11-801865-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801865
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801865
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 14730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+100C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+100C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+100C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+100C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+100C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2317C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+100C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+100C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 24295
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26462
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19687
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

11-801870-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801870
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801870
    reference: chr 11
allele count: 2
allele frequency: 1.284521515735389e-4
allele num: 15570
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+95T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+95T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+95T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+95T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+95T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2312T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+95T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+95T>C
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26931
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23606
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3201
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-801917-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801917
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801917
    reference: chr 11
allele count: 1
allele frequency: 1.502945773716484e-5
allele num: 66536
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+48T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2265T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+48T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+48T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+48T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+48T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+48T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+48T>C
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4637
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1764
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP

11-801921-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801921
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801921
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 66108
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+44G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+44G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+44G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+44G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+44G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+44G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+44G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2261G>C
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22096
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2887
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5307
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

11-801932-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801932
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801932
    reference: chr 11
allele count: 2
allele frequency: 3.064288778574493e-5
allele num: 65268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+33G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+33G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2250G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+33G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+33G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+33G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+33G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+33G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17485
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22479
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4445
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-801936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801936
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801936
    reference: chr 11
allele count: 47
allele frequency: 7.244589678771811e-4
allele num: 64876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+29G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+29G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+29G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+29G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+29G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+29G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+29G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2246G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22541
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17445
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6363
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-801937-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801937
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801937
    reference: chr 11
allele count: 2
allele frequency: 3.098853424233034e-5
allele num: 64540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+28C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+28C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+28C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+28C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2245C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+28C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+28C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+28C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17406
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22576
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4704
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

11-801942-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801942
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801942
    reference: chr 11
allele count: 6
allele frequency: 9.512032721392562e-5
allele num: 63078
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+23G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+23G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+23G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+23G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2240G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+23G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+23G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+23G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17124
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22826
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4870
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26219
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

11-801943-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801943
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801943
    reference: chr 11
allele count: 4
allele frequency: 6.39979520655339e-5
allele num: 62502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+22C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+22C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2239C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+22C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+22C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+22C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+22C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+22C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17016
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3245
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2921
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4999
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

11-801956-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801956
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801956
    reference: chr 11
allele count: 2
allele frequency: 3.219886016035032e-5
allele num: 62114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+9C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+9C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+9C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+9C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+9C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2226C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+9C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+9C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15671
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2417
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27542
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

11-801962-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801962
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801962
    reference: chr 11
allele count: 1
allele frequency: 1.616448984870038e-5
allele num: 61864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2253+3G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1035+3G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1317+3G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1302+3G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1302+3G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2220G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.452+3G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.122+3G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15375
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4524
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1302+3G>A
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

11-801967-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801967
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801967
    reference: chr 11
allele count: 1
allele frequency: 1.608699848782214e-5
allele num: 62162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1300C>G
  hgvsp: ENSP00000416801.2:p.Gln434Glu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1300C>G
  hgvsp: ENSP00000337797.5:p.Gln434Glu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1315C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1033C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2215C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.450C>G
  hgvsp: ENSP00000435008.1:p.Gln151Glu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2251C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.120C>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8058
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14969
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2007
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3777
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln434Glu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum

11-801970-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801970
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801970
    reference: chr 11
allele count: 15
allele frequency: 2.39097169089518e-4
allele num: 62736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1030C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.447C>T
  hgvsp: ENSP00000435008.1:p.Pro150Ser
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1297C>T
  hgvsp: ENSP00000337797.5:p.Pro433Ser
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1297C>T
  hgvsp: ENSP00000416801.2:p.Pro433Ser
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.117C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2248C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2212C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1312C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8909
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14536
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24758
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29084
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3918
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro433Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

11-801975-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801975
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801975
    reference: chr 11
allele count: 4
allele frequency: 6.306561977737837e-5
allele num: 63426
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.112A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1307A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1292A>G
  hgvsp: ENSP00000337797.5:p.Glu431Gly
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.442A>G
  hgvsp: ENSP00000435008.1:p.Glu148Gly
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2243A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1025A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1292A>G
  hgvsp: ENSP00000416801.2:p.Glu431Gly
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2207A>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10273
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3470
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29967
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1510
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu431Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

11-801977-TTCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801977
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801974
    reference: chr 11
allele count: 1
allele frequency: 1.573910853689247e-5
allele num: 63536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2238_2240delGGA
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.107_109delGGA
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1020_*1022delGGA
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1302_*1304delGGA
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1287_1289delGGA
  hgvsp: ENSP00000416801.2:p.Glu431del
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1287_1289delGGA
  hgvsp: ENSP00000337797.5:p.Glu431del
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.437_439delGGA
  hgvsp: ENSP00000435008.1:p.Glu148del
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2202_2204delGGA
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30041
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu431del
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: TTCC
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

11-801979-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801979
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801979
    reference: chr 11
allele count: 4
allele frequency: 6.290297216543481e-5
allele num: 63590
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1288G>A
  hgvsp: ENSP00000337797.5:p.Glu430Lys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2203G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1303G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2239G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1021G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.438G>A
  hgvsp: ENSP00000435008.1:p.Glu147Lys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.108G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1288G>A
  hgvsp: ENSP00000416801.2:p.Glu430Lys
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13564
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu430Lys
num of homozygotes: 1
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

11-801980-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801980
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801980
    reference: chr 11
allele count: 4
allele frequency: 6.277857994852157e-5
allele num: 63716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2202G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.107G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.437G>A
  hgvsp: ENST00000531286.1:c.437G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2238G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1287G>A
  hgvsp: ENST00000411829.2:c.1287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1302G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1287G>A
  hgvsp: ENST00000347755.5:c.1287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1020G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13519
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30428
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu429Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

11-801985-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801985
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801985
    reference: chr 11
allele count: 1
allele frequency: 1.555597038143239e-5
allele num: 64284
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.102C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1015C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.432C>G
  hgvsp: ENSP00000435008.1:p.Leu145Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1282C>G
  hgvsp: ENSP00000416801.2:p.Leu428Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2197C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1282C>G
  hgvsp: ENSP00000337797.5:p.Leu428Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1297C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2233C>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12984
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu428Val
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

11-801989-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801989
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801989
    reference: chr 11
allele count: 2
allele frequency: 3.120319520718922e-5
allele num: 64096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2229C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1278C>T
  hgvsp: ENST00000347755.5:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1278C>T
  hgvsp: ENST00000411829.2:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1293C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.98C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1011C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.428C>T
  hgvsp: ENST00000531286.1:c.428C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2193C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13011
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24990
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31099
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11950
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr426Thr
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

