13-113739259-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739259
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739259
    reference: chr 13
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2109G>A
  hgvsp: ENST00000423482.2:c.2109G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2214G>A
  hgvsp: ENST00000397030.1:c.2214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2109G>A
  hgvsp: ENST00000375597.4:c.2109G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1096G>A
  hgvsp: ENST00000397017.2:c.1096G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2127G>A
  hgvsp: ENST00000421756.1:c.2127G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2127G>A
  hgvsp: ENST00000375601.3:c.2127G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.379G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2205G>A
  hgvsp: ENST00000442652.2:c.2205G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2286G>A
  hgvsp: ENST00000375604.2:c.2286G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2133G>A
  hgvsp: ENST00000434480.2:c.2133G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2115G>A
  hgvsp: ENST00000535094.2:c.2115G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2205G>A
  hgvsp: ENST00000375608.3:c.2205G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23009
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu705Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

13-113739262-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739262
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739262
    reference: chr 13
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2130C>T
  hgvsp: ENST00000421756.1:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1099C>T
  hgvsp: ENST00000397017.2:c.1099C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2130C>T
  hgvsp: ENST00000375601.3:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2136C>T
  hgvsp: ENST00000434480.2:c.2136C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2289C>T
  hgvsp: ENST00000375604.2:c.2289C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2118C>T
  hgvsp: ENST00000535094.2:c.2118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2112C>T
  hgvsp: ENST00000423482.2:c.2112C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2208C>T
  hgvsp: ENST00000375608.3:c.2208C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2208C>T
  hgvsp: ENST00000442652.2:c.2208C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2112C>T
  hgvsp: ENST00000375597.4:c.2112C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.382C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2217C>T
  hgvsp: ENST00000397030.1:c.2217C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser706Ser
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

13-113739276-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739276
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739276
    reference: chr 13
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2222G>T
  hgvsp: ENSP00000401422.2:p.Cys741Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2231G>T
  hgvsp: ENSP00000380225.1:p.Cys744Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2222G>T
  hgvsp: ENSP00000364758.3:p.Cys741Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2132G>T
  hgvsp: ENSP00000440374.2:p.Cys711Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2303G>T
  hgvsp: ENSP00000364754.2:p.Cys768Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1113G>T
  hgvsp: ENSP00000380212.2:p.Cys372Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.396G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2126G>T
  hgvsp: ENSP00000405639.2:p.Cys709Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2150G>T
  hgvsp: ENSP00000407722.2:p.Cys717Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2144G>T
  hgvsp: ENSP00000397285.1:p.Cys715Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2144G>T
  hgvsp: ENSP00000364751.3:p.Cys715Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2126G>T
  hgvsp: ENSP00000364747.4:p.Cys709Phe
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23007
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys711Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

13-113739280-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739280
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739280
    reference: chr 13
allele count: 22
allele frequency: 1.815001815001815e-4
allele num: 121212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2226C>T
  hgvsp: ENST00000442652.2:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2148C>T
  hgvsp: ENST00000375601.3:c.2148C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2130C>T
  hgvsp: ENST00000423482.2:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1117C>T
  hgvsp: ENST00000397017.2:c.1117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2154C>T
  hgvsp: ENST00000434480.2:c.2154C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2235C>T
  hgvsp: ENST00000397030.1:c.2235C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2148C>T
  hgvsp: ENST00000421756.1:c.2148C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2136C>T
  hgvsp: ENST00000535094.2:c.2136C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2226C>T
  hgvsp: ENST00000375608.3:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2130C>T
  hgvsp: ENST00000375597.4:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2307C>T
  hgvsp: ENST00000375604.2:c.2307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.400C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser712Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

13-113739281-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739281
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739281
    reference: chr 13
allele count: 8
allele frequency: 6.600115502021286e-5
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2149G>A
  hgvsp: ENSP00000397285.1:p.Asp717Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2227G>A
  hgvsp: ENSP00000401422.2:p.Asp743Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2131G>A
  hgvsp: ENSP00000364747.4:p.Asp711Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2137G>A
  hgvsp: ENSP00000440374.2:p.Asp713Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2131G>A
  hgvsp: ENSP00000405639.2:p.Asp711Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1118G>A
  hgvsp: ENSP00000380212.2:p.Asp374Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2155G>A
  hgvsp: ENSP00000407722.2:p.Asp719Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2149G>A
  hgvsp: ENSP00000364751.3:p.Asp717Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2308G>A
  hgvsp: ENSP00000364754.2:p.Asp770Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.401G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2236G>A
  hgvsp: ENSP00000380225.1:p.Asp746Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2227G>A
  hgvsp: ENSP00000364758.3:p.Asp743Asn
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23012
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp713Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

13-113739288-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739288
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739288
    reference: chr 13
allele count: 6
allele frequency: 4.951393817359587e-5
allele num: 121178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2234C>T
  hgvsp: ENSP00000364758.3:p.Pro745Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2144C>T
  hgvsp: ENSP00000440374.2:p.Pro715Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.408C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2162C>T
  hgvsp: ENSP00000407722.2:p.Pro721Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2243C>T
  hgvsp: ENSP00000380225.1:p.Pro748Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2234C>T
  hgvsp: ENSP00000401422.2:p.Pro745Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2315C>T
  hgvsp: ENSP00000364754.2:p.Pro772Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2138C>T
  hgvsp: ENSP00000405639.2:p.Pro713Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2138C>T
  hgvsp: ENSP00000364747.4:p.Pro713Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2156C>T
  hgvsp: ENSP00000364751.3:p.Pro719Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1125C>T
  hgvsp: ENSP00000380212.2:p.Pro376Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2156C>T
  hgvsp: ENSP00000397285.1:p.Pro719Leu
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7621
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro715Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

