10-22615454-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615454
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615454
    reference: chr 10
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.7A>G
  hgvsp: ENSP00000390768.1:p.Ile3Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.76A>G
  hgvsp: ENSP00000397912.1:p.Ile26Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.76A>G
  hgvsp: ENSP00000399220.1:p.Ile26Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.76A>G
  hgvsp: ENSP00000365851.3:p.Ile26Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.505A>G
  hgvsp: ENSP00000473391.1:p.Ile169Val
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473382
  ensembl transcript: ENST00000475460
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000475460.2:c.445A>G
  hgvsp: ENSP00000473382.1:p.Ile149Val
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.148A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.239A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.333A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.207A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile169Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP

10-22615469-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615469
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615469
    reference: chr 10
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.163A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*54A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.91A>G
  hgvsp: ENSP00000365851.3:p.Ile31Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.91A>G
  hgvsp: ENSP00000399220.1:p.Ile31Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.91A>G
  hgvsp: ENSP00000397912.1:p.Ile31Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.222A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.348A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.520A>G
  hgvsp: ENSP00000473391.1:p.Ile174Val
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.254A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.22A>G
  hgvsp: ENSP00000390768.1:p.Ile8Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473382
  ensembl transcript: ENST00000475460
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000475460.2:c.460A>G
  hgvsp: ENSP00000473382.1:p.Ile154Val
  variant of: http://identifiers.org/hgnc/48326
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile174Val
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-22615474-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615474
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615474
    reference: chr 10
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.96A>C
  hgvsp: ENST00000442508.1:c.96A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.96A>C
  hgvsp: ENST00000416820.1:c.96A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.525A>C
  hgvsp: ENST00000602390.1:c.525A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*59A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.27A>C
  hgvsp: ENST00000443519.1:c.27A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.259A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473382
  ensembl transcript: ENST00000475460
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000475460.2:c.465A>C
  hgvsp: ENST00000475460.2:c.465A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.96A>C
  hgvsp: ENST00000376663.3:c.96A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.353A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.227A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.168A>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile175Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

10-22615488-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615488
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615488
    reference: chr 10
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.539C>T
  hgvsp: ENSP00000473391.1:p.Ser180Phe
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.41C>T
  hgvsp: ENSP00000390768.1:p.Ser14Phe
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*73C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.241C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.273C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.182C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.110C>T
  hgvsp: ENSP00000365851.3:p.Ser37Phe
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.110C>T
  hgvsp: ENSP00000399220.1:p.Ser37Phe
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.110C>T
  hgvsp: ENSP00000397912.1:p.Ser37Phe
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.367C>T
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser37Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

10-22615491-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615491
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615492
    reference: chr 10
allele count: 2
allele frequency: 1.650709805216243e-5
allele num: 121160
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.371dupT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+2dupT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+2dupT
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+2dupT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+2dupT
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.277dupT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+2dupT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+2dupT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+2dupT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.186dupT
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: splice donor
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3131
  bin: 7.25e1
  variant carriers: 0
hgvs: c.112+2dupT
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

10-22615499-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615499
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615499
    reference: chr 10
allele count: 2
allele frequency: 1.652510162937502e-5
allele num: 121028
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+9C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+9C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+9C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.284C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+9C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.378C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+9C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+9C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.193C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+9C>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

10-22615500-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615500
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615500
    reference: chr 10
allele count: 22
allele frequency: 1.817550932734092e-4
allele num: 121042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+10G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.379G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+10G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+10G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.285G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+10G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+10G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+10G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+10G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.194G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

10-22615502-GCTTTAGCTCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615502
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615492
    reference: chr 10
allele count: 2
allele frequency: 1.652728655009421e-5
allele num: 121012
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13528
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21354
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: GCTTTAGCTCT
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

10-22615506-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615506
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615507
    reference: chr 10
allele count: 3
allele frequency: 2.480363786688714e-5
allele num: 120950
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+17dupA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+17dupA
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.292dupA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.386dupA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.201dupA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+17dupA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+17dupA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+17dupA
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+17dupA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+17dupA
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