11-801998-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 801998
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 801998
    reference: chr 11
allele count: 1
allele frequency: 1.553422189082549e-5
allele num: 64374
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1269C>T
  hgvsp: ENST00000347755.5:c.1269C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1284C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1269C>T
  hgvsp: ENST00000411829.2:c.1269C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.89C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*1002C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.419C>T
  hgvsp: ENST00000531286.1:c.419C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2220C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2184C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12579
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2200
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp423Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ

11-802004-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802004
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802004
    reference: chr 11
allele count: 4
allele frequency: 6.257822277847309e-5
allele num: 63920
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.83G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.413G>C
  hgvsp: ENSP00000435008.1:p.Trp138Cys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1278G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2214G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1263G>C
  hgvsp: ENSP00000337797.5:p.Trp421Cys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1263G>C
  hgvsp: ENSP00000416801.2:p.Trp421Cys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*996G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2178G>C
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11448
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13138
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32167
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Trp421Cys
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

11-802005-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802005
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802005
    reference: chr 11
allele count: 1
allele frequency: 1.570993181889591e-5
allele num: 63654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.82G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1277G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2213G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.412G>A
  hgvsp: ENSP00000435008.1:p.Trp138Ter
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2177G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1262G>A
  hgvsp: ENSP00000416801.2:p.Trp421Ter
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*995G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1262G>A
  hgvsp: ENSP00000337797.5:p.Trp421Ter
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32197
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Trp421Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-802014-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802014
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802014
    reference: chr 11
allele count: 2
allele frequency: 3.182787485279608e-5
allele num: 62838
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1268A>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.73A>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1253A>T
  hgvsp: ENSP00000416801.2:p.Asp418Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2204A>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.403A>T
  hgvsp: ENSP00000435008.1:p.Asp135Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1253A>T
  hgvsp: ENSP00000337797.5:p.Asp418Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2168A>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*986A>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13880
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3704
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp418Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-802020-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802020
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802020
    reference: chr 11
allele count: 4
allele frequency: 6.493928177154361e-5
allele num: 61596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.67G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1247G>A
  hgvsp: ENSP00000337797.5:p.Arg416Gln
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.397G>A
  hgvsp: ENSP00000435008.1:p.Arg133Gln
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1262G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2198G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*980G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2162G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1247G>A
  hgvsp: ENSP00000416801.2:p.Arg416Gln
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14111
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10121
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg416Gln
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

11-802021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802021
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802021
    reference: chr 11
allele count: 3
allele frequency: 4.866811589500665e-5
allele num: 61642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.66C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2161C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.396C>T
  hgvsp: ENSP00000435008.1:p.Arg133Trp
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1261C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1246C>T
  hgvsp: ENSP00000416801.2:p.Arg416Trp
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2197C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*979C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1246C>T
  hgvsp: ENSP00000337797.5:p.Arg416Trp
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14096
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg416Trp
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

11-802021-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802021
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802021
    reference: chr 11
allele count: 1
allele frequency: 1.622270529833555e-5
allele num: 61642
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2197C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*979C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.66C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1261C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1246C>G
  hgvsp: ENSP00000337797.5:p.Arg416Gly
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1246C>G
  hgvsp: ENSP00000416801.2:p.Arg416Gly
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2161C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.396C>G
  hgvsp: ENSP00000435008.1:p.Arg133Gly
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg416Gly
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

11-802028-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802028
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802028
    reference: chr 11
allele count: 9
allele frequency: 1.484413656605641e-4
allele num: 60630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.389C>T
  hgvsp: ENST00000531286.1:c.389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1239C>T
  hgvsp: ENST00000411829.2:c.1239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*972C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1239C>T
  hgvsp: ENST00000347755.5:c.1239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1254C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2154C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.59C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2190C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8309
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14721
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val413Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-802035-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802035
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802035
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 57110
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1247T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2183T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1232T>G
  hgvsp: ENSP00000337797.5:p.Val411Gly
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*965T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1232T>G
  hgvsp: ENSP00000416801.2:p.Val411Gly
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.382T>G
  hgvsp: ENSP00000435008.1:p.Val128Gly
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.52T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2147T>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24456
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val411Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

11-802035-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802035
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802035
    reference: chr 11
allele count: 2
allele frequency: 3.502013657853266e-5
allele num: 57110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2183T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.382T>C
  hgvsp: ENSP00000435008.1:p.Val128Ala
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2147T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*965T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.52T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1232T>C
  hgvsp: ENSP00000416801.2:p.Val411Ala
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1232T>C
  hgvsp: ENSP00000337797.5:p.Val411Ala
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1247T>C
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15460
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7361
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val411Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

11-802041-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802041
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802041
    reference: chr 11
allele count: 2
allele frequency: 3.915426781519186e-5
allele num: 51080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.46G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1226G>A
  hgvsp: ENSP00000416801.2:p.Arg409His
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2141G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*959G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1226G>A
  hgvsp: ENSP00000337797.5:p.Arg409His
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1241G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.376G>A
  hgvsp: ENSP00000435008.1:p.Arg126His
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2177G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14422
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24612
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9587
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg409His
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-802042-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802042
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802042
    reference: chr 11
allele count: 4
allele frequency: 8.041170794467674e-5
allele num: 49744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1240C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2140C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.375C>T
  hgvsp: ENSP00000435008.1:p.Arg126Cys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2176C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.45C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1225C>T
  hgvsp: ENSP00000416801.2:p.Arg409Cys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*958C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1225C>T
  hgvsp: ENSP00000337797.5:p.Arg409Cys
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24844
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13973
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4098
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg409Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

11-802046-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802046
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802046
    reference: chr 11
allele count: 1
allele frequency: 2.014260967650969e-5
allele num: 49646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1236C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2136C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1221C>T
  hgvsp: ENST00000347755.5:c.1221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.371C>T
  hgvsp: ENST00000531286.1:c.371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2172C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1221C>T
  hgvsp: ENST00000411829.2:c.1221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.41C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*954C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13605
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2573
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10243
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5628
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg407Arg
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

