14-75506595-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506595
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506595
    reference: chr 14
allele count: 56
allele frequency: 6.258941344778255e-4
allele num: 89472
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.408+19A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1480A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1480A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1723A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.641+19A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3570+19A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3570+19A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6484A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3570+19A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.260+19A>T
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 31546
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 14710
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-75506599-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506599
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506599
    reference: chr 14
allele count: 1
allele frequency: 9.715529302036375e-6
allele num: 102928
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.641+15T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.408+15T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1484T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.260+15T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3570+15T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6480T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3570+15T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1719T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3570+15T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1484T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8454
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

14-75506605-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506605
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506605
    reference: chr 14
allele count: 6
allele frequency: 5.30766781076395e-5
allele num: 113044
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3570+9T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.408+9T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3570+9T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3570+9T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.260+9T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.641+9T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1490T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6474T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1713T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1490T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

14-75506616-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506616
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506616
    reference: chr 14
allele count: 2
allele frequency: 1.676867611302088e-5
allele num: 119270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3568C>A
  hgvsp: ENSP00000238662.7:p.Gln1190Lys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.639C>A
  hgvsp: ENSP00000451130.1:p.Gln214Lys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3568C>A
  hgvsp: ENSP00000452316.1:p.Gln1190Lys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.406C>A
  hgvsp: ENSP00000370355.2:p.Gln136Lys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1501C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.929C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1501C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1702C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3568C>A
  hgvsp: ENSP00000348020.2:p.Gln1190Lys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.258C>A
  hgvsp: ENSP00000452136.1:p.Gln87Lys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6463C>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln1190Lys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

14-75506619-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506619
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506619
    reference: chr 14
allele count: 2
allele frequency: 1.669337606837607e-5
allele num: 119808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3565A>C
  hgvsp: ENSP00000238662.7:p.Met1189Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.255A>C
  hgvsp: ENSP00000452136.1:p.Met86Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.403A>C
  hgvsp: ENSP00000370355.2:p.Met135Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3565A>C
  hgvsp: ENSP00000452316.1:p.Met1189Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1699A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.636A>C
  hgvsp: ENSP00000451130.1:p.Met213Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1504A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.926A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3565A>C
  hgvsp: ENSP00000348020.2:p.Met1189Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6460A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1504A>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1189Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

14-75506621-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506621
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506621
    reference: chr 14
allele count: 23
allele frequency: 1.915485450638773e-4
allele num: 120074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.253C>G
  hgvsp: ENSP00000452136.1:p.Ser85Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.924C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.401C>G
  hgvsp: ENSP00000370355.2:p.Ser134Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.634C>G
  hgvsp: ENSP00000451130.1:p.Ser212Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1506C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3563C>G
  hgvsp: ENSP00000238662.7:p.Ser1188Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3563C>G
  hgvsp: ENSP00000348020.2:p.Ser1188Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1697C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1506C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3563C>G
  hgvsp: ENSP00000452316.1:p.Ser1188Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6458C>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1188Ter
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

14-75506629-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506629
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506629
    reference: chr 14
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.245G>C
  hgvsp: ENSP00000452136.1:p.Met82Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3555G>C
  hgvsp: ENSP00000348020.2:p.Met1185Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1514G>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3555G>C
  hgvsp: ENSP00000238662.7:p.Met1185Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.393G>C
  hgvsp: ENSP00000370355.2:p.Met131Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3555G>C
  hgvsp: ENSP00000452316.1:p.Met1185Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1689G>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.626G>C
  hgvsp: ENSP00000451130.1:p.Met209Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6450G>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1514G>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.916G>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1185Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

14-75506632-TCCTTTGGTGAAACGATAGGGATACAAGATGTTGTGAATTTTAACTGCTAAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506632
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506581
    reference: chr 14
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50216
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser1167_Gly1184delinsArg
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: TCCTTTGGTGAAACGATAGGGATACAAGATGTTGTGAATTTTAACTGCTAAG
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

14-75506634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506634
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506634
    reference: chr 14
allele count: 1
allele frequency: 8.271298593879239e-6
allele num: 120900
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.911G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3550G>A
  hgvsp: ENSP00000452316.1:p.Gly1184Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3550G>A
  hgvsp: ENSP00000348020.2:p.Gly1184Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1684G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1519G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.621G>A
  hgvsp: ENSP00000451130.1:p.Gly208Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.240G>A
  hgvsp: ENSP00000452136.1:p.Gly81Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.388G>A
  hgvsp: ENSP00000370355.2:p.Gly130Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3550G>A
  hgvsp: ENSP00000238662.7:p.Gly1184Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6445G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1519G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly1184Arg
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD

14-75506636-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506636
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506636
    reference: chr 14
allele count: 1
allele frequency: 8.268426187759421e-6
allele num: 120942
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3548A>G
  hgvsp: ENSP00000238662.7:p.Lys1183Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.238A>G
  hgvsp: ENSP00000452136.1:p.Lys80Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.909A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1521A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6443A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3548A>G
  hgvsp: ENSP00000348020.2:p.Lys1183Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1682A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.386A>G
  hgvsp: ENSP00000370355.2:p.Lys129Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3548A>G
  hgvsp: ENSP00000452316.1:p.Lys1183Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.619A>G
  hgvsp: ENSP00000451130.1:p.Lys207Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1521A>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys1183Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

14-75506645-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506645
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506645
    reference: chr 14
allele count: 11
allele frequency: 9.082202186333763e-5
allele num: 121116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.377G>A
  hgvsp: ENSP00000370355.2:p.Arg126His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.610G>A
  hgvsp: ENSP00000451130.1:p.Arg204His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3539G>A
  hgvsp: ENSP00000238662.7:p.Arg1180His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1530G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3539G>A
  hgvsp: ENSP00000452316.1:p.Arg1180His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1530G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.229G>A
  hgvsp: ENSP00000452136.1:p.Arg77His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.900G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6434G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3539G>A
  hgvsp: ENSP00000348020.2:p.Arg1180His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1673G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg1180His
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

14-75506646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506646
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506646
    reference: chr 14
allele count: 2
allele frequency: 1.651173158529135e-5
allele num: 121126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1672C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1531C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3538C>T
  hgvsp: ENSP00000452316.1:p.Arg1180Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.899C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.228C>T
  hgvsp: ENSP00000452136.1:p.Arg77Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3538C>T
  hgvsp: ENSP00000238662.7:p.Arg1180Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1531C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.609C>T
  hgvsp: ENSP00000451130.1:p.Arg204Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.376C>T
  hgvsp: ENSP00000370355.2:p.Arg126Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6433C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3538C>T
  hgvsp: ENSP00000348020.2:p.Arg1180Cys
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1180Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum

14-75506648-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506648
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506649
    reference: chr 14
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3535dupT
  hgvsp: ENSP00000348020.2:p.Tyr1179LeufsTer19
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1534dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1669dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6430dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.373dupT
  hgvsp: ENSP00000370355.2:p.Tyr125LeufsTer19
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3535dupT
  hgvsp: ENSP00000238662.7:p.Tyr1179LeufsTer19
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1534dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3535dupT
  hgvsp: ENSP00000452316.1:p.Tyr1179LeufsTer19
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.225dupT
  hgvsp: ENSP00000452136.1:p.Tyr76LeufsTer?
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.606dupT
  hgvsp: ENSP00000451130.1:p.Tyr203LeufsTer19
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.896dupT
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr1179LeufsTer19
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-75506651-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506651
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506651
    reference: chr 14
allele count: 3
allele frequency: 2.475778632379884e-5
allele num: 121174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6428C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3533C>T
  hgvsp: ENSP00000238662.7:p.Pro1178Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3533C>T
  hgvsp: ENSP00000452316.1:p.Pro1178Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1667C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.223C>T
  hgvsp: ENSP00000452136.1:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.604C>T
  hgvsp: ENSP00000451130.1:p.Pro202Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.371C>T
  hgvsp: ENSP00000370355.2:p.Pro124Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3533C>T
  hgvsp: ENSP00000348020.2:p.Pro1178Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1536C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.894C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1536C>T
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1178Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/14-75506655-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506655
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506655
    reference: chr 14
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3529T>G
  hgvsp: ENSP00000452316.1:p.Tyr1177Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.219T>G
  hgvsp: ENSP00000452136.1:p.Tyr74Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1540T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1663T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3529T>G
  hgvsp: ENSP00000348020.2:p.Tyr1177Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3529T>G
  hgvsp: ENSP00000238662.7:p.Tyr1177Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.890T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.600T>G
  hgvsp: ENSP00000451130.1:p.Tyr201Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1540T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.367T>G
  hgvsp: ENSP00000370355.2:p.Tyr123Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6424T>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr1177Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

14-75506663-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506663
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506663
    reference: chr 14
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.592A>C
  hgvsp: ENSP00000451130.1:p.Asn198Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.211A>C
  hgvsp: ENSP00000452136.1:p.Asn71Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1548A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1655A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.359A>C
  hgvsp: ENSP00000370355.2:p.Asn120Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1548A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3521A>C
  hgvsp: ENSP00000238662.7:p.Asn1174Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3521A>C
  hgvsp: ENSP00000452316.1:p.Asn1174Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6416A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3521A>C
  hgvsp: ENSP00000348020.2:p.Asn1174Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.882A>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn1174Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

14-75506669-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506669
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506669
    reference: chr 14
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1554T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3515T>A
  hgvsp: ENSP00000238662.7:p.Ile1172Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.353T>A
  hgvsp: ENSP00000370355.2:p.Ile118Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.205T>A
  hgvsp: ENSP00000452136.1:p.Ile69Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1649T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3515T>A
  hgvsp: ENSP00000348020.2:p.Ile1172Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.586T>A
  hgvsp: ENSP00000451130.1:p.Ile196Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6410T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3515T>A
  hgvsp: ENSP00000452316.1:p.Ile1172Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.876T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1554T>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile1172Asn
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

14-75506684-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506684
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506684
    reference: chr 14
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.338G>A
  hgvsp: ENSP00000370355.2:p.Ser113Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.571G>A
  hgvsp: ENSP00000451130.1:p.Ser191Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1569G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3500G>A
  hgvsp: ENSP00000348020.2:p.Ser1167Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.190G>A
  hgvsp: ENSP00000452136.1:p.Ser64Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3500G>A
  hgvsp: ENSP00000238662.7:p.Ser1167Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6395G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3500G>A
  hgvsp: ENSP00000452316.1:p.Ser1167Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.861G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1634G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1569G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1167Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

14-75506687-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506687
    reference: chr 14
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3497A>C
  hgvsp: ENSP00000238662.7:p.Glu1166Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.568A>C
  hgvsp: ENSP00000451130.1:p.Glu190Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.335A>C
  hgvsp: ENSP00000370355.2:p.Glu112Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1572A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3497A>C
  hgvsp: ENSP00000452316.1:p.Glu1166Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.187A>C
  hgvsp: ENSP00000452136.1:p.Glu63Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3497A>C
  hgvsp: ENSP00000348020.2:p.Glu1166Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1572A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1631A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.858A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6392A>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1166Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

14-75506696-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506696
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506696
    reference: chr 14
allele count: 234
allele frequency: 1.933372992266508e-3
allele num: 121032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1581G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3488G>A
  hgvsp: ENSP00000348020.2:p.Gly1163Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.178G>A
  hgvsp: ENSP00000452136.1:p.Gly60Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3488G>A
  hgvsp: ENSP00000452316.1:p.Gly1163Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3488G>A
  hgvsp: ENSP00000238662.7:p.Gly1163Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.326G>A
  hgvsp: ENSP00000370355.2:p.Gly109Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1581G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.559G>A
  hgvsp: ENSP00000451130.1:p.Gly187Asp
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.849G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1622G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6383G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 45838
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
hgvs: p.Gly1163Asp
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

14-75506699-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506699
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506699
    reference: chr 14
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3485G>C
  hgvsp: ENSP00000452316.1:p.Ser1162Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.175G>C
  hgvsp: ENSP00000452136.1:p.Ser59Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.556G>C
  hgvsp: ENSP00000451130.1:p.Ser186Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1584G>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1584G>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.846G>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.323G>C
  hgvsp: ENSP00000370355.2:p.Ser108Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1619G>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3485G>C
  hgvsp: ENSP00000238662.7:p.Ser1162Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3485G>C
  hgvsp: ENSP00000348020.2:p.Ser1162Thr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6380G>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1162Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-75506709-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506709
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506709
    reference: chr 14
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3475G>T
  hgvsp: ENSP00000452316.1:p.Asp1159Tyr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3475G>T
  hgvsp: ENSP00000238662.7:p.Asp1159Tyr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.313G>T
  hgvsp: ENSP00000370355.2:p.Asp105Tyr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1609G>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.452-1594G>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.451-1594G>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.165G>T
  hgvsp: ENSP00000452136.1:p.Asp56Tyr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.546G>T
  hgvsp: ENSP00000451130.1:p.Asp183Tyr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3475G>T
  hgvsp: ENSP00000348020.2:p.Asp1159Tyr
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.836G>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6370G>T
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7452
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp1159Tyr
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

14-75506718-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506718
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506718
    reference: chr 14
allele count: 13
allele frequency: 1.082233063052563e-4
allele num: 120122
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1600G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.537G>A
  hgvsp: ENSP00000451130.1:p.Val180Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+1600G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+1600G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3466G>A
  hgvsp: ENSP00000238662.7:p.Val1156Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.156G>A
  hgvsp: ENSP00000452136.1:p.Val53Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.304G>A
  hgvsp: ENSP00000370355.2:p.Val102Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3466G>A
  hgvsp: ENSP00000348020.2:p.Val1156Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6361G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3466G>A
  hgvsp: ENSP00000452316.1:p.Val1156Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44411
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7450
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val1156Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

14-75506743-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506743
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506743
    reference: chr 14
allele count: 30
allele frequency: 2.589376650727615e-4
allele num: 115858
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.304-25A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3466-25A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3466-25A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-25A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6336A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1575A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.537-25A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+1575A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3466-25A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+1575A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.156-25A>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8764
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6628
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36090
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