10-22615508-GCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615508
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615506
    reference: chr 10
allele count: 1
allele frequency: 8.270751315049459e-6
allele num: 120908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.392_393delCT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+23_541+24delCT
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+23_43+24delCT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+23_*75+24delCT
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+23_112+24delCT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+23_112+24delCT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.207_208delCT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.298_299delCT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+23_112+24delCT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+23_243+24delCT
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20817
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: GCT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

10-22615510-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615510
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615510
    reference: chr 10
allele count: 1
allele frequency: 8.272803984182399e-6
allele num: 120878
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+20T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+20T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+20T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+20T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.295T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.389T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.204T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+20T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+20T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+20T>C
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

10-22615513-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615513
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615513
    reference: chr 10
allele count: 1
allele frequency: 8.277323444690924e-6
allele num: 120812
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.207C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+23C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+23C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+23C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.298C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+23C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.392C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+23C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+23C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+23C>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6336
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

10-22615515-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615515
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615515
    reference: chr 10
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.209T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+25T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.394T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.300T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+25T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+25T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+25T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+25T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+25T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+25T>C
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

10-22615516-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615516
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615516
    reference: chr 10
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.210T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.301T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.395T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+26T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+26T>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+26T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+26T>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+26T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+26T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+26T>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

10-22615520-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615520
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615520
    reference: chr 10
allele count: 6
allele frequency: 4.967792147576546e-5
allele num: 120778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.305A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.214A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+30A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+30A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+30A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+30A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+30A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.399A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+30A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+30A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3091
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-22615523-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615523
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615523
    reference: chr 10
allele count: 3
allele frequency: 2.484636663298604e-5
allele num: 120742
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.402A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+33A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+33A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+33A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.217A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+33A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+33A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+33A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+33A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.308A>C
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

10-22615526-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615526
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615526
    reference: chr 10
allele count: 63
allele frequency: 5.225700492708904e-4
allele num: 120558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.311C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.220C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+36C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.405C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+36C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+36C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+36C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+36C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+36C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+36C>T
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10095
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16635
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12836
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS

10-22615527-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615527
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615527
    reference: chr 10
allele count: 1
allele frequency: 8.291598951941893e-6
allele num: 120604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+37G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+37G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+37G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.221G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+37G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+37G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.312G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.406G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+37G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+37G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17697
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/10-22615536-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615536
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615536
    reference: chr 10
allele count: 32
allele frequency: 2.660326222503035e-4
allele num: 120286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+46A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.415A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+46A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+46A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+46A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+46A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.321A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.230A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+46A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+46A>C
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15633
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6027
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14846
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

10-22615536-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615536
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615536
    reference: chr 10
allele count: 1
allele frequency: 8.313519445321983e-6
allele num: 120286
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+46A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+46A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.230A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.321A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.415A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+46A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+46A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+46A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+46A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+46A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14472
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

10-22615540-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615540
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615540
    reference: chr 10
allele count: 1
allele frequency: 8.344459279038718e-6
allele num: 119840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+50C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+50C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+50C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.234C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.419C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+50C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+50C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.325C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+50C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+50C>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3011
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

10-22615541-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615541
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615541
    reference: chr 10
allele count: 1
allele frequency: 8.347384764353328e-6
allele num: 119798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.326G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+51G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+51G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+51G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.235G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.420G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+51G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+51G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+51G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+51G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP

10-22615541-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615541
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615541
    reference: chr 10
allele count: 1
allele frequency: 8.347384764353328e-6
allele num: 119798
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+51G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+51G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+51G>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.326G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+51G>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.420G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.235G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+51G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+51G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+51G>C
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3015
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2193
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

10-22615542-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615542
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615542
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 119798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.421A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.243+52A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.112+52A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.236A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.541+52A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.112+52A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*75+52A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.112+52A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602524
  gene symbol: BMI1
  hgvsc: ENST00000602524.1:n.327A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.43+52A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4117
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/10-22615775-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615775
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615775
    reference: chr 10
allele count: 1
allele frequency: 8.263506701703935e-6
allele num: 121014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-44A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.469A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-44A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-44A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-44A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-44A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.654A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-44A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-44A>C
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36685
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2591
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3184
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

10-22615776-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615776
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615776
    reference: chr 10
allele count: 1
allele frequency: 8.268836409340477e-6
allele num: 120936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-43C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-43C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-43C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-43C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-43C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-43C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.470C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.655C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-43C>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