11-802048-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802048
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802048
    reference: chr 11
allele count: 3
allele frequency: 6.514375054286459e-5
allele num: 46052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1234C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.39C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2134C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*952C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1219C>T
  hgvsp: ENSP00000416801.2:p.Arg407Cys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.369C>T
  hgvsp: ENSP00000435008.1:p.Arg124Cys
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2170C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1219C>T
  hgvsp: ENSP00000337797.5:p.Arg407Cys
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25277
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12791
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11048
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2781
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg407Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

11-802050-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802050
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802050
    reference: chr 11
allele count: 2
allele frequency: 4.474673348845535e-5
allele num: 44696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2132G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.367G>A
  hgvsp: ENSP00000435008.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*950G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2168G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1232G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1217G>A
  hgvsp: ENSP00000416801.2:p.Arg406Gln
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.37G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1217G>A
  hgvsp: ENSP00000337797.5:p.Arg406Gln
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12138
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25488
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg406Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-802051-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802051
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802051
    reference: chr 11
allele count: 4
allele frequency: 8.896005693443644e-5
allele num: 44964
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1216C>T
  hgvsp: ENSP00000337797.5:p.Arg406Trp
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2131C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*949C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.36C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1216C>T
  hgvsp: ENSP00000416801.2:p.Arg406Trp
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.366C>T
  hgvsp: ENSP00000435008.1:p.Arg123Trp
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1231C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2167C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25589
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26454
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3297
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg406Trp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

11-802052-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802052
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802052
    reference: chr 11
allele count: 1
allele frequency: 2.30361667818475e-5
allele num: 43410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*948C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.35C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1230C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.365C>T
  hgvsp: ENST00000531286.1:c.365C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1215C>T
  hgvsp: ENST00000411829.2:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1215C>T
  hgvsp: ENST00000347755.5:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2166C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2130C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11485
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4405
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala405Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-802055-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802055
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802055
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 43252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.362G>C
  hgvsp: ENSP00000435008.1:p.Gln121His
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1227G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.32G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1212G>C
  hgvsp: ENSP00000337797.5:p.Gln404His
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1212G>C
  hgvsp: ENSP00000416801.2:p.Gln404His
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2163G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2127G>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*945G>C
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25949
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11407
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11977
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln404His
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

11-802056-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802056
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802056
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 41562
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1211A>C
  hgvsp: ENSP00000337797.5:p.Gln404Pro
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1226A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2126A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2162A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1211A>C
  hgvsp: ENSP00000416801.2:p.Gln404Pro
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.361A>C
  hgvsp: ENSP00000435008.1:p.Gln121Pro
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.31A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*944A>C
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25997
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4543
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3083
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4986
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln404Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

11-802058-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802058
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802058
    reference: chr 11
allele count: 1
allele frequency: 2.426948839918455e-5
allele num: 41204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2124G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1224G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*942G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.359G>A
  hgvsp: ENST00000531286.1:c.359G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1209G>A
  hgvsp: ENST00000411829.2:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2160G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.29G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1209G>A
  hgvsp: ENST00000347755.5:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11822
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12206
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3624
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Pro403Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

11-802059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802059
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802059
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 41150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.358C>T
  hgvsp: ENSP00000435008.1:p.Pro120Leu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*941C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2159C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2123C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.28C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1208C>T
  hgvsp: ENSP00000416801.2:p.Pro403Leu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1208C>T
  hgvsp: ENSP00000337797.5:p.Pro403Leu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1223C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26279
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11991
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3131
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12421
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5235
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro403Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

11-802060-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802060
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802060
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 40934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*940C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.357C>T
  hgvsp: ENSP00000435008.1:p.Pro120Ser
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.27C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2122C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1207C>T
  hgvsp: ENSP00000337797.5:p.Pro403Ser
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1207C>T
  hgvsp: ENSP00000416801.2:p.Pro403Ser
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1222C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2158C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 10205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26301
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro403Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

11-802061-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802061
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802061
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 40498
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2157A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*939A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.26A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1206A>C
  hgvsp: ENST00000347755.5:c.1206A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1206A>C
  hgvsp: ENST00000411829.2:c.1206A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2121A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.356A>C
  hgvsp: ENST00000531286.1:c.356A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1221A>C
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26366
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5257
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26042
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2913
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro402Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP

11-802062-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802062
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802062
    reference: chr 11
allele count: 1
allele frequency: 2.473777953690877e-5
allele num: 40424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*938C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2120C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.355C>T
  hgvsp: ENSP00000435008.1:p.Pro119Leu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.25C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1205C>T
  hgvsp: ENSP00000337797.5:p.Pro402Leu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1205C>T
  hgvsp: ENSP00000416801.2:p.Pro402Leu
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2156C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1220C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12480
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9991
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12739
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25984
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro402Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

11-802065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802065
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802065
    reference: chr 11
allele count: 1
allele frequency: 2.511553144464537e-5
allele num: 39816
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1202C>T
  hgvsp: ENSP00000337797.5:p.Thr401Ile
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1217C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1202C>T
  hgvsp: ENSP00000416801.2:p.Thr401Ile
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.352C>T
  hgvsp: ENSP00000435008.1:p.Thr118Ile
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.22C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*935C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2117C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2153C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12789
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1620
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr401Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

11-802070-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802070
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802070
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 39214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*930C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2112C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.17C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1197C>G
  hgvsp: ENST00000347755.5:c.1197C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2148C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1212C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1197C>G
  hgvsp: ENST00000411829.2:c.1197C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.347C>G
  hgvsp: ENST00000531286.1:c.347C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26202
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu399Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-802072-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802072
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802072
    reference: chr 11
allele count: 24
allele frequency: 6.309811757282574e-4
allele num: 38036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.345C>G
  hgvsp: ENSP00000435008.1:p.Leu116Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527812
  gene symbol: PIDD
  hgvsc: ENST00000527812.1:n.15C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1210C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2110C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1195C>G
  hgvsp: ENSP00000337797.5:p.Leu399Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1195C>G
  hgvsp: ENSP00000416801.2:p.Leu399Val
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2146C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*928C>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 13364
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26088
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9485
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2827
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 2.5e0
  variant carriers: 2
hgvs: p.Leu399Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

11-802087-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802087
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802087
    reference: chr 11
allele count: 1
allele frequency: 2.598617535471129e-5
allele num: 38482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*913G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1180G>A
  hgvsp: ENSP00000337797.5:p.Val394Met
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1180G>A
  hgvsp: ENSP00000416801.2:p.Val394Met
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2131G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1195G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2095G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.330G>A
  hgvsp: ENSP00000435008.1:p.Val111Met
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13939
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14430
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2903
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val394Met
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-802091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802091
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802091
    reference: chr 11
allele count: 2
allele frequency: 5.24493863421798e-5
allele num: 38132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-1G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-1G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-1G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-1G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-1G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-1G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-1G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24591
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5089
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1177-1G>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