14-75506745-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506745
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506745
    reference: chr 14
allele count: 1
allele frequency: 8.664009703690868e-6
allele num: 115420
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6334C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+1573C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3466-27C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.156-27C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3466-27C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.304-27C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-27C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+1573C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1573C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.537-27C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3466-27C>T
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-75506760-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75506760
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75506760
    reference: chr 14
allele count: 4
allele frequency: 3.557073240138014e-5
allele num: 112452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+1558C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.537-42C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+1558C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3466-42C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+6319C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3466-42C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.156-42C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+1558C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.304-42C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3466-42C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-42C>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15904
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3514
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

14-75508268-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508268
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508268
    reference: chr 14
allele count: 18
allele frequency: 1.659139091160476e-4
allele num: 108490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1550C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+50C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+50C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+50C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+50C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+50C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4811C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+50C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+50C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+50C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+50C>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11628
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12315
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-75508270-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508270
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508270
    reference: chr 14
allele count: 2
allele frequency: 1.729654933840699e-5
allele num: 115630
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+48T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+48T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+48T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+48T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+48T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4809T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1552T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+48T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+48T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+48T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+48T>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10356
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11040
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5153
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

14-75508271-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508271
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508271
    reference: chr 14
allele count: 8
allele frequency: 6.926167059149467e-5
allele num: 115504
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+47C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4808C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+47C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+47C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+47C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+47C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+47C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+47C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1553C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+47C>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+47C>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10686
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1870
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-75508276-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508276
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508276
    reference: chr 14
allele count: 5
allele frequency: 4.311906034943687e-5
allele num: 115958
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+42T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+42T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+42T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+42T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1558T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+42T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+42T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4803T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+42T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+42T>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+42T>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13098
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

14-75508277-GAAGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508277
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508273
    reference: chr 14
allele count: 7
allele frequency: 6.0643864573587e-5
allele num: 115428
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1563_827-1560delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+37_536+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+37_155+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+37_198+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+37_303+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+37_451+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+37_3465+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+37_3465+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4798_3280+4801delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+37_450+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+37_3465+40delTCTT
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 13305
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6388
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12528
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: GAAGA
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-75508279-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508279
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508278
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 113828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+38delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+38delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+38delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+38delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+38delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+38delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4799delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+38delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1562delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+38delC
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+38delC
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: AG
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

14-75508280-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508280
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508280
    reference: chr 14
allele count: 4
allele frequency: 6.474168069403081e-5
allele num: 61784
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2815
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3230
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3929
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20251
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4269
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2884
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2004
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2833
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4711
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 4
  allele frequency: 1.197604790419162e-4
  allele num: 33400
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7570
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4004
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7208
  num of homozygotes: 0
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

14-75508280-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508280
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508281
    reference: chr 14
allele count: 711
allele frequency: 1.150783374336398e-2
allele num: 61784
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+37dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+37dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+37dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+37dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+37dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1563dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+37dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+37dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4798dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+37dupT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+37dupT
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 2.75e1
  variant carriers: 365
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 1.75e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 3.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 9.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.25e1
  variant carriers: 12
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum

14-75508280-G-GAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508280
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508282
    reference: chr 14
allele count: 28
allele frequency: 4.531917648582157e-4
allele num: 61784
alternate allele: GAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+36_303+37dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1564_827-1563dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+36_155+37dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+36_198+37dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+36_536+37dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+36_3465+37dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+36_450+37dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4797_3280+4798dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+36_3465+37dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+36_451+37dupTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+36_3465+37dupTT
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

14-75508280-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508280
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508279
    reference: chr 14
allele count: 5211
allele frequency: 8.434222452414865e-2
allele num: 61784
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+37delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+37delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4798delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+37delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+37delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+37delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+37delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+37delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1563delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+37delT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+37delT
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 3.75e1
  variant carriers: 616
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 1.75e1
  variant carriers: 679
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 2.75e1
  variant carriers: 1582
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 1347
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 7.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 4.25e1
  variant carriers: 330
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 878
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.25e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 4.75e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 9.75e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 4269
  bin: 9.75e1
  variant carriers: 2498
num of homozygotes: 304
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: GA
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

14-75508280-GAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508280
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508278
    reference: chr 14
allele count: 1
allele frequency: 1.61854201735077e-5
allele num: 61784
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+36_450+37delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+36_3465+37delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+36_536+37delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4797_3280+4798delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1564_827-1563delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+36_155+37delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+36_198+37delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+36_303+37delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+36_3465+37delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+36_3465+37delTT
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+36_451+37delTT
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: GAA
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

14-75508281-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508281
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508281
    reference: chr 14
allele count: 2
allele frequency: 3.875067813686739e-5
allele num: 51612
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1563T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+37T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+37T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+37T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4798T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+37T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+37T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+37T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+37T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+37T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+37T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

14-75508282-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508282
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508282
    reference: chr 14
allele count: 2
allele frequency: 2.3657999952684e-5
allele num: 84538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4797T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+36T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1564T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4685
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS

14-75508283-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508283
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508283
    reference: chr 14
allele count: 10
allele frequency: 8.419351036422112e-5
allele num: 118774
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+35T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4796T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1565T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+35T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+35T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+35T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+35T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+35T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+35T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+35T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+35T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9269
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17835
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8654
  bin: 9.75e1
  variant carriers: 10
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

14-75508285-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508285
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508285
    reference: chr 14
allele count: 1
allele frequency: 8.384197464618687e-6
allele num: 119272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+33T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+33T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4794T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+33T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+33T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1567T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+33T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+33T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+33T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+33T>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+33T>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

14-75508304-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508304
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508304
    reference: chr 14
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4775A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+14A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+14A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+14A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+14A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+14A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+14A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+14A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+14A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1586A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+14A>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20132
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

14-75508304-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508304
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508304
    reference: chr 14
allele count: 3
allele frequency: 2.477536997885835e-5
allele num: 121088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465+14A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198+14A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536+14A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465+14A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465+14A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450+14A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451+14A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4775A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303+14A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1586A>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155+14A>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3166
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

14-75508318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508318
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508318
    reference: chr 14
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.198G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.303G>A
  hgvsp: ENST00000380968.2:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.450G>A
  hgvsp: ENST00000544985.1:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3465G>A
  hgvsp: ENST00000556740.1:c.3465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3465G>A
  hgvsp: ENST00000238662.7:c.3465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.451G>A
  hgvsp: ENST00000555144.1:c.451G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3465G>A
  hgvsp: ENST00000355774.2:c.3465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.155G>A
  hgvsp: ENST00000556453.1:c.155G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.536G>A
  hgvsp: ENST00000553713.1:c.536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4761G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1600G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.3465G>A
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

14-75508322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508322
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508322
    reference: chr 14
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.447C>T
  hgvsp: ENSP00000450647.1:p.Pro150Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3461C>T
  hgvsp: ENSP00000348020.2:p.Pro1154Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.299C>T
  hgvsp: ENSP00000370355.2:p.Pro100Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1604C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.446C>T
  hgvsp: ENSP00000441371.1:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3461C>T
  hgvsp: ENSP00000452316.1:p.Pro1154Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3461C>T
  hgvsp: ENSP00000238662.7:p.Pro1154Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.532C>T
  hgvsp: ENSP00000451130.1:p.Pro178Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4757C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.151C>T
  hgvsp: ENSP00000452136.1:p.Pro51Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.194C>T
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1154Leu
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