10-22615785-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615785
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615785
    reference: chr 10
allele count: 1
allele frequency: 8.257092842751923e-6
allele num: 121108
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-34A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-34A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.479A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.664A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-34A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-34A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-34A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-34A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-34A>G
  variant of: http://identifiers.org/hgnc/48326
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum

10-22615788-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615788
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615786
    reference: chr 10
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-29_542-28delTA
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-29_113-28delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.484_485delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-29_113-28delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.669_670delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-29_113-28delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-29_244-28delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-29_44-28delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-29_*76-28delTA
  variant of: http://identifiers.org/hgnc/48326
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2596
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2803
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: CAT
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/10-22615795-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615795
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615795
    reference: chr 10
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.674A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-24A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-24A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-24A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-24A>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-24A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.489A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-24A>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-24A>C
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36688
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

10-22615801-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615801
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615801
    reference: chr 10
allele count: 2
allele frequency: 1.649158104787506e-5
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-18C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-18C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-18C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-18C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.495C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-18C>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.680C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-18C>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-18C>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

10-22615802-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615802
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615802
    reference: chr 10
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.496A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-17A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-17A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.681A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-17A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-17A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-17A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-17A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-17A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-22615803-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615803
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615801
    reference: chr 10
allele count: 3
allele frequency: 2.473329266080762e-5
allele num: 121294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.683_684delAT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-15_113-14delAT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-15_44-14delAT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.498_499delAT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-15_113-14delAT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-15_*76-14delAT
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-15_542-14delAT
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-15_113-14delAT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-15_244-14delAT
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: CAT
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

10-22615811-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615811
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615811
    reference: chr 10
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-8A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-8A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.690A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-8A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.505A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-8A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-8A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-8A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-8A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36691
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9233
  bin: 6.25e1
  variant carriers: 0
hgvs: c.113-8A>G
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

10-22615812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615812
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615812
    reference: chr 10
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.542-7C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.113-7C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.506C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.113-7C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.244-7C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.691C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.44-7C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.113-7C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*76-7C>T
  variant of: http://identifiers.org/hgnc/48326
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 6.75e1
  variant carriers: 0
hgvs: c.113-7C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

10-22615829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615829
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615829
    reference: chr 10
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.123G>A
  hgvsp: ENST00000416820.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.123G>A
  hgvsp: ENST00000376663.3:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.552G>A
  hgvsp: ENST00000602390.1:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.254G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*86G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.54G>A
  hgvsp: ENST00000443519.1:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.123G>A
  hgvsp: ENST00000442508.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.708G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.523G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr184Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

10-22615840-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615840
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615840
    reference: chr 10
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.563G>C
  hgvsp: ENSP00000473391.1:p.Arg188Pro
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.65G>C
  hgvsp: ENSP00000390768.1:p.Arg22Pro
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.134G>C
  hgvsp: ENSP00000399220.1:p.Arg45Pro
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.534G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.719G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.134G>C
  hgvsp: ENSP00000397912.1:p.Arg45Pro
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.134G>C
  hgvsp: ENSP00000365851.3:p.Arg45Pro
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*97G>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.265G>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg188Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD

10-22615844-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615844
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615844
    reference: chr 10
allele count: 4
allele frequency: 3.294947198471145e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.138C>T
  hgvsp: ENST00000376663.3:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.567C>T
  hgvsp: ENST00000602390.1:c.567C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.138C>T
  hgvsp: ENST00000416820.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.69C>T
  hgvsp: ENST00000443519.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*101C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.538C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.269C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.138C>T
  hgvsp: ENST00000442508.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.723C>T
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr189Tyr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ

10-22615848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615848
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615848
    reference: chr 10
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.542G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.571G>A
  hgvsp: ENSP00000473391.1:p.Glu191Lys
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.73G>A
  hgvsp: ENSP00000390768.1:p.Glu25Lys
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.727G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.142G>A
  hgvsp: ENSP00000399220.1:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.273G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*105G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.142G>A
  hgvsp: ENSP00000365851.3:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.142G>A
  hgvsp: ENSP00000397912.1:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu191Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