11-802093-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802093
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802094
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 37808
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-4dupG
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-4dupG
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-4dupG
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-4dupG
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-4dupG
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-4dupG
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-4dupG
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25971
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15042
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1533
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23471
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3325
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1177-4dupG
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

11-802106-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802106
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802106
    reference: chr 11
allele count: 17
allele frequency: 4.60479982664283e-4
allele num: 36918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-16C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-16C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-16C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-16C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-16C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-16C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-16C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13491
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8578
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26546
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4241
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4680
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20487
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

11-802111-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802111
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802111
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 35924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-21C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-21C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-21C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-21C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-21C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-21C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-21C>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12959
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26734
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5537
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3791
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15402
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/11-802114-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802114
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802114
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 34504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-24G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-24G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-24G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-24G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-24G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-24G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-24G>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26532
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13460
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9540
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5705
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

11-802114-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802114
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802114
    reference: chr 11
allele count: 2
allele frequency: 5.796429399489914e-5
allele num: 34504
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-24G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-24G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-24G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-24G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-24G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-24G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-24G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26532
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5705
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14720
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9540
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-802115-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802115
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802115
    reference: chr 11
allele count: 25095
allele frequency: 6.05369807497467e-1
allele num: 41454
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-25T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-25T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-25T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-25T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-25T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-25T>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-25T>C
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.25e1
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.25e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 530
genotype depth: GenotypeDepth
  all individuals: 9777
  bin: 2.5e0
  variant carriers: 6096
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 1.25e1
  variant carriers: 8880
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.75e1
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 566
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 2.25e1
  variant carriers: 839
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 1.75e1
  variant carriers: 2339
genotype depth: GenotypeDepth
  all individuals: 25102
  bin: 7.5e0
  variant carriers: 17649
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 3.25e1
  variant carriers: 481
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.25e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.75e1
  variant carriers: 451
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 474
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 2.75e1
  variant carriers: 588
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 509
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 8.75e1
  variant carriers: 765
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 2.75e1
  variant carriers: 2151
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 9.25e1
  variant carriers: 660
genotype quality: GenotypeQuality
  all individuals: 6587
  bin: 2.5e0
  variant carriers: 252
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 5.75e1
  variant carriers: 451
genotype quality: GenotypeQuality
  all individuals: 12485
  bin: 9.75e1
  variant carriers: 12387
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 7.5e0
  variant carriers: 1828
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 7.75e1
  variant carriers: 578
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 1.25e1
  variant carriers: 2694
genotype quality: GenotypeQuality
  all individuals: 6383
  bin: 1.75e1
  variant carriers: 5589
num of homozygotes: 7537
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-802116-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802116
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802116
    reference: chr 11
allele count: 1
allele frequency: 2.656042496679947e-5
allele num: 37650
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-26G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-26G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-26G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-26G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-26G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-26G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-26G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14666
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16006
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3846
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

11-802117-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802117
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802117
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 37374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-27A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-27A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-27A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-27A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-27A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-27A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-27A>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14686
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24422
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6675
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16019
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3845
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13794
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

11-802117-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802117
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802117
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 37374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-27A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-27A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-27A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-27A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-27A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-27A>C
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-27A>C
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14686
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2405
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6675
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13794
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6837
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: FS

11-802118-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802118
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802118
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 37212
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-28C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-28C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-28C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-28C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-28C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-28C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-28C>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14729
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3845
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13824
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6779
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16159
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

11-802119-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802119
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802119
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 36702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-29C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-29C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-29C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-29C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-29C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-29C>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-29C>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14681
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6932
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7272
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13058
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16008
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-802120-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802120
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802120
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 35368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-30T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-30T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-30T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-30T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-30T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-30T>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-30T>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 8700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14560
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3845
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8817
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15644
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

11-802125-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802125
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802125
    reference: chr 11
allele count: 36430
allele frequency: 9.49340699431907e-1
allele num: 38374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-35A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-35A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-35A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-35A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-35A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-35A>G
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-35A>G
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 6.25e1
  variant carriers: 573
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.75e1
  variant carriers: 592
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 240
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 475
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.25e1
  variant carriers: 884
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 626
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.25e1
  variant carriers: 405
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 1.75e1
  variant carriers: 2256
genotype depth: GenotypeDepth
  all individuals: 24058
  bin: 7.5e0
  variant carriers: 23461
genotype depth: GenotypeDepth
  all individuals: 11299
  bin: 2.5e0
  variant carriers: 10910
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 591
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 1.25e1
  variant carriers: 9223
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 633
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 4.75e1
  variant carriers: 669
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.25e1
  variant carriers: 541
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.75e1
  variant carriers: 328
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.25e1
  variant carriers: 669
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 8.75e1
  variant carriers: 239
genotype quality: GenotypeQuality
  all individuals: 3664
  bin: 3.75e1
  variant carriers: 3663
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 2.5e0
  variant carriers: 263
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 5.75e1
  variant carriers: 514
genotype quality: GenotypeQuality
  all individuals: 8200
  bin: 9.75e1
  variant carriers: 8199
genotype quality: GenotypeQuality
  all individuals: 4209
  bin: 1.25e1
  variant carriers: 4186
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 2.75e1
  variant carriers: 3869
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 275
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.25e1
  variant carriers: 300
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 5.25e1
  variant carriers: 1077
num of homozygotes: 17290
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

11-802126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802126
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802126
    reference: chr 11
allele count: 3
allele frequency: 9.881422924901186e-5
allele num: 30360
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-36C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-36C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-36C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-36C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-36C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-36C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-36C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17522
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7143
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10717
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-802129-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802129
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802129
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 30054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-39G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-39G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-39G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-39G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-39G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-39G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-39G>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18103
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7331
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7256
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

11-802129-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802129
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802129
    reference: chr 11
allele count: 2
allele frequency: 6.654688227856525e-5
allele num: 30054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-39G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-39G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-39G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-39G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-39G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-39G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-39G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18103
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4818
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17219
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12072
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

11-802130-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802130
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802130
    reference: chr 11
allele count: 3
allele frequency: 9.911457645037664e-5
allele num: 30268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-40C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-40C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-40C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-40C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-40C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-40C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-40C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4818
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