14-75508323-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508323
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508323
    reference: chr 14
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3460C>T
  hgvsp: ENSP00000238662.7:p.Pro1154Ser
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.446C>T
  hgvsp: ENSP00000450647.1:p.Pro150Ser
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.445C>T
  hgvsp: ENSP00000441371.1:p.Pro149Ser
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1605C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.531C>T
  hgvsp: ENSP00000451130.1:p.Pro178Ser
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.150C>T
  hgvsp: ENSP00000452136.1:p.Pro51Ser
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3460C>T
  hgvsp: ENSP00000452316.1:p.Pro1154Ser
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4756C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.193C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3460C>T
  hgvsp: ENSP00000348020.2:p.Pro1154Ser
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.298C>T
  hgvsp: ENSP00000370355.2:p.Pro100Ser
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9600
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15978
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1154Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

14-75508328-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508328
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508328
    reference: chr 14
allele count: 8
allele frequency: 6.592066448029797e-5
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1610G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3455G>A
  hgvsp: ENSP00000238662.7:p.Arg1152His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3455G>A
  hgvsp: ENSP00000452316.1:p.Arg1152His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.188G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.145G>A
  hgvsp: ENSP00000452136.1:p.Arg49His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.440G>A
  hgvsp: ENSP00000441371.1:p.Arg147His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3455G>A
  hgvsp: ENSP00000348020.2:p.Arg1152His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.441G>A
  hgvsp: ENSP00000450647.1:p.Arg148His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4751G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.526G>A
  hgvsp: ENSP00000451130.1:p.Arg176His
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.293G>A
  hgvsp: ENSP00000370355.2:p.Arg98His
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1152His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

14-75508329-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508329
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508329
    reference: chr 14
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.525C>T
  hgvsp: ENSP00000451130.1:p.Arg176Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3454C>T
  hgvsp: ENSP00000348020.2:p.Arg1152Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.439C>T
  hgvsp: ENSP00000441371.1:p.Arg147Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.292C>T
  hgvsp: ENSP00000370355.2:p.Arg98Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.144C>T
  hgvsp: ENSP00000452136.1:p.Arg49Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.187C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4750C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1611C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3454C>T
  hgvsp: ENSP00000452316.1:p.Arg1152Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3454C>T
  hgvsp: ENSP00000238662.7:p.Arg1152Cys
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.440C>T
  hgvsp: ENSP00000450647.1:p.Arg148Cys
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1152Cys
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ

14-75508343-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508343
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508343
    reference: chr 14
allele count: 53
allele frequency: 4.366596361718956e-4
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.130A>T
  hgvsp: ENSP00000452136.1:p.Asn44Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1625A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3440A>T
  hgvsp: ENSP00000348020.2:p.Asn1147Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.426A>T
  hgvsp: ENSP00000450647.1:p.Asn143Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.425A>T
  hgvsp: ENSP00000441371.1:p.Asn142Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3440A>T
  hgvsp: ENSP00000238662.7:p.Asn1147Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3440A>T
  hgvsp: ENSP00000452316.1:p.Asn1147Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.511A>T
  hgvsp: ENSP00000451130.1:p.Asn171Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4736A>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.278A>T
  hgvsp: ENSP00000370355.2:p.Asn93Ile
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.173A>T
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15932
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Asn1147Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-75508345-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508345
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508345
    reference: chr 14
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.128C>G
  hgvsp: ENSP00000452136.1:p.Asp43Glu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.276C>G
  hgvsp: ENSP00000370355.2:p.Asp92Glu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.424C>G
  hgvsp: ENSP00000450647.1:p.Asp142Glu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4734C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.171C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3438C>G
  hgvsp: ENSP00000348020.2:p.Asp1146Glu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1627C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.509C>G
  hgvsp: ENSP00000451130.1:p.Asp170Glu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3438C>G
  hgvsp: ENSP00000452316.1:p.Asp1146Glu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.423C>G
  hgvsp: ENSP00000441371.1:p.Asp141Glu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3438C>G
  hgvsp: ENSP00000238662.7:p.Asp1146Glu
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp1146Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

14-75508348-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508348
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508348
    reference: chr 14
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3435G>A
  hgvsp: ENSP00000348020.2:p.Trp1145Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.420G>A
  hgvsp: ENSP00000441371.1:p.Trp140Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.506G>A
  hgvsp: ENSP00000451130.1:p.Trp169Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3435G>A
  hgvsp: ENSP00000238662.7:p.Trp1145Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.168G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1630G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3435G>A
  hgvsp: ENSP00000452316.1:p.Trp1145Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.273G>A
  hgvsp: ENSP00000370355.2:p.Trp91Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.125G>A
  hgvsp: ENSP00000452136.1:p.Trp42Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.421G>A
  hgvsp: ENSP00000450647.1:p.Trp141Ter
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4731G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp1145Ter
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

14-75508350-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508350
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508350
    reference: chr 14
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3433T>C
  hgvsp: ENSP00000348020.2:p.Trp1145Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.166T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1632T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.418T>C
  hgvsp: ENSP00000441371.1:p.Trp140Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3433T>C
  hgvsp: ENSP00000452316.1:p.Trp1145Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4729T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3433T>C
  hgvsp: ENSP00000238662.7:p.Trp1145Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.419T>C
  hgvsp: ENSP00000450647.1:p.Trp141Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.123T>C
  hgvsp: ENSP00000452136.1:p.Trp42Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.504T>C
  hgvsp: ENSP00000451130.1:p.Trp169Arg
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.271T>C
  hgvsp: ENSP00000370355.2:p.Trp91Arg
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp1145Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

14-75508371-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508371
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508371
    reference: chr 14
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1653C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.102C>G
  hgvsp: ENSP00000452136.1:p.Leu35Val
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3412C>G
  hgvsp: ENSP00000348020.2:p.Leu1138Val
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.250C>G
  hgvsp: ENSP00000370355.2:p.Leu84Val
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.397C>G
  hgvsp: ENSP00000441371.1:p.Leu133Val
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4708C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3412C>G
  hgvsp: ENSP00000238662.7:p.Leu1138Val
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.145C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3412C>G
  hgvsp: ENSP00000452316.1:p.Leu1138Val
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.398C>G
  hgvsp: ENSP00000450647.1:p.Leu134Val
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.483C>G
  hgvsp: ENSP00000451130.1:p.Leu162Val
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu1138Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/14-75508372-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508372
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508372
    reference: chr 14
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.144G>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.482G>T
  hgvsp: ENST00000553713.1:c.482G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.101G>T
  hgvsp: ENST00000556453.1:c.101G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.396G>T
  hgvsp: ENST00000544985.1:c.396G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4707G>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3411G>T
  hgvsp: ENST00000556740.1:c.3411G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3411G>T
  hgvsp: ENST00000355774.2:c.3411G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.249G>T
  hgvsp: ENST00000380968.2:c.249G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3411G>T
  hgvsp: ENST00000238662.7:c.3411G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.397G>T
  hgvsp: ENST00000555144.1:c.397G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1654G>T
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9613
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1137Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