10-22615859-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615859
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615859
    reference: chr 10
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.553G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.738G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.153G>A
  hgvsp: ENST00000442508.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.284G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*116G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.84G>A
  hgvsp: ENST00000443519.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.153G>A
  hgvsp: ENST00000376663.3:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.582G>A
  hgvsp: ENST00000602390.1:c.582G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.153G>A
  hgvsp: ENST00000416820.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36691
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys194Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

10-22615869-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615869
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615869
    reference: chr 10
allele count: 3
allele frequency: 2.471210398853358e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*126A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.163A>G
  hgvsp: ENSP00000365851.3:p.Ile55Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.294A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.163A>G
  hgvsp: ENSP00000397912.1:p.Ile55Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.592A>G
  hgvsp: ENSP00000473391.1:p.Ile198Val
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.563A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.94A>G
  hgvsp: ENSP00000390768.1:p.Ile32Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.163A>G
  hgvsp: ENSP00000399220.1:p.Ile55Val
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602523
  gene symbol: BMI1
  hgvsc: ENST00000602523.1:n.748A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile198Val
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

10-22615880-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615880
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615880
    reference: chr 10
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.174C>T
  hgvsp: ENST00000442508.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.174C>T
  hgvsp: ENST00000376663.3:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*137C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.603C>T
  hgvsp: ENST00000602390.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.574C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.305C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.174C>T
  hgvsp: ENST00000416820.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.105C>T
  hgvsp: ENST00000443519.1:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val201Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

10-22615892-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615892
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615892
    reference: chr 10
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.186G>A
  hgvsp: ENST00000416820.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.615G>A
  hgvsp: ENST00000602390.1:c.615G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.186G>A
  hgvsp: ENST00000376663.3:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.117G>A
  hgvsp: ENST00000443519.1:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*149G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.186G>A
  hgvsp: ENST00000442508.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.586G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.317G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9309
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys205Lys
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

10-22615895-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615895
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615895
    reference: chr 10
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.120C>T
  hgvsp: ENST00000443519.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.618C>T
  hgvsp: ENST00000602390.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.189C>T
  hgvsp: ENST00000376663.3:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.189C>T
  hgvsp: ENST00000416820.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*152C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.320C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.189C>T
  hgvsp: ENST00000442508.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.589C>T
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr206Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

10-22615919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615919
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615919
    reference: chr 10
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+4G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+4G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+4G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+4G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+4G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+4G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+4G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+4G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36689
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: c.638+4G>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

10-22615924-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615924
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615924
    reference: chr 10
allele count: 2
allele frequency: 1.648315421639085e-5
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+9C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+9C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+9C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+9C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+9C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+9C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+9C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+9C>T
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

10-22615927-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615927
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615927
    reference: chr 10
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+12T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+12T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+12T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+12T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+12T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+12T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+12T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+12T>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3330
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36686
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

10-22615929-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615929
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615929
    reference: chr 10
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+14G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+14G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+14G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+14G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+14G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+14G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+14G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+14G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36686
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9050
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

10-22615937-TTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615937
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615935
    reference: chr 10
allele count: 4
allele frequency: 3.300384494793644e-5
allele num: 121198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+24_140+25delGT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+24_209+25delGT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+24_209+25delGT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+24_340+25delGT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+24_609+25delGT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+24_209+25delGT
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+24_*172+25delGT
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+24_638+25delGT
  variant of: http://identifiers.org/hgnc/48326
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3280
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: TTG
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

10-22615939-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615939
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615939
    reference: chr 10
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+24G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+24G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+24G>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+24G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+24G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+24G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+24G>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+24G>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

10-22615943-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615943
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615943
    reference: chr 10
allele count: 3
allele frequency: 2.476514388548598e-5
allele num: 121138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+28G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+28G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+28G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+28G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+28G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+28G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+28G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+28G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

10-22615950-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615950
    reference: chr 10
allele count: 2
allele frequency: 1.651855033202286e-5
allele num: 121076
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+35T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+35T>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+35T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+35T>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+35T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+35T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+35T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+35T>G
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7682
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

10-22615952-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615952
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615952
    reference: chr 10
allele count: 1
allele frequency: 8.259275166011431e-6
allele num: 121076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+37A>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+37A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+37A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+37A>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+37A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+37A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+37A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+37A>T
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5281
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