11-802132-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802132
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802132
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 29738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-42C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-42C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-42C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-42C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-42C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-42C>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-42C>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18503
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17516
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6372
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7233
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/11-802133-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802133
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802133
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 29514
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-43G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-43G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-43G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-43G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-43G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-43G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-43G>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18574
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4817
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17526
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7262
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-802135-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802135
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802135
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 28862
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-45G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-45G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-45G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-45G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-45G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-45G>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-45G>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24555
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18686
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7249
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12616
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

11-802135-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802135
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802135
    reference: chr 11
allele count: 2
allele frequency: 6.92952671332548e-5
allele num: 28862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-45G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-45G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-45G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-45G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-45G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-45G>A
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-45G>A
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18686
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24555
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12616
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6752
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7249
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

11-802136-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802136
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802136
    reference: chr 11
allele count: 2
allele frequency: 6.990562740300595e-5
allele num: 28610
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  hgvsc: ENST00000524486.1:c.*1192-46C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  hgvsc: ENST00000534525.1:n.2128-46C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  hgvsc: ENST00000525028.2:c.*910-46C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  hgvsc: ENST00000527357.1:n.2092-46C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  hgvsc: ENST00000411829.2:c.1177-46C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  hgvsc: ENST00000347755.5:c.1177-46C>T
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  hgvsc: ENST00000531286.1:c.327-46C>T
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24644
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18657
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4826
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13132
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

11-802136-GCACACTGCCCCTGCCATGCCCTGGCCCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 802136
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 802108
    reference: chr 11
allele count: 2
allele frequency: 6.990562740300595e-5
allele num: 28610
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436342
  ensembl transcript: ENST00000525028
  gene symbol: PIDD
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000416801
  ensembl transcript: ENST00000411829
  gene symbol: PIDD
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000435008
  ensembl transcript: ENST00000531286
  gene symbol: PIDD
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000534525
  gene symbol: PIDD
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000337797
  ensembl transcript: ENST00000347755
  gene symbol: PIDD
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl transcript: ENST00000527357
  gene symbol: PIDD
  variant of: http://identifiers.org/hgnc/16491
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177595
  ensembl protein: ENSP00000436146
  ensembl transcript: ENST00000524486
  gene symbol: PIDD
  variant of: http://identifiers.org/hgnc/16491
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24644
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7057
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4826
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: GCACACTGCCCCTGCCATGCCCTGGCCCA

GenotypeQuality
all individuals: 1301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1264
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

South Asian
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num of homozygotes: 0

InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 1430
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 2.557544757033248e-3
allele num: 782
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South Asian
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FS
type: SiteQuality
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.801120448179272e-5
allele num: 35700
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

QD
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SIO_000300: 4.14e0

ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

FS
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SIO_000300: 1.922e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.109e0

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5246
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6700
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2290
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 35468
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.739e1

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

FS
type: SiteQuality
SIO_000300: 4.676e0

VQSLOD
type: SiteQuality
SIO_000300: -2.365e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 2.113e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5218
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2224
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.867794665901921e-5
allele num: 34870
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.43575e5

MQ
type: SiteQuality
SIO_000300: 5.811e1

FS
type: SiteQuality
SIO_000300: 2.606e0

ClippingRankSum
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.23e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.501e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 34648
num of homozygotes: 0

South Asian
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allele frequency: 9.821253191907288e-5
allele num: 10182
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East Asian
type: Population
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allele frequency: 8.710801393728223e-3
allele num: 5166
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African
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 1
allele frequency: 1.529519730804527e-4
allele num: 6538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
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MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
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VQSLOD
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
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allele num: 2146
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South Asian
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East Asian
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Latino
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allele frequency: 1.539408866995074e-4
allele num: 6496
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele num: 5654
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Other
type: Population
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allele num: 450
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QD
type: SiteQuality
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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MQ
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 432
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South Asian
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African
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allele num: 5384
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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allele num: 33576
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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QD
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BaseQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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allele num: 5336
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Latino
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European (Non-Finnish)
type: Population
allele count: 1
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allele num: 33202
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Other
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European (Finnish)
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QD
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.77e-1

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4653
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 441
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7203
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.07053967097675e-5
allele num: 32946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.06e-1

QD
type: SiteQuality
SIO_000300: 1.165e1

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.17e-2

FS
type: SiteQuality
SIO_000300: 1.038e0

DP
type: SiteQuality
SIO_000300: 7.46037e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

GenotypeQuality
all individuals: 6978
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4077
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.051571559353067e-5
allele num: 32770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1816
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.372e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.17e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.704e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.678e0

MQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

FS
type: SiteQuality
SIO_000300: 2.081e0

DP
type: SiteQuality
SIO_000300: 7.5293e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 3886
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.419743782969103e-5
allele num: 10616
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.13e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e0

VQSLOD
type: SiteQuality
SIO_000300: -3.42e-2

QD
type: SiteQuality
SIO_000300: 1.042e1

FS
type: SiteQuality
SIO_000300: 8.247999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.67878e5

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

GenotypeQuality
all individuals: 1448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
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variant carriers: 0

GenotypeQuality
all individuals: 1853
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3790
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variant carriers: 0

GenotypeQuality
all individuals: 179
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variant carriers: 2

GenotypeQuality
all individuals: 9296
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variant carriers: 0

GenotypeQuality
all individuals: 269
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variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 540
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variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 461
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33304
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 2.487562189054726e-3
allele num: 6030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

DP
type: SiteQuality
SIO_000300: 7.7696e5

FS
type: SiteQuality
SIO_000300: 7.873e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.167e1

VQSLOD
type: SiteQuality
SIO_000300: 4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
all individuals: 10757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
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variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
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variant carriers: 0

GenotypeQuality
all individuals: 246
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GenotypeQuality
all individuals: 3103
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variant carriers: 0

GenotypeQuality
all individuals: 370
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variant carriers: 0

GenotypeQuality
all individuals: 437
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variant carriers: 0

GenotypeQuality
all individuals: 470
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variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5970
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.185606734246251e-4
allele num: 33738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10838
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.05e-1

QD
type: SiteQuality
SIO_000300: 2.841e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.324e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

FS
type: SiteQuality
SIO_000300: 2.157e0

DP
type: SiteQuality
SIO_000300: 7.96478e5

GenotypeQuality
all individuals: 3381
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3028
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
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variant carriers: 1