14-75508372-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508372
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508372
    reference: chr 14
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.396G>A
  hgvsp: ENST00000544985.1:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.144G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3411G>A
  hgvsp: ENST00000556740.1:c.3411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.482G>A
  hgvsp: ENST00000553713.1:c.482G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.397G>A
  hgvsp: ENST00000555144.1:c.397G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.249G>A
  hgvsp: ENST00000380968.2:c.249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.101G>A
  hgvsp: ENST00000556453.1:c.101G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3411G>A
  hgvsp: ENST00000238662.7:c.3411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3411G>A
  hgvsp: ENST00000355774.2:c.3411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1654G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4707G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1137Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

14-75508373-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508373
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508373
    reference: chr 14
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.100C>T
  hgvsp: ENSP00000452136.1:p.Ser34Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3410C>T
  hgvsp: ENSP00000348020.2:p.Ser1137Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.395C>T
  hgvsp: ENSP00000441371.1:p.Ser132Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1655C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.396C>T
  hgvsp: ENSP00000450647.1:p.Ser133Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3410C>T
  hgvsp: ENSP00000238662.7:p.Ser1137Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.248C>T
  hgvsp: ENSP00000370355.2:p.Ser83Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.143C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.481C>T
  hgvsp: ENSP00000451130.1:p.Ser161Leu
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4706C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3410C>T
  hgvsp: ENSP00000452316.1:p.Ser1137Leu
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1137Leu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

14-75508378-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508378
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508378
    reference: chr 14
allele count: 3
allele frequency: 2.472350876036327e-5
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.95C>T
  hgvsp: ENST00000556453.1:c.95C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.138C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.476C>T
  hgvsp: ENST00000553713.1:c.476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.243C>T
  hgvsp: ENST00000380968.2:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1660C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.390C>T
  hgvsp: ENST00000544985.1:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3405C>T
  hgvsp: ENST00000355774.2:c.3405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3405C>T
  hgvsp: ENST00000556740.1:c.3405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3405C>T
  hgvsp: ENST00000238662.7:c.3405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4701C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.391C>T
  hgvsp: ENST00000555144.1:c.391C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1135Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

14-75508390-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508390
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508390
    reference: chr 14
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.464T>C
  hgvsp: ENST00000553713.1:c.464T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3393T>C
  hgvsp: ENST00000355774.2:c.3393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.83T>C
  hgvsp: ENST00000556453.1:c.83T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4689T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3393T>C
  hgvsp: ENST00000238662.7:c.3393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.126T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.378T>C
  hgvsp: ENST00000544985.1:c.378T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3393T>C
  hgvsp: ENST00000556740.1:c.3393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.231T>C
  hgvsp: ENST00000380968.2:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.379T>C
  hgvsp: ENST00000555144.1:c.379T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1672T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp1131Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

14-75508395-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508395
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508395
    reference: chr 14
allele count: 2
allele frequency: 1.649402916144356e-5
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.459G>A
  hgvsp: ENSP00000451130.1:p.Asp154Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.373G>A
  hgvsp: ENSP00000441371.1:p.Asp125Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4684G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.226G>A
  hgvsp: ENSP00000370355.2:p.Asp76Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.121G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1677G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.78G>A
  hgvsp: ENSP00000452136.1:p.Asp27Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3388G>A
  hgvsp: ENSP00000452316.1:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.374G>A
  hgvsp: ENSP00000450647.1:p.Asp126Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3388G>A
  hgvsp: ENSP00000238662.7:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3388G>A
  hgvsp: ENSP00000348020.2:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20532
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp1130Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

14-75508397-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508397
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508397
    reference: chr 14
allele count: 9
allele frequency: 7.423904974016333e-5
allele num: 121230
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.224T>C
  hgvsp: ENSP00000370355.2:p.Val75Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.457T>C
  hgvsp: ENSP00000451130.1:p.Val153Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.119T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3386T>C
  hgvsp: ENSP00000348020.2:p.Val1129Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3386T>C
  hgvsp: ENSP00000238662.7:p.Val1129Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4682T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.76T>C
  hgvsp: ENSP00000452136.1:p.Val26Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.371T>C
  hgvsp: ENSP00000441371.1:p.Val124Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3386T>C
  hgvsp: ENSP00000452316.1:p.Val1129Ala
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1679T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.372T>C
  hgvsp: ENSP00000450647.1:p.Val125Ala
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15502
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val1129Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

14-75508399-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508399
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508399
    reference: chr 14
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.222T>C
  hgvsp: ENST00000380968.2:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3384T>C
  hgvsp: ENST00000238662.7:c.3384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.74T>C
  hgvsp: ENST00000556453.1:c.74T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.369T>C
  hgvsp: ENST00000544985.1:c.369T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3384T>C
  hgvsp: ENST00000556740.1:c.3384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.455T>C
  hgvsp: ENST00000553713.1:c.455T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.117T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3384T>C
  hgvsp: ENST00000355774.2:c.3384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.370T>C
  hgvsp: ENST00000555144.1:c.370T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1681T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4680T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr1128Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

14-75508425-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508425
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508425
    reference: chr 14
allele count: 1
allele frequency: 8.278693953241936e-6
allele num: 120792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4654T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3380-22T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.70-22T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.451-22T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.218-22T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3380-22T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1707T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.113-22T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.366-22T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.365-22T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3380-22T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9176
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8479
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

14-75508439-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508439
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508439
    reference: chr 14
allele count: 4
allele frequency: 3.323528923010452e-5
allele num: 120354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.366-36C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.113-36C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3380-36C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.451-36C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1721C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.365-36C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3380-36C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.218-36C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4640C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.70-36C>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3380-36C>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

14-75508445-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75508445
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75508445
    reference: chr 14
allele count: 1
allele frequency: 8.324176738920521e-6
allele num: 120132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.451-42G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.113-42G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.366-42G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-1727G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3380-42G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.70-42G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.365-42G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4634G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3380-42G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3380-42G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.218-42G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10098
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

14-75509033-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75509033
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75509033
    reference: chr 14
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.70-630T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.112+49T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4046T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3379+49T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.451-630T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.364+49T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.365+49T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.217+49T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3379+49T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3379+49T>C
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-2315T>C
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-75509039-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75509039
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75509039
    reference: chr 14
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.217+43A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.451-636A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3379+43A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.70-636A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.364+43A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3379+43A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-2321A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3379+43A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.365+43A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.112+43A>G
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4040A>G
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

14-75509041-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75509041
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75509041
    reference: chr 14
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4038G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3379+41G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.70-638G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.451-638G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.364+41G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.365+41G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3379+41G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3379+41G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.112+41G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-2323G>A
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.217+41G>A
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2813
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