10-22615956-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615956
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615956
    reference: chr 10
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+41G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+41G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+41G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+41G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+41G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+41G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+41G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+41G>A
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7011
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36683
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS

10-22615956-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615956
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615956
    reference: chr 10
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+41G>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+41G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+41G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+41G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+41G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+41G>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+41G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+41G>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2589
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7011
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36683
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

10-22615962-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615962
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615962
    reference: chr 10
allele count: 3
allele frequency: 2.481635894381576e-5
allele num: 120888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+47T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+47T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+47T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+47T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+47T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+47T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+47T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+47T>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36678
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2885
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

10-22615967-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22615967
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22615967
    reference: chr 10
allele count: 34
allele frequency: 2.814336561542919e-4
allele num: 120810
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.609+52T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.209+52T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.209+52T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.340+52T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.209+52T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*172+52T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+52T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.638+52T>C
  variant of: http://identifiers.org/hgnc/48326
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6191
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2612
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

10-22616478-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616478
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616478
    reference: chr 10
allele count: 1
allele frequency: 8.55636936135259e-6
allele num: 116872
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.639-46T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.341-46T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+563T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.210-46T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.210-46T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.610-46T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.210-46T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*173-46T>C
  variant of: http://identifiers.org/hgnc/48326
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8647
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2460
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1764
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21572
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4321
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

10-22616484-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616484
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616484
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 116898
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.639-40C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.140+569C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.210-40C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.210-40C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.341-40C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*173-40C>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.610-40C>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.210-40C>T
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10146
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-22616495-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616495
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616493
    reference: chr 10
allele count: 1
allele frequency: 8.507307777380771e-6
allele num: 117546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-566_141-565delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.210-27_210-26delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.341-27_341-26delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.210-27_210-26delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*173-27_*173-26delTA
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.639-27_639-26delTA
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.210-27_210-26delTA
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.610-27_610-26delTA
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9471
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3981
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21639
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: CAT
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-22616496-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616496
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616496
    reference: chr 10
allele count: 1
allele frequency: 8.499498529586754e-6
allele num: 117654
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.210-28A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.639-28A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.341-28A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-567A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.610-28A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*173-28A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.210-28A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.210-28A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4003
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1533
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21644
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

10-22616499-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616499
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616499
    reference: chr 10
allele count: 131
allele frequency: 1.110734271663558e-3
allele num: 117940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.610-25G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.210-25G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*173-25G>A
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.210-25G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-564G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.210-25G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.341-25G>A
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.639-25G>A
  variant of: http://identifiers.org/hgnc/48326
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13676
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9463
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4916
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3482
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

10-22616505-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616505
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616505
    reference: chr 10
allele count: 1
allele frequency: 8.441953130276222e-6
allele num: 118456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.210-19T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.639-19T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.210-19T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.610-19T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.210-19T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*173-19T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.341-19T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-558T>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13865
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3497
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4062
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

10-22616506-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616506
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616506
    reference: chr 10
allele count: 1
allele frequency: 8.43397881384522e-6
allele num: 118568
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.210-18A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.210-18A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.341-18A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-557A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.639-18A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*173-18A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.210-18A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.610-18A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4072
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

10-22616518-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616518
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616518
    reference: chr 10
allele count: 3
allele frequency: 2.511132688251247e-5
allele num: 119468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.210-6T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-545T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.639-6T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.341-6T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.210-6T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*173-6T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.610-6T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.210-6T>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 2.25e1
  variant carriers: 0
hgvs: c.639-6T>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

10-22616545-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616545
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616545
    reference: chr 10
allele count: 11
allele frequency: 9.157661632727817e-5
allele num: 120118
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.660T>C
  hgvsp: ENST00000602390.1:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.231T>C
  hgvsp: ENST00000416820.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.231T>C
  hgvsp: ENST00000376663.3:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*194T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.231T>C
  hgvsp: ENST00000442508.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-518T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.631T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.362T>C
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3523
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21725
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15593
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp220Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

10-22616548-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616548
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616548
    reference: chr 10
allele count: 1
allele frequency: 8.321959988016378e-6
allele num: 120164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.634T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*197T>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.663T>G
  hgvsp: ENSP00000473391.1:p.Ile221Met
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.234T>G
  hgvsp: ENSP00000397912.1:p.Ile78Met
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-515T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.234T>G
  hgvsp: ENSP00000399220.1:p.Ile78Met
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.365T>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.234T>G
  hgvsp: ENSP00000365851.3:p.Ile78Met
  variant of: http://identifiers.org/hgnc/1066
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4359
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3523
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile221Met
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