GenotypeQuality
all individuals: 657
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
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variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 640
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variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.958754955914551e-5
allele num: 33798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.98532e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.4e-1

QD
type: SiteQuality
SIO_000300: 2.438e1

FS
type: SiteQuality
SIO_000300: 6.632e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.110000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

GenotypeQuality
all individuals: 3315
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
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variant carriers: 2

GenotypeQuality
all individuals: 2934
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 445
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11072
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.953337271116362e-5
allele num: 33860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.764976958525346e-4
allele num: 10850
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 8.02949e5

QD
type: SiteQuality
SIO_000300: 1.606e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.034e0

FS
type: SiteQuality
SIO_000300: 3.312e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.99e-1

GenotypeQuality
all individuals: 644
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 2899
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GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
all individuals: 654
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variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3292
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
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GenotypeQuality
all individuals: 562
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GenotypeQuality
all individuals: 579
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.843296781039972e-5
allele num: 33924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.779359430604982e-4
allele num: 5620
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.185e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

FS
type: SiteQuality
SIO_000300: 7.627e0

QD
type: SiteQuality
SIO_000300: 1.396e1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e-1

DP
type: SiteQuality
SIO_000300: 8.04559e5

GenotypeQuality
all individuals: 31008
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 5.25e1
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GenotypeQuality
all individuals: 1593
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variant carriers: 0

GenotypeQuality
all individuals: 577
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variant carriers: 1

GenotypeQuality
all individuals: 12626
bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 323
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GenotypeQuality
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GenotypeQuality
all individuals: 2559
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GenotypeQuality
all individuals: 217
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GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.915451895043732e-5
allele num: 34300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5042
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

QD
type: SiteQuality
SIO_000300: 2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

VQSLOD
type: SiteQuality
SIO_000300: -2.83e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.17502e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

GenotypeQuality
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3025
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 671
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1920
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10928
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.856515373352855e-5
allele num: 34150
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.675e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.247e1

DP
type: SiteQuality
SIO_000300: 8.15479e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2949
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2747
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1622
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5032
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1940
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.120758847136082e-5
allele num: 10964
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.408e0

VQSLOD
type: SiteQuality
SIO_000300: -1.411e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

QD
type: SiteQuality
SIO_000300: 4.71e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 8.18039e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 565
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3126
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 514
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1938
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 7.047216349541931e-4
allele num: 5676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10940
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.14484e5

FS
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 1.387e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.58e0

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 175
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11605
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2658
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 578
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variant carriers: 1

GenotypeQuality
all individuals: 244
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variant carriers: 0

GenotypeQuality
all individuals: 267
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variant carriers: 0

GenotypeQuality
all individuals: 375
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.149130832570906e-5
allele num: 10930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.953e0

DP
type: SiteQuality
SIO_000300: 8.1044e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

FS
type: SiteQuality
SIO_000300: 4.053e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.535e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 3.241e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

GenotypeQuality
all individuals: 1980
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1588
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variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
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variant carriers: 0

GenotypeQuality
all individuals: 370
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variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 470
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.960185957801883e-5
allele num: 33556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4956
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10882
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

MQ
type: SiteQuality
SIO_000300: 5.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.885e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 7.94761e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

QD
type: SiteQuality
SIO_000300: 6.23e0

GenotypeQuality
all individuals: 1359
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 700
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variant carriers: 0

GenotypeQuality
all individuals: 582
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
all individuals: 181
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variant carriers: 0

GenotypeQuality
all individuals: 354
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 371
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variant carriers: 0

GenotypeQuality
all individuals: 2616
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.066115702479339e-4
allele num: 4840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 9.126308104161596e-5
allele num: 32872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10800
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 2.196e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-1

DP
type: SiteQuality
SIO_000300: 7.85953e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

QD
type: SiteQuality
SIO_000300: 9.27e0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
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variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.758087201125176e-4
allele num: 5688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.072751563733528e-5
allele num: 32934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5174
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.039999999999999e0

DP
type: SiteQuality
SIO_000300: 7.85961e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.506e-1

FS
type: SiteQuality
SIO_000300: 1.0119e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
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GenotypeQuality
all individuals: 10492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
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GenotypeQuality
all individuals: 181
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variant carriers: 0

GenotypeQuality
all individuals: 175
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GenotypeQuality
all individuals: 1822
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.24898261191269e-5
allele num: 10812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5174
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

FS
type: SiteQuality
SIO_000300: 1.0119e1

QD
type: SiteQuality
SIO_000300: 8.039999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -4.506e-1

DP
type: SiteQuality
SIO_000300: 7.85961e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.24e-1

GenotypeQuality
all individuals: 749
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 1808
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variant carriers: 0

GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
all individuals: 5028
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 648
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1528
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variant carriers: 0

GenotypeQuality
all individuals: 551
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variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.095975232198142e-5
allele num: 32300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1790
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 7.403294466037387e-4
allele num: 10806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4740
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.863e0

DP
type: SiteQuality
SIO_000300: 7.67511e5

MQRankSum
type: SiteQuality
SIO_000300: 3.73e-1

FS
type: SiteQuality
SIO_000300: 5.87e0

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

GenotypeQuality
all individuals: 532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1925
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5372
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.51e-2

FS
type: SiteQuality
SIO_000300: 2.017e0

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

MQ
type: SiteQuality
SIO_000300: 5.739e1

DP
type: SiteQuality
SIO_000300: 7.2503e5

VQSLOD
type: SiteQuality
SIO_000300: -5.023e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.006e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 175
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 4.49842555105713e-4
allele num: 4446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.006e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

FS
type: SiteQuality
SIO_000300: 2.017e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.51e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.023e-1

MQ
type: SiteQuality
SIO_000300: 5.739e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 7.2503e5

GenotypeQuality
all individuals: 2631
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 525
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variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1108
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.516356316054353e-4
allele num: 3974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.718854592785422e-5
allele num: 26890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3670
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.33e-1

DP
type: SiteQuality
SIO_000300: 6.87032e5

FS
type: SiteQuality
SIO_000300: 3.945e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.073e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.17e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.44e-1

GenotypeQuality
all individuals: 27271
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.14828140549644e-4
allele num: 26126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1022
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.840909090909091e-4
allele num: 3520
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

DP
type: SiteQuality
SIO_000300: 6.80267e5

FS
type: SiteQuality
SIO_000300: 7.558e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.522e-1