14-75509042-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75509042
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 75509042
    reference: chr 14
allele count: 27
allele frequency: 2.22401607881254e-4
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000441371
  ensembl transcript: ENST00000544985
  gene symbol: MLH3
  hgvsc: ENST00000544985.1:c.364+40C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000348020
  ensembl transcript: ENST00000355774
  gene symbol: MLH3
  hgvsc: ENST00000355774.2:c.3379+40C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452136
  ensembl transcript: ENST00000556453
  gene symbol: MLH3
  hgvsc: ENST00000556453.1:c.70-639C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555671
  gene symbol: MLH3
  hgvsc: ENST00000555671.1:n.827-2324C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000238662
  ensembl transcript: ENST00000238662
  gene symbol: MLH3
  hgvsc: ENST00000238662.7:c.3379+40C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl transcript: ENST00000555499
  gene symbol: MLH3
  hgvsc: ENST00000555499.1:n.112+40C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000370355
  ensembl transcript: ENST00000380968
  gene symbol: MLH3
  hgvsc: ENST00000380968.2:c.217+40C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000450647
  ensembl transcript: ENST00000555144
  gene symbol: MLH3
  hgvsc: ENST00000555144.1:c.365+40C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451130
  ensembl transcript: ENST00000553713
  gene symbol: MLH3
  hgvsc: ENST00000553713.1:c.451-639C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000452316
  ensembl transcript: ENST00000556740
  gene symbol: MLH3
  hgvsc: ENST00000556740.1:c.3379+40C>T
  variant of: http://identifiers.org/hgnc/7128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119684
  ensembl protein: ENSP00000451540
  ensembl transcript: ENST00000556257
  gene symbol: MLH3
  hgvsc: ENST00000556257.1:c.3280+4037C>T
  variant of: http://identifiers.org/hgnc/7128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17878
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 4061
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 798
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 684
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 335
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 589
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 1312
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 1441
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 417
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 231
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1049
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31751
bin: 6.25e1
variant carriers: 2

South Asian
type: Population
allele count: 30
allele frequency: 2.401921537229784e-3
allele num: 12490
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 7.568876778686043e-4
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.633802816901409e-4
allele num: 7100
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.085069444444444e-4
allele num: 9216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 3.341408403642135e-4
allele num: 47884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.805e1

VQSLOD
type: SiteQuality
SIO_000300: -4.748e0

FS
type: SiteQuality
SIO_000300: 4.284e0

QD
type: SiteQuality
SIO_000300: 3.63e0

MQRankSum
type: SiteQuality
SIO_000300: -2.339e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.92e-1

DP
type: SiteQuality
SIO_000300: 1.195195e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.111e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
all individuals: 206
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 231
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.798561151079137e-5
allele num: 55600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

QD
type: SiteQuality
SIO_000300: 1.598e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.766e1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.306715e6

VQSLOD
type: SiteQuality
SIO_000300: -1.857e0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3915
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4598
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.852080123266564e-4
allele num: 15576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

QD
type: SiteQuality
SIO_000300: 1.411e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.9e-2

FS
type: SiteQuality
SIO_000300: 9.632e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.499e0

MQ
type: SiteQuality
SIO_000300: 5.848e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.386875e6

GenotypeDepth
all individuals: 2619
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49249
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4788
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.22040517451794e-4
allele num: 16388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65482
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.107e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.99e-1

MQ
type: SiteQuality
SIO_000300: 5.825e1

FS
type: SiteQuality
SIO_000300: 9.09e-1

QD
type: SiteQuality
SIO_000300: 1.059e1

DP
type: SiteQuality
SIO_000300: 1.441451e6

GenotypeDepth
all individuals: 126
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4846
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49654
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.979805979014057e-4
allele num: 10102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.704e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 9.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: -2.711e-1

DP
type: SiteQuality
SIO_000300: 1.445628e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.79e0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 23

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.519295047098146e-3
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
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allele count: 12
allele frequency: 1.819008640291041e-4
allele num: 65970
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQ
type: SiteQuality
SIO_000300: 5.863e1

ClippingRankSum
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SIO_000300: -4.5e-1

BaseQRankSum
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SIO_000300: -1.395e0

DP
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SIO_000300: 1.44948e6

QD
type: SiteQuality
SIO_000300: 1.521e1

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeDepth
all individuals: 16
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4883
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506886471173262e-5
allele num: 66362
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 7.78e0

ClippingRankSum
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SIO_000300: -9.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 7.51e-1

DP
type: SiteQuality
SIO_000300: 1.454357e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
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SIO_000300: -1.406e0

QD
type: SiteQuality
SIO_000300: 2.2e-1

ClippingRankSum
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SIO_000300: 7.37e-1

DP
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MQRankSum
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SIO_000300: -5.366e0

ReadPosRankSum
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SIO_000300: 2.02e0

FS
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SIO_000300: 5.646e0

MQ
type: SiteQuality
SIO_000300: 5.576e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.29e-1

ClippingRankSum
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SIO_000300: 2.26e0

BaseQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.456388e6

FS
type: SiteQuality
SIO_000300: 2.915e0

QD
type: SiteQuality
SIO_000300: 1.435e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.710623422023694e-5
allele num: 10298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.635e0

QD
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BaseQRankSum
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SIO_000300: 3.96e0

VQSLOD
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InbreedingCoeff
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MQRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.458e0

MQ
type: SiteQuality
SIO_000300: 5.327e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.051051051051051e-4
allele num: 66600
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

Other
type: Population
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VQSLOD
type: SiteQuality
SIO_000300: 8.95e-1

DP
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QD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.9e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4926
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002912825440678e-5
allele num: 66602
num of homozygotes: 0

South Asian
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allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

MQ
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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QD
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FS
type: SiteQuality
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MQRankSum
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SIO_000300: 4.0e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

FS
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DP
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SIO_000300: 1.459392e6

ClippingRankSum
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SIO_000300: 1.03e0

MQRankSum
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SIO_000300: 1.19e0

BaseQRankSum
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SIO_000300: 2.96e-1

ReadPosRankSum
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SIO_000300: 1.02e0

GenotypeDepth
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.502611514678514e-5
allele num: 66628
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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SIO_000300: -6.6e-1

FS
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SIO_000300: 5.04e-1

QD
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DP
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SIO_000300: 1.459987e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

DP
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SIO_000300: 1.45991e6

BaseQRankSum
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MQRankSum
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SIO_000300: -6.929999999999999e-1

FS
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InbreedingCoeff
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VQSLOD
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MQ
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SIO_000300: 5.94e1

ReadPosRankSum
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SIO_000300: 1.03e0

QD
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ClippingRankSum
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SIO_000300: -5.600000000000001e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.654373431164318e-5
allele num: 10358
num of homozygotes: 0

Other
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ClippingRankSum
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SIO_000300: -1.716e0

InbreedingCoeff
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QD
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DP
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MQ
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SIO_000300: 5.888e1

BaseQRankSum
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ReadPosRankSum
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SIO_000300: 8.3e-2

MQRankSum
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FS
type: SiteQuality
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VQSLOD
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SIO_000300: -1.7e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

East Asian
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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FS
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SIO_000300: 3.281e0

ReadPosRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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DP
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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Other
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BaseQRankSum
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ReadPosRankSum
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FS
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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African
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South Asian
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Other
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European (Finnish)
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MQ
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ClippingRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66536
num of homozygotes: 0

East Asian
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allele frequency: 2.552204176334107e-2
allele num: 8620
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.460806367883717e-4
allele num: 11558
num of homozygotes: 0