10-22616607-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616607
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616607
    reference: chr 10
allele count: 10
allele frequency: 8.291736455448499e-5
allele num: 120602
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.694+28T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*228+28T>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.265+28T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-456T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.424T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.265+28T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.265+28T>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.665+28T>C
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4131
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15942
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2239
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21726
  bin: 9.75e1
  variant carriers: 10
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

10-22616613-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616613
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616613
    reference: chr 10
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.665+34G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.265+34G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.430G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.265+34G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.265+34G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*228+34G>C
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-450G>C
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.694+34G>C
  variant of: http://identifiers.org/hgnc/48326
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21726
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ

10-22616614-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616614
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616614
    reference: chr 10
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.265+35A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.265+35A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.694+35A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.665+35A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*228+35A>G
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-449A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.431A>G
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.265+35A>G
  variant of: http://identifiers.org/hgnc/1066
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10411
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

10-22616621-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 22616621
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 22616621
    reference: chr 10
allele count: 1
allele frequency: 8.282808203293245e-6
allele num: 120732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000602358
  gene symbol: BMI1
  hgvsc: ENST00000602358.1:n.665+42A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000390768
  ensembl transcript: ENST00000443519
  gene symbol: BMI1
  hgvsc: ENST00000443519.1:c.141-442A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000397912
  ensembl transcript: ENST00000442508
  gene symbol: BMI1
  hgvsc: ENST00000442508.1:c.265+42A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000399220
  ensembl transcript: ENST00000416820
  gene symbol: BMI1
  hgvsc: ENST00000416820.1:c.265+42A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168283
  ensembl protein: ENSP00000365851
  ensembl transcript: ENST00000376663
  gene symbol: BMI1
  hgvsc: ENST00000376663.3:c.265+42A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168283
  ensembl transcript: ENST00000456675
  gene symbol: BMI1
  hgvsc: ENST00000456675.2:n.438A>T
  variant of: http://identifiers.org/hgnc/1066
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000398759
  ensembl transcript: ENST00000417470
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000417470.1:c.*228+42A>T
  variant of: http://identifiers.org/hgnc/48326
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269897
  ensembl protein: ENSP00000473391
  ensembl transcript: ENST00000602390
  gene symbol: COMMD3-BMI1
  hgvsc: ENST00000602390.1:c.694+42A>T
  variant of: http://identifiers.org/hgnc/48326
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4841
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22374
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4134
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14436
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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African
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South Asian
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Other
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Non-Finnish)
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Latino
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African
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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MQ
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QD
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MQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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East Asian
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Other
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European (Finnish)
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FS
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QD
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ReadPosRankSum
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 10398
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Latino
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MQRankSum
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FS
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BaseQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 66614
num of homozygotes: 0

Other
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Latino
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African
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East Asian
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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DP
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QD
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FS
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66566
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Other
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South Asian
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MQ
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QD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 22

African
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allele num: 10398
num of homozygotes: 0

Other
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Latino
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East Asian
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European (Finnish)
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South Asian
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European (Non-Finnish)
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FS
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QD
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InbreedingCoeff
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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DP
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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East Asian
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African
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Other
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DP
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ClippingRankSum
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FS
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Other
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European (Finnish)
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Latino
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East Asian
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South Asian
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VQSLOD
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InbreedingCoeff
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FS
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QD
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DP
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
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African
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Latino
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East Asian
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European (Non-Finnish)
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DP
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MQ
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Finnish)
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Other
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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Other
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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ClippingRankSum
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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Other
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VQSLOD
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DP
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 5
allele frequency: 4.812319538017325e-4
allele num: 10390
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 56
allele frequency: 8.430433866257189e-4
allele num: 66426
num of homozygotes: 0

Other
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allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 4.96e0

QD
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DP
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
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MQ
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SIO_000300: 6.0e1

MQRankSum
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SIO_000300: 1.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16050
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African
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allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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DP
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FS
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 1.0e-4