QD
type: SiteQuality
SIO_000300: 9.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
all individuals: 191
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 175
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 719
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variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.838476892369108e-5
allele num: 26052
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.23e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

DP
type: SiteQuality
SIO_000300: 6.71865e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.1e-2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.181650915781551e-5
allele num: 23914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4462
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.018570851836899e-4
allele num: 9908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.48e-2

FS
type: SiteQuality
SIO_000300: 6.422e0

DP
type: SiteQuality
SIO_000300: 6.56201e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.242e-1

GenotypeQuality
all individuals: 2406
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 519
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9824
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.295684113865932e-4
allele num: 4356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.323015735777279e-5
allele num: 23132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.929999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

DP
type: SiteQuality
SIO_000300: 6.47928e5

MQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.54e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.98e-1

QD
type: SiteQuality
SIO_000300: 1.092e1

GenotypeQuality
all individuals: 674
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 144
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GenotypeQuality
all individuals: 39
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variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.29331959471063e-5
allele num: 23292
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.836074872376631e-4
allele num: 3526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.520795660036166e-4
allele num: 4424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.407e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.53e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.101e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

FS
type: SiteQuality
SIO_000300: 1.6608e1

DP
type: SiteQuality
SIO_000300: 6.46834e5

GenotypeQuality
all individuals: 631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 937
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11796
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GenotypeQuality
all individuals: 3041
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GenotypeQuality
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GenotypeQuality
all individuals: 584
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GenotypeQuality
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GenotypeQuality
all individuals: 5089
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2632
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3440
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.318034306907742e-4
allele num: 4314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

QD
type: SiteQuality
SIO_000300: 9.93e0

MQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

DP
type: SiteQuality
SIO_000300: 6.3795e5

VQSLOD
type: SiteQuality
SIO_000300: 1.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.52e-2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4300
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.34365e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 6.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.151e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2398
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.68e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.05e-1

DP
type: SiteQuality
SIO_000300: 6.28079e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.59e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3262
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4116
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.761451290353299e-5
allele num: 21002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.823e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.72e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

QD
type: SiteQuality
SIO_000300: 7.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 1.685e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

DP
type: SiteQuality
SIO_000300: 6.27196e5

GenotypeQuality
all individuals: 638
bin: 7.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.391e1

FS
type: SiteQuality
SIO_000300: 1.204e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.67e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.47e-1

DP
type: SiteQuality
SIO_000300: 6.24713e5

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3252
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQ
type: SiteQuality
SIO_000300: 5.516e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.386e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.638e0

DP
type: SiteQuality
SIO_000300: 6.21173e5

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 20564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2262
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.21471e5

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4122
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.874244492103724e-5
allele num: 20516
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.64e-2

QD
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 3.188775510204081e-4
allele num: 3136
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 20220
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.67e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.09696e5

QD
type: SiteQuality
SIO_000300: 7.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

GenotypeQuality
all individuals: 558
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 12917
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4889
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 24559
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 625
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1229
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2117
bin: 2.75e1
variant carriers: 8

African
type: Population
allele count: 13
allele frequency: 3.492745835572273e-3
allele num: 3722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 5.763386775647072e-4
allele num: 19086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1980
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.149e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 6.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

FS
type: SiteQuality
SIO_000300: 5.5227e1

DP
type: SiteQuality
SIO_000300: 6.07948e5

MQ
type: SiteQuality
SIO_000300: 5.7e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.339e0

VQSLOD
type: SiteQuality
SIO_000300: -1.594e1

GenotypeQuality
all individuals: 5163
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 525
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1734
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.463054187192118e-4
allele num: 4060
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.236e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.427e0

DP
type: SiteQuality
SIO_000300: 6.07127e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.79e-2

MQ
type: SiteQuality
SIO_000300: 5.933e1

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.05e-1

QD
type: SiteQuality
SIO_000300: 8.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.54e-1

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14802
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.034340091021928e-4
allele num: 19336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9368
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.855e1

VQSLOD
type: SiteQuality
SIO_000300: -2.089e0

DP
type: SiteQuality
SIO_000300: 6.03981e5

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.88e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

FS
type: SiteQuality
SIO_000300: 9.330000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

QD
type: SiteQuality
SIO_000300: 9.69e0

GenotypeQuality
all individuals: 2070
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3488
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19140
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.00931e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.97e-2

QD
type: SiteQuality
SIO_000300: 8.34e0

GenotypeQuality
all individuals: 650
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 15727
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3991
bin: 1.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.702412868632708e-4
allele num: 1492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 8.562560205501445e-4
allele num: 18686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2718
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.331e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.95e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

DP
type: SiteQuality
SIO_000300: 5.90597e5

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 636
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6636
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16671
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 2.887e1

FS
type: SiteQuality
SIO_000300: 1.342e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.777e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.04e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 5.87986e5

GenotypeQuality
all individuals: 333
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14720
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1300
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.265e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

DP
type: SiteQuality
SIO_000300: 5.89326e5

MQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

MQ
type: SiteQuality
SIO_000300: 5.604e1

QD
type: SiteQuality
SIO_000300: 1.36e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1374
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 315
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 13460
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 333
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 497
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.75178866263071e-4
allele num: 3634
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.088139281828074e-4
allele num: 9190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17310
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 4.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.265e-1

QD
type: SiteQuality
SIO_000300: 1.36e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQ
type: SiteQuality
SIO_000300: 5.604e1

DP
type: SiteQuality
SIO_000300: 5.89326e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 958
bin: 4.75e1
variant carriers: 905

GenotypeQuality
all individuals: 7468
bin: 2.25e1
variant carriers: 5168

GenotypeQuality
all individuals: 1913
bin: 3.75e1
variant carriers: 1792

GenotypeQuality
all individuals: 773
bin: 8.25e1
variant carriers: 692

GenotypeQuality
all individuals: 1336
bin: 6.25e1
variant carriers: 477

GenotypeQuality
all individuals: 723
bin: 5.25e1
variant carriers: 700

GenotypeQuality
all individuals: 3156
bin: 3.25e1
variant carriers: 2880

GenotypeQuality
all individuals: 726
bin: 4.25e1
variant carriers: 682

GenotypeQuality
all individuals: 690
bin: 6.75e1
variant carriers: 417

GenotypeQuality
all individuals: 484
bin: 7.25e1
variant carriers: 367

East Asian
type: Population
allele count: 1654
allele frequency: 5.988414192614048e-1
allele num: 2762
num of homozygotes: 492