African
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allele frequency: 5.812826971517147e-4
allele num: 10322
num of homozygotes: 0

ClippingRankSum
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SIO_000300: -2.7e-1

ReadPosRankSum
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SIO_000300: 8.46e-1

InbreedingCoeff
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SIO_000300: 4.3e-3

FS
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SIO_000300: 1.167e0

MQRankSum
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SIO_000300: 5.38e-1

VQSLOD
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BaseQRankSum
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SIO_000300: -1.66e0

DP
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SIO_000300: 1.469122e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.099e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.697439875872769e-5
allele num: 10312
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.458998e6

ClippingRankSum
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MQ
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SIO_000300: 5.945e1

FS
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QD
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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SIO_000300: 6.31e-1

MQRankSum
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ReadPosRankSum
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SIO_000300: -4.87e-1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8590
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.455142e6

MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.0e-4

FS
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ReadPosRankSum
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QD
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MQRankSum
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SIO_000300: -5.27e-1

ClippingRankSum
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SIO_000300: 9.15e-1

VQSLOD
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SIO_000300: -1.875e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.08e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 13
allele frequency: 1.969100272644653e-4
allele num: 66020
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.051e1

DP
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SIO_000300: 1.447001e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

BaseQRankSum
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SIO_000300: -1.632e0

FS
type: SiteQuality
SIO_000300: 6.64e-1

MQ
type: SiteQuality
SIO_000300: 5.898e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.285947763774083e-5
allele num: 63634
num of homozygotes: 0

African
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allele count: 3
allele frequency: 3.174603174603175e-4
allele num: 9450
num of homozygotes: 0

East Asian
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allele count: 14
allele frequency: 1.701920739119864e-3
allele num: 8226
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.868393047179851e-5
allele num: 11276
num of homozygotes: 0

South Asian
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allele count: 8
allele frequency: 5.032712632108706e-4
allele num: 15896
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DP
type: SiteQuality
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MQ
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ClippingRankSum
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SIO_000300: -1.13e-1

FS
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QD
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SIO_000300: 1.567e1

ReadPosRankSum
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -7.0e-4

BaseQRankSum
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15836
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6498
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Other
type: Population
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allele frequency: 0.0e0
allele num: 870
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577884372633173e-5
allele num: 63376
num of homozygotes: 0

Latino
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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DP
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MQ
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QD
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9088
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61574
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European (Finnish)
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South Asian
type: Population
allele count: 4
allele frequency: 2.57864878803507e-4
allele num: 15512
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Latino
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Other
type: Population
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MQ
type: SiteQuality
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QD
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 838
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South Asian
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African
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allele frequency: 3.663003663003663e-4
allele num: 8190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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allele count: 14
allele frequency: 2.309545019631133e-4
allele num: 60618
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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QD
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FS
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DP
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.277e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2684
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63656
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.147305132059266e-4
allele num: 9314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.037e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

QD
type: SiteQuality
SIO_000300: 1.163e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

DP
type: SiteQuality
SIO_000300: 2.015256e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8747
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variant carriers: 7

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.945598417408506e-4
allele num: 16176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

MQRankSum
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SIO_000300: 1.44e-1

VQSLOD
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.225e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.125e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.823991487497262e-5
allele num: 63906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.504e1

DP
type: SiteQuality
SIO_000300: 2.057492e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.819e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 1.2374e1

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 17605
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variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 5.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.193944712593243e-4
allele num: 9116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.257545271629779e-4
allele num: 7952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.279040562602035e-5
allele num: 63704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

QD
type: SiteQuality
SIO_000300: 5.0e-2

FS
type: SiteQuality
SIO_000300: 1.279e0

DP
type: SiteQuality
SIO_000300: 2.0666e6

MQ
type: SiteQuality
SIO_000300: 5.996e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.897e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 912
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.398e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

QD
type: SiteQuality
SIO_000300: 2.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.095e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.17e-1

DP
type: SiteQuality
SIO_000300: 2.081198e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.984e1

QD
type: SiteQuality
SIO_000300: 5.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.339e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

FS
type: SiteQuality
SIO_000300: 9.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

DP
type: SiteQuality
SIO_000300: 2.438086e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-2

GenotypeQuality
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bin: 3.75e1
variant carriers: 82

GenotypeQuality
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bin: 1.75e1
variant carriers: 159

GenotypeQuality
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bin: 7.75e1
variant carriers: 7

GenotypeQuality
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bin: 2.25e1
variant carriers: 156

GenotypeQuality
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GenotypeQuality
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variant carriers: 18

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 2004
bin: 4.25e1
variant carriers: 64

GenotypeQuality
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bin: 1.25e1
variant carriers: 156

GenotypeQuality
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bin: 3.25e1
variant carriers: 77

GenotypeQuality
all individuals: 828
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 2884
bin: 2.75e1
variant carriers: 119

GenotypeQuality
all individuals: 1108
bin: 5.75e1
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GenotypeQuality
all individuals: 4269
bin: 9.75e1
variant carriers: 28

South Asian
type: Population
allele count: 112
allele frequency: 1.553829078801332e-2
allele num: 7208
num of homozygotes: 0

East Asian
type: Population
allele count: 51
allele frequency: 1.304347826086956e-2
allele num: 3910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 2.747252747252747e-3
allele num: 4004
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 1.568627450980392e-2
allele num: 510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 411
allele frequency: 1.230538922155689e-2
allele num: 33400
num of homozygotes: 0

African
type: Population
allele count: 27
allele frequency: 3.566710700132101e-3
allele num: 7570
num of homozygotes: 0

Latino
type: Population
allele count: 91
allele frequency: 1.756078734079506e-2
allele num: 5182
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.339e-1

DP
type: SiteQuality
SIO_000300: 2.438086e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

BaseQRankSum
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SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.24e0

FS
type: SiteQuality
SIO_000300: 9.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 761
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 550
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GenotypeQuality
all individuals: 1369
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 7.492507492507493e-4
allele num: 4004
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 7.485029940119761e-4
allele num: 33400
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-2

FS
type: SiteQuality
SIO_000300: 9.69e-1

DP
type: SiteQuality
SIO_000300: 2.438086e6

QD
type: SiteQuality
SIO_000300: 5.24e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.339e-1

BaseQRankSum
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
all individuals: 3230
bin: 7.5e0
variant carriers: 434

GenotypeQuality
all individuals: 4711
bin: 6.25e1
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GenotypeQuality
all individuals: 20251
bin: 2.5e0
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GenotypeQuality
all individuals: 1108
bin: 5.75e1
variant carriers: 113