VQSLOD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 2.018163471241171e-3
allele num: 15856
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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VQSLOD
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DP
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15856
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66342
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.317e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

InbreedingCoeff
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SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 1.934301e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510665296996797e-5
allele num: 66196
num of homozygotes: 0

East Asian
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allele num: 8630
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.27e-1

DP
type: SiteQuality
SIO_000300: 1.935984e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66182
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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ClippingRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 1.159823706796567e-4
allele num: 8622
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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ReadPosRankSum
type: SiteQuality
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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Latino
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East Asian
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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DP
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BaseQRankSum
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MQ
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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FS
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ClippingRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.503533303262667e-5
allele num: 66510
num of homozygotes: 0

VQSLOD
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MQ
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ReadPosRankSum
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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MQRankSum
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ClippingRankSum
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SIO_000300: -9.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66582
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South Asian
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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DP
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66592
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South Asian
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allele frequency: 6.094588005850804e-5
allele num: 16408
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
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SIO_000300: 1.02e0

ReadPosRankSum
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FS
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DP
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MQRankSum
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BaseQRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 6.044e1

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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FS
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SIO_000300: 0.0e0

ClippingRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 5.772e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66656
num of homozygotes: 0

South Asian
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.500105007350515e-5
allele num: 66662
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InbreedingCoeff
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MQ
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FS
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QD
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Non-Finnish)
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num of homozygotes: 0

Latino
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African
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South Asian
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Other
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East Asian
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European (Finnish)
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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Latino
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African
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East Asian
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MQRankSum
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ReadPosRankSum
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SIO_000300: -3.8e-2

DP
type: SiteQuality
SIO_000300: 3.016325e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.419e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

FS
type: SiteQuality
SIO_000300: 4.192e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36692
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.016548e6

MQ
type: SiteQuality
SIO_000300: 5.915e1

FS
type: SiteQuality
SIO_000300: 8.117000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.226e0

QD
type: SiteQuality
SIO_000300: 1.32e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.665e-1

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.827e1

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

DP
type: SiteQuality
SIO_000300: 3.017439e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-2

QD
type: SiteQuality
SIO_000300: 1.101e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 3.338e0

VQSLOD
type: SiteQuality
SIO_000300: -1.316e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.13e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.905e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

FS
type: SiteQuality
SIO_000300: 2.737e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

DP
type: SiteQuality
SIO_000300: 3.017507e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36693
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1611
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variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.196e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.74e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.7e-3

DP
type: SiteQuality
SIO_000300: 3.017778e6

FS
type: SiteQuality
SIO_000300: 2.753e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

FS
type: SiteQuality
SIO_000300: 5.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.234e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.45e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e0

VQSLOD
type: SiteQuality
SIO_000300: -1.716e0

QD
type: SiteQuality
SIO_000300: 1.149e1

DP
type: SiteQuality
SIO_000300: 3.017601e6

GenotypeQuality
all individuals: 1612
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-2

FS
type: SiteQuality
SIO_000300: 5.715e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.044e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.212e0

DP
type: SiteQuality
SIO_000300: 3.017586e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.208e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.752e0

DP
type: SiteQuality
SIO_000300: 3.018063e6

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2674
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.018139e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.289e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.189e0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66724
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10404
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Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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ClippingRankSum
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SIO_000300: 9.18e-1

DP
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

MQRankSum
type: SiteQuality
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VQSLOD
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MQ
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SIO_000300: 5.98e1

ReadPosRankSum
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BaseQRankSum
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FS
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DP
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SIO_000300: 3.017498e6

ClippingRankSum
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SIO_000300: -3.721e0

InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.85e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 7.93e-1

FS
type: SiteQuality
SIO_000300: 2.571e0

MQ
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SIO_000300: 5.946e1

InbreedingCoeff
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SIO_000300: -1.0e-4

DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.023e0

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.519e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 3.015264e6

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.84e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.382e0

DP
type: SiteQuality
SIO_000300: 3.013094e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.68e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

QD
type: SiteQuality
SIO_000300: 1.38e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 4
allele frequency: 4.630701551285019e-4
allele num: 8638
num of homozygotes: 0

Latino
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allele count: 0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66626
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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BaseQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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MQRankSum
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SIO_000300: 1.23e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