European (Non-Finnish)
type: Population
allele count: 13837
allele frequency: 6.345501238191323e-1
allele num: 21806
num of homozygotes: 4248

Latino
type: Population
allele count: 1396
allele frequency: 7.409766454352441e-1
allele num: 1884
num of homozygotes: 505

South Asian
type: Population
allele count: 4693
allele frequency: 4.783893985728848e-1
allele num: 9810
num of homozygotes: 1124

European (Finnish)
type: Population
allele count: 419
allele frequency: 6.235119047619048e-1
allele num: 672
num of homozygotes: 117

Other
type: Population
allele count: 174
allele frequency: 5.918367346938775e-1
allele num: 294
num of homozygotes: 46

African
type: Population
allele count: 2922
allele frequency: 6.914339801230478e-1
allele num: 4226
num of homozygotes: 1005

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.042e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.441e-1

DP
type: SiteQuality
SIO_000300: 7.50062e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

QD
type: SiteQuality
SIO_000300: 2.926e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1518
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.130309870716191e-5
allele num: 19492
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

MQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.352e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.01e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

VQSLOD
type: SiteQuality
SIO_000300: -2.622e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3802
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2376
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 19354
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

QD
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SIO_000300: 1.729e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.905e1

DP
type: SiteQuality
SIO_000300: 6.94986e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.91e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 1066
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 19354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3802
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.91e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.294e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

DP
type: SiteQuality
SIO_000300: 6.94986e5

QD
type: SiteQuality
SIO_000300: 1.729e1

MQ
type: SiteQuality
SIO_000300: 5.905e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2387
bin: 2.75e1
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GenotypeQuality
all individuals: 1430
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3830
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.71e0

DP
type: SiteQuality
SIO_000300: 6.94396e5

GenotypeQuality
all individuals: 1321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2432
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GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1440
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.93153e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.81e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.435e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.613e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7115
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 162
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GenotypeQuality
all individuals: 1107
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GenotypeQuality
all individuals: 302
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variant carriers: 0

GenotypeQuality
all individuals: 11402
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GenotypeQuality
all individuals: 358
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2204
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.18e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.324e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

DP
type: SiteQuality
SIO_000300: 6.91004e5

VQSLOD
type: SiteQuality
SIO_000300: -1.628e0

GenotypeQuality
all individuals: 333
bin: 7.75e1
variant carriers: 330

GenotypeQuality
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bin: 7.5e0
variant carriers: 3592

GenotypeQuality
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bin: 4.75e1
variant carriers: 1705

GenotypeQuality
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variant carriers: 8622

GenotypeQuality
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variant carriers: 5716

GenotypeQuality
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variant carriers: 188

GenotypeQuality
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variant carriers: 537

GenotypeQuality
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bin: 4.25e1
variant carriers: 1355

GenotypeQuality
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variant carriers: 8625

GenotypeQuality
all individuals: 382
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variant carriers: 377

South Asian
type: Population
allele count: 9214
allele frequency: 9.375254375254375e-1
allele num: 9828
num of homozygotes: 4323

European (Finnish)
type: Population
allele count: 610
allele frequency: 9.561128526645768e-1
allele num: 638
num of homozygotes: 291

African
type: Population
allele count: 3492
allele frequency: 9.084287200832466e-1
allele num: 3844
num of homozygotes: 1583

East Asian
type: Population
allele count: 2348
allele frequency: 9.982993197278912e-1
allele num: 2352
num of homozygotes: 1172

Latino
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allele count: 1503
allele frequency: 9.646983311938383e-1
allele num: 1558
num of homozygotes: 726

European (Non-Finnish)
type: Population
allele count: 19003
allele frequency: 9.557891560205211e-1
allele num: 19882
num of homozygotes: 9071

Other
type: Population
allele count: 260
allele frequency: 9.558823529411765e-1
allele num: 272
num of homozygotes: 124

FS
type: SiteQuality
SIO_000300: 1.094e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

DP
type: SiteQuality
SIO_000300: 7.56113e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.24e-2

QD
type: SiteQuality
SIO_000300: 2.72e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.700616456714018e-5
allele num: 14924
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9254
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 6.724949562878278e-4
allele num: 2974
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

FS
type: SiteQuality
SIO_000300: 4.684e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 6.99208e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.12e-2

GenotypeQuality
all individuals: 588
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4818
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GenotypeQuality
all individuals: 282
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQ
type: SiteQuality
SIO_000300: 5.696e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.16e-2

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 6.95918e5

QD
type: SiteQuality
SIO_000300: 9.34e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7256
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GenotypeQuality
all individuals: 588
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GenotypeQuality
all individuals: 232
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.561679790026247e-4
allele num: 1524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.772314777190844e-5
allele num: 14766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 940
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.34e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.069e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.16e-2

MQ
type: SiteQuality
SIO_000300: 5.696e1

DP
type: SiteQuality
SIO_000300: 6.95918e5

GenotypeQuality
all individuals: 7166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17563
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1938
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6266
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.167316861725184e-4
allele num: 9228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.713211600429645e-5
allele num: 14896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

QD
type: SiteQuality
SIO_000300: 1.025e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.62e-2

FS
type: SiteQuality
SIO_000300: 4.702e0

VQSLOD
type: SiteQuality
SIO_000300: -1.392e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

DP
type: SiteQuality
SIO_000300: 6.96059e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.49e-1

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4818
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13016
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 920
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.618e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 6.93392e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.67e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 12914
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6491
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.69e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.959e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.447e0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

DP
type: SiteQuality
SIO_000300: 6.92888e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6752
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4822
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 2.91e1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.36e-2

FS
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.862e1

DP
type: SiteQuality
SIO_000300: 6.92272e5

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4822
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 227
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.140816909454442e-5
allele num: 14004
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9146
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.36e-2

QD
type: SiteQuality
SIO_000300: 2.91e1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 5.862e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 6.92272e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 17457
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7057
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6110
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1912
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9106
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.443209698369173e-4
allele num: 13858
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

QD
type: SiteQuality
SIO_000300: 3.86e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.749999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 6.93218e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

GenotypeQuality
all individuals: 17457
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1410
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.625815808556925e-4
allele num: 2758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.216048491845865e-5
allele num: 13858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9106
num of homozygotes: 0