GenotypeQuality
all individuals: 2004
bin: 4.25e1
variant carriers: 204

GenotypeQuality
all individuals: 377
bin: 8.75e1
variant carriers: 71

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 51

GenotypeQuality
all individuals: 761
bin: 7.75e1
variant carriers: 73

GenotypeQuality
all individuals: 1369
bin: 5.25e1
variant carriers: 161

GenotypeQuality
all individuals: 2833
bin: 1.25e1
variant carriers: 405

GenotypeQuality
all individuals: 2815
bin: 3.25e1
variant carriers: 286

GenotypeQuality
all individuals: 2707
bin: 1.75e1
variant carriers: 414

GenotypeQuality
all individuals: 3929
bin: 2.25e1
variant carriers: 439

GenotypeQuality
all individuals: 2884
bin: 2.75e1
variant carriers: 318

GenotypeQuality
all individuals: 1711
bin: 4.75e1
variant carriers: 184

GenotypeQuality
all individuals: 1502
bin: 6.75e1
variant carriers: 92

GenotypeQuality
all individuals: 2473
bin: 3.75e1
variant carriers: 220

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 75

GenotypeQuality
all individuals: 356
bin: 9.25e1
variant carriers: 42

Other
type: Population
allele count: 21
allele frequency: 4.117647058823529e-2
allele num: 510
num of homozygotes: 1

South Asian
type: Population
allele count: 228
allele frequency: 3.16315205327414e-2
allele num: 7208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1630
allele frequency: 4.880239520958084e-2
allele num: 33400
num of homozygotes: 0

Latino
type: Population
allele count: 350
allele frequency: 6.754148977228869e-2
allele num: 5182
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 85
allele frequency: 2.122877122877123e-2
allele num: 4004
num of homozygotes: 0

African
type: Population
allele count: 2693
allele frequency: 3.557463672391017e-1
allele num: 7570
num of homozygotes: 302

East Asian
type: Population
allele count: 204
allele frequency: 5.217391304347826e-2
allele num: 3910
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

QD
type: SiteQuality
SIO_000300: 5.24e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.339e-1

DP
type: SiteQuality
SIO_000300: 2.438086e6

GenotypeQuality
all individuals: 2707
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1711
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3230
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 2884
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4269
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4711
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20251
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.557544757033248e-4
allele num: 3910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7208
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-2

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.339e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

DP
type: SiteQuality
SIO_000300: 2.438086e6

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.24e0

GenotypeQuality
all individuals: 384
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2720
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5566
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1876
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2896
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17125
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2552
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.312135665076842e-5
allele num: 30192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2794
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.71291538198013e-4
allele num: 5838
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-1

QD
type: SiteQuality
SIO_000300: 6.5e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.895984e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.851e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

GenotypeQuality
all individuals: 1406
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3684
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3816
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1893
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2621
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2775
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1844
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11789
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6143
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2402
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.192344778434578e-5
allele num: 47706
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.173151e6

QD
type: SiteQuality
SIO_000300: 1.499e1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.37e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.42e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 22987
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8483
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3204
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.76056338028169e-4
allele num: 11360
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.223091976516634e-4
allele num: 16352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.665654800233036e-5
allele num: 65226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.21921482565228e-4
allele num: 8202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

DP
type: SiteQuality
SIO_000300: 2.084884e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.123e1

FS
type: SiteQuality
SIO_000300: 2.833e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.718e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8709
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8661
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24792
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8236
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.735202492211838e-5
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65466
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.029999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -2.305e0

MQRankSum
type: SiteQuality
SIO_000300: -1.775e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.67e-1

MQ
type: SiteQuality
SIO_000300: 6.057e1

DP
type: SiteQuality
SIO_000300: 2.08966e6

GenotypeQuality
all individuals: 199
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8645
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3166
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.184e0

QD
type: SiteQuality
SIO_000300: 1.122e1

DP
type: SiteQuality
SIO_000300: 2.149367e6

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

FS
type: SiteQuality
SIO_000300: 1.562e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.08e-1

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8645
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32038
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505857614899369e-5
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European (Finnish)
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East Asian
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South Asian
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VQSLOD
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FS
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ClippingRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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ClippingRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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DP
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SIO_000300: 2.15486e6

VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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Other
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Latino
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African
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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MQRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 1.923076923076923e-4
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
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allele num: 66718
num of homozygotes: 0

South Asian
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European (Finnish)
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East Asian
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Other
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Latino
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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DP
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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Latino
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European (Finnish)
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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FS
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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Other
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African
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European (Finnish)
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MQRankSum
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DP
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QD
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MQ
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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East Asian
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South Asian
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European (Finnish)
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Other
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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DP
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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Latino
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African
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QD
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FS
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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Other
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Latino
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South Asian
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European (Finnish)
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MQ
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Latino
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Other
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European (Non-Finnish)
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East Asian
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ClippingRankSum
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MQ
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele num: 6614
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South Asian
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African
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European (Non-Finnish)
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East Asian
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Other
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Latino
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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African
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South Asian
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Other
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QD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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MQ
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FS
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VQSLOD
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QD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2004
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 3.46e0

ReadPosRankSum
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SIO_000300: -9.45e-1

MQRankSum
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VQSLOD
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QD
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SIO_000300: 1.358e1

MQ
type: SiteQuality
SIO_000300: 5.925e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
SIO_000300: 2.153411e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1998
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GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.493e0

VQSLOD
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FS
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
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SIO_000300: -1.147e0

QD
type: SiteQuality
SIO_000300: 1.223e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 2.152182e6

GenotypeDepth
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3090
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

Latino
type: Population
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allele frequency: 7.805724197745013e-4
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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SIO_000300: 1.227e1

BaseQRankSum
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SIO_000300: 2.63e0

VQSLOD
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SIO_000300: 4.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

ReadPosRankSum
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SIO_000300: 3.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.69e-1

DP
type: SiteQuality
SIO_000300: 2.151381e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 800
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variant carriers: 0

GenotypeQuality
all individuals: 1995
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.150473e6

MQ
type: SiteQuality
SIO_000300: 5.88e1

MQRankSum
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SIO_000300: 6.57e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

VQSLOD
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SIO_000300: -2.992e-1

FS
type: SiteQuality
SIO_000300: 1.478e0

ReadPosRankSum
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SIO_000300: -9.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.566e0

QD
type: SiteQuality
SIO_000300: 1.513e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1057
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166044776119403e-4
allele num: 8576
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
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VQSLOD
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ReadPosRankSum
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SIO_000300: -5.9e-2

FS
type: SiteQuality
SIO_000300: 1.0813e1

MQRankSum
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SIO_000300: 6.919999999999999e-1

BaseQRankSum
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SIO_000300: 4.53e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.44081034903588e-4
allele num: 16388
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
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MQRankSum
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QD
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MQ
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InbreedingCoeff
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DP
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.770391159445712e-5
allele num: 11402
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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MQ
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FS
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QD
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ClippingRankSum
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SIO_000300: 7.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3658
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 7.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.823e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

DP
type: SiteQuality
SIO_000300: 2.24096e6

MQ
type: SiteQuality
SIO_000300: 5.913e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.72e-1

GenotypeQuality
all individuals: 28179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10023
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2819
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11394
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2260
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.241065e6

MQRankSum
type: SiteQuality
SIO_000300: 7.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-1

FS
type: SiteQuality
SIO_000300: 8.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.94e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3655
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.836e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-1

FS
type: SiteQuality
SIO_000300: 1.308e0

DP
type: SiteQuality
SIO_000300: 2.24113e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.295e1

GenotypeQuality
all individuals: 3654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28214
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11391
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 875
bin: 8.75e1
variant carriers: 0