Other
type: Population
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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MQRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

Latino
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African
type: Population
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South Asian
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allele frequency: 1.819284414796847e-4
allele num: 16490
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European (Finnish)
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allele num: 6608
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Other
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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DP
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 2589
bin: 8.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 2.048e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

QD
type: SiteQuality
SIO_000300: 1.562e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.03e-1

DP
type: SiteQuality
SIO_000300: 2.998244e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.19e-2

FS
type: SiteQuality
SIO_000300: 2.935e0

MQRankSum
type: SiteQuality
SIO_000300: -4.15e-1

QD
type: SiteQuality
SIO_000300: 1.735e1

DP
type: SiteQuality
SIO_000300: 2.997058e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502358703163967e-5
allele num: 66562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.412e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 2.992811e6

QD
type: SiteQuality
SIO_000300: 1.64e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e0

DP
type: SiteQuality
SIO_000300: 2.992811e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.64e1

VQSLOD
type: SiteQuality
SIO_000300: -5.412e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.06e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 2799
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66496
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.823264859608606e-4
allele num: 16454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.87e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

QD
type: SiteQuality
SIO_000300: 1.775e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.18e0

DP
type: SiteQuality
SIO_000300: 2.987612e6

GenotypeQuality
all individuals: 770
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 34

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1501
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variant carriers: 0

GenotypeQuality
all individuals: 2594
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 23
allele frequency: 2.240405221118254e-3
allele num: 10266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.53371468192061e-4
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

DP
type: SiteQuality
SIO_000300: 2.987845e6

QD
type: SiteQuality
SIO_000300: 1.627e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.63e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.739730816290858e-5
allele num: 11442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.154e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.027e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.305e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.049672e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4447
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15690
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.95e0

VQSLOD
type: SiteQuality
SIO_000300: -1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.069326e6

MQ
type: SiteQuality
SIO_000300: 5.739e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 232
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.303580433686334e-5
allele num: 15864
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

DP
type: SiteQuality
SIO_000300: 2.104108e6

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: 4.61e0

QD
type: SiteQuality
SIO_000300: 1.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 551
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GenotypeQuality
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GenotypeQuality
all individuals: 2621
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 540
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GenotypeQuality
all individuals: 3483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12976
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9544
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.911e1

FS
type: SiteQuality
SIO_000300: 3.617e0

QD
type: SiteQuality
SIO_000300: 1.425e1

VQSLOD
type: SiteQuality
SIO_000300: 3.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.886e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.106532e6

GenotypeQuality
all individuals: 398
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 131

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2625250501002e-5
allele num: 15968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.378378378378379e-3
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.224660397074191e-4
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 98
allele frequency: 1.025748377642872e-2
allele num: 9554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.535089606836556e-4
allele num: 65062
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e-1

QD
type: SiteQuality
SIO_000300: 1.245e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.116346e6

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.976e0

FS
type: SiteQuality
SIO_000300: 8.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65316
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.044713748432929e-4
allele num: 9572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 2.586e0

DP
type: SiteQuality
SIO_000300: 2.125405e6

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

QD
type: SiteQuality
SIO_000300: 1.555e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529519730804527e-5
allele num: 65380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.102e0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

DP
type: SiteQuality
SIO_000300: 2.127086e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.367e0

QD
type: SiteQuality
SIO_000300: 1.712e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.94e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.075980900975711e-4
allele num: 9634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

QD
type: SiteQuality
SIO_000300: 1.398e1

DP
type: SiteQuality
SIO_000300: 2.14147e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 6.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: -4.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.72e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.127511275112751e-3
allele num: 9756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66210
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

QD
type: SiteQuality
SIO_000300: 1.332e1

DP
type: SiteQuality
SIO_000300: 2.151937e6

FS
type: SiteQuality
SIO_000300: 1.153e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509753004408479e-5
allele num: 66236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.152175e6

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 10
allele frequency: 1.158480074142725e-3
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66472
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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QD
type: SiteQuality
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 21727
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.160878e6

MQ
type: SiteQuality
SIO_000300: 5.914e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.211e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

FS
type: SiteQuality
SIO_000300: 6.362e0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

QD
type: SiteQuality
SIO_000300: 8.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.012e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4