type: SiteQuality
SIO_000300: 7.69785e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 170
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
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variant carriers: 1

GenotypeQuality
all individuals: 4575
bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 4.194630872483221e-4
allele num: 2384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.337e0

DP
type: SiteQuality
SIO_000300: 7.69785e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

GenotypeQuality
all individuals: 1282
bin: 9.75e1
variant carriers: 129

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 4

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 308
bin: 4.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 4

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.25e1
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GenotypeQuality
all individuals: 1015
bin: 2.75e1
variant carriers: 1

African
type: Population
allele count: 117
allele frequency: 2.709587772116721e-2
allele num: 4318
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2780
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 5.840071877807727e-3
allele num: 2226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 3.137606454504706e-4
allele num: 22310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

DP
type: SiteQuality
SIO_000300: 7.76771e5

BaseQRankSum
type: SiteQuality
SIO_000300: -8.59e-1

QD
type: SiteQuality
SIO_000300: 1.297e1

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeQuality
all individuals: 4224
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
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GenotypeQuality
all individuals: 33158
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.25e1
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GenotypeQuality
all individuals: 539
bin: 7.75e1
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GenotypeQuality
all individuals: 252
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23266
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.843197540353574e-4
allele num: 2602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.363e0

VQSLOD
type: SiteQuality
SIO_000300: -1.525e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

DP
type: SiteQuality
SIO_000300: 7.85391e5

QD
type: SiteQuality
SIO_000300: 6.27e0

GenotypeQuality
all individuals: 12816
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2872
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 4.4e0

DP
type: SiteQuality
SIO_000300: 7.94434e5

VQSLOD
type: SiteQuality
SIO_000300: -1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

FS
type: SiteQuality
SIO_000300: 3.136e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
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variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.034535624949568e-5
allele num: 24786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2936
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8988
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.377e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.531e0

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: -3.786e0

DP
type: SiteQuality
SIO_000300: 8.0543e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

QD
type: SiteQuality
SIO_000300: 2.8e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2922
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.028359651949726e-5
allele num: 24824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 4.401e0

DP
type: SiteQuality
SIO_000300: 8.05066e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.377e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.219e1

GenotypeQuality
all individuals: 3786
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 260
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 189
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
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variant carriers: 1

GenotypeQuality
all individuals: 541
bin: 7.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4602
num of homozygotes: 0

Latino
type: Population
allele count: 67
allele frequency: 2.34593837535014e-2
allele num: 2856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25088
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
SIO_000300: 8.09136e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

QD
type: SiteQuality
SIO_000300: 1.039e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 460
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variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2978
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.163565556036348e-4
allele num: 4622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.375e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

DP
type: SiteQuality
SIO_000300: 8.09945e5

MQRankSum
type: SiteQuality
SIO_000300: 2.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.86e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.35795836131632e-4
allele num: 2978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.102e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.409e0

DP
type: SiteQuality
SIO_000300: 8.10225e5

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

QD
type: SiteQuality
SIO_000300: 8.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.22e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 39

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2786
num of homozygotes: 0

East Asian
type: Population
allele count: 36
allele frequency: 1.212121212121212e-2
allele num: 2970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

DP
type: SiteQuality
SIO_000300: 8.0613e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.109e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 524
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2958
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.20375571783966e-4
allele num: 24922
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2858
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

FS
type: SiteQuality
SIO_000300: 4.364e0

QD
type: SiteQuality
SIO_000300: 8.41e0

DP
type: SiteQuality
SIO_000300: 7.91771e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.126e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 138
bin: 9.25e1
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GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 1572
bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 267
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GenotypeQuality
all individuals: 198
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GenotypeQuality
all individuals: 523
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GenotypeQuality
all individuals: 329
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.047272138578598e-5
allele num: 24708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9026
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: -1.265e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

DP
type: SiteQuality
SIO_000300: 7.86668e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e0

QD
type: SiteQuality
SIO_000300: 6.91e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 9.75e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2920
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 6.659267480577136e-4
allele num: 9010
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.217294900221729e-4
allele num: 4510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2780
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.371e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 9.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

DP
type: SiteQuality
SIO_000300: 7.79557e5

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 6.830000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

GenotypeQuality
all individuals: 10690
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 326
bin: 8.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.241147467503362e-4
allele num: 4462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24174
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e-1

DP
type: SiteQuality
SIO_000300: 7.70995e5

QD
type: SiteQuality
SIO_000300: 1.071e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.22e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.74e-1

GenotypeQuality
all individuals: 523
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.189e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.332e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 7.63665e5

QD
type: SiteQuality
SIO_000300: 6.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
all individuals: 524
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 507
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GenotypeQuality
all individuals: 108
bin: 8.75e1
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GenotypeQuality
all individuals: 9606
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.287061647946498e-5
allele num: 23326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.44029e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.48e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.093e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

QD
type: SiteQuality
SIO_000300: 6.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

GenotypeQuality
all individuals: 784
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32896
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 8.25e1
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GenotypeQuality
all individuals: 508
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variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
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GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
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GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1646
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.25123818099955e-4
allele num: 8884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.688097306689835e-5
allele num: 23020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.333e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

DP
type: SiteQuality
SIO_000300: 7.39326e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.61e-2

FS
type: SiteQuality
SIO_000300: 2.1915e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.28e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.5e0
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GenotypeQuality
all individuals: 139
bin: 9.25e1
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GenotypeQuality
all individuals: 130
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GenotypeQuality
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GenotypeQuality
all individuals: 98
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.366049598323437e-5
allele num: 22904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2546
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.63e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.932e1

VQSLOD
type: SiteQuality
SIO_000300: -6.272e-1

MQ
type: SiteQuality
SIO_000300: 5.787e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 7.36492e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

GenotypeQuality
all individuals: 955
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 3

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 5

GenotypeQuality
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bin: 4.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2474
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 6.78119349005425e-4
allele num: 8848
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 1.705029838022165e-3
allele num: 2346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.65764447695684e-4
allele num: 2734
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 9.555661729574773e-4
allele num: 4186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 150
allele frequency: 6.670224119530417e-3
allele num: 22488
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.422e1

VQSLOD
type: SiteQuality
SIO_000300: 6.09e0

DP
type: SiteQuality
SIO_000300: 7.25763e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.84e-2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 326
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GenotypeQuality
all individuals: 239
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GenotypeQuality
all individuals: 1165
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2100
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.144164759725401e-4
allele num: 8740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4016
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.35e-2

FS
type: SiteQuality
SIO_000300: 4.14e0

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

MQ
type: SiteQuality
SIO_000300: 5.792e1

QD
type: SiteQuality
SIO_000300: 8.98e0

VQSLOD
type: SiteQuality
SIO_000300: -1.639e0

DP
type: SiteQuality
SIO_000300: 6.91526e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
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allele count: 11
allele frequency: 1.269621421975993e-3
allele num: 8664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20124
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1924
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

FS
type: SiteQuality
SIO_000300: 1.236e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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SIO_000300: -3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.28e-2

DP
type: SiteQuality
SIO_000300: 6.71272e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.272e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.368e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -3.63e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 7.05e0

DP
type: SiteQuality
SIO_000300: 6.29973e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.204819277108434e-4
allele num: 8300
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.158e1

DP
type: SiteQuality
SIO_000300: 5.93287e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.37e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.285e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.06e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.298e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.313452617627568e-4
allele num: 3018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2118
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.63153e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.98e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.74e-1

QD
type: SiteQuality
SIO_000300: 6.59e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 136
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 5.46652e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.18e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.196e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1982
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8062
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 994
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2808
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.58e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1840
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Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 9.1726288754357e-5
allele num: 10902
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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SIO_000300: -6.370000000000001e-2

QD
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1768
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 514
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African
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allele frequency: 0.0e0
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Other
type: Population
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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African
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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MQ
type: SiteQuality
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FS
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1696
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.025010250102501e-4
allele num: 9756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.1827e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e0

DP
type: SiteQuality
SIO_000300: 1.746734e6

MQ
type: SiteQuality
SIO_000300: 4.964e1

QD
type: SiteQuality
SIO_000300: 9.460000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

MQRankSum
type: SiteQuality
SIO_000300: -9.917999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -2.703e0

GenotypeQuality
all individuals: 881
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 52

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1697
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 52
allele frequency: 4.523312456506611e-3
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.748717e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.68e-1

QD
type: SiteQuality
SIO_000300: 1.699e1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 75
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 805
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515978412467406e-5
allele num: 65964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.745113e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.78e0

VQSLOD
type: SiteQuality
SIO_000300: -4.038e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

QD
type: SiteQuality
SIO_000300: 1.661e1

GenotypeQuality
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1704
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 191
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GenotypeQuality
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GenotypeQuality
all individuals: 424
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
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GenotypeQuality
all individuals: 426
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variant carriers: 0

GenotypeQuality
all individuals: 1576
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.363752068219422e-5
allele num: 15714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.217e-1

QD
type: SiteQuality
SIO_000300: 1.778e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.11e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

DP
type: SiteQuality
SIO_000300: 1.753041e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.597e0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2838
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 763
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GenotypeQuality
all individuals: 936
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7030
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variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.025220422390814e-4
allele num: 9754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.526e0

MQRankSum
type: SiteQuality
SIO_000300: -1.67e-1

FS
type: SiteQuality
SIO_000300: 5.117e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

DP
type: SiteQuality
SIO_000300: 1.759376e6

QD
type: SiteQuality
SIO_000300: 1.377e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
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variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 51
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GenotypeQuality
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GenotypeQuality
all individuals: 17
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1601
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GenotypeQuality
all individuals: 43888
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.236746912810279e-5
allele num: 16034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66210
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.702e0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 3.273e0

QD
type: SiteQuality
SIO_000300: 1.307e1

MQRankSum
type: SiteQuality
SIO_000300: -5.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

DP
type: SiteQuality
SIO_000300: 1.76966e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 429
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GenotypeQuality
all individuals: 2836
bin: 9.75e1
variant carriers: 6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.538521846636312e-5
allele num: 66326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.777057e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.85e0

FS
type: SiteQuality
SIO_000300: 3.675e0

QD
type: SiteQuality
SIO_000300: 1.498e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
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GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 33
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GenotypeQuality
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GenotypeQuality
all individuals: 2829
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.393e1

VQSLOD
type: SiteQuality
SIO_000300: 7.98e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.003e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

FS
type: SiteQuality
SIO_000300: 2.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.629e0

DP
type: SiteQuality
SIO_000300: 1.784736e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

GenotypeQuality
all individuals: 44793
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 1727
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GenotypeQuality
all individuals: 942
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.510328652614487e-5
allele num: 66514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02124183006536e-4
allele num: 9792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 2.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.629e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

VQSLOD
type: SiteQuality
SIO_000300: 7.98e-1

QD
type: SiteQuality
SIO_000300: 1.393e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.003e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 1.784736e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3