13-113739289-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739289
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739289
    reference: chr 13
allele count: 2
allele frequency: 1.650709805216243e-5
allele num: 121160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2157G>A
  hgvsp: ENST00000375601.3:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2235G>A
  hgvsp: ENST00000442652.2:c.2235G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2316G>A
  hgvsp: ENST00000375604.2:c.2316G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1126G>A
  hgvsp: ENST00000397017.2:c.1126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2157G>A
  hgvsp: ENST00000421756.1:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.409G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2139G>A
  hgvsp: ENST00000423482.2:c.2139G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2244G>A
  hgvsp: ENST00000397030.1:c.2244G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2139G>A
  hgvsp: ENST00000375597.4:c.2139G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2163G>A
  hgvsp: ENST00000434480.2:c.2163G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2235G>A
  hgvsp: ENST00000375608.3:c.2235G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2145G>A
  hgvsp: ENST00000535094.2:c.2145G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro715Pro
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

13-113739308-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739308
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739308
    reference: chr 13
allele count: 2
allele frequency: 1.651554938975045e-5
allele num: 121098
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2154+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2253+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2166+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2166+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.418+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2325+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1135+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2172+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2148+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2244+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2244+10C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2148+10C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

13-113739309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739309
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739309
    reference: chr 13
allele count: 6
allele frequency: 4.954992154595755e-5
allele num: 121090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2166+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2148+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2154+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2148+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2253+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2244+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2325+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.418+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2244+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2166+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2172+11G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1135+11G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22996
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

13-113739316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739316
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739316
    reference: chr 13
allele count: 3
allele frequency: 2.477577919825579e-5
allele num: 121086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2148+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2244+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2166+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.418+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2253+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2325+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1135+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2244+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2166+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2154+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2148+18C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2172+18C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

13-113739325-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739325
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739325
    reference: chr 13
allele count: 13
allele frequency: 1.074131605909376e-4
allele num: 121028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2166+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2325+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1135+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2253+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2148+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2244+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2172+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2244+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2154+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.418+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2166+27C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2148+27C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14244
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

13-113739345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739345
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739345
    reference: chr 13
allele count: 12
allele frequency: 9.925394120858216e-5
allele num: 120902
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2172+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2244+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2166+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.418+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2166+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1135+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2325+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2244+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2148+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2148+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2154+47G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2253+47G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7933
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13944
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

13-113739347-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739347
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739347
    reference: chr 13
allele count: 6
allele frequency: 4.962286621675268e-5
allele num: 120912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2166+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2154+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2166+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2172+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2148+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2244+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1135+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2325+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2148+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2253+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2244+49C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.418+49C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22690
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13920
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-113739349-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739349
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739349
    reference: chr 13
allele count: 1
allele frequency: 8.270477702792114e-6
allele num: 120912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2325+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.418+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1135+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2244+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2172+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2148+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2148+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2154+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2166+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2244+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2166+51C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2253+51C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/13-113739357-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739357
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739357
    reference: chr 13
allele count: 10341
allele frequency: 8.557880101956371e-2
allele num: 120836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2173-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2245-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.419-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2149-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2155-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1136-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2167-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2326-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2245-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2254-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2167-43A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2149-43A>C
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 462
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 4.25e1
  variant carriers: 1181
genotype depth: GenotypeDepth
  all individuals: 22542
  bin: 2.75e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 4.75e1
  variant carriers: 1306
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 13622
  bin: 3.25e1
  variant carriers: 632
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 3.75e1
  variant carriers: 1001
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 6.75e1
  variant carriers: 580
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 712
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 372
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.75e1
  variant carriers: 980
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 5.25e1
  variant carriers: 1166
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.75e1
  variant carriers: 261
genotype quality: GenotypeQuality
num of homozygotes: 580
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

13-113739361-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739361
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739361
    reference: chr 13
allele count: 1
allele frequency: 8.271435424903638e-6
allele num: 120898
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2155-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2254-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1136-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2149-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2245-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.419-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2245-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2326-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2167-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2167-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2173-39T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2149-39T>C
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: T
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

13-113739380-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739380
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739380
    reference: chr 13
allele count: 1
allele frequency: 8.273899157717065e-6
allele num: 120862
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2149-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2245-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2326-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2155-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2173-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2254-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1136-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.419-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2167-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2149-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2245-20A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2167-20A>G
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

13-113739382-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739382
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739382
    reference: chr 13
allele count: 1
allele frequency: 8.274309922552459e-6
allele num: 120856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2167-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2245-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2254-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1136-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2245-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2155-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.419-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2149-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2149-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2326-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2173-18G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2167-18G>C
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

13-113739384-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739384
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739383
    reference: chr 13
allele count: 1
allele frequency: 8.274036074797286e-6
allele num: 120860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.419-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2173-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2149-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2245-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2245-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2326-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2155-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1136-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2149-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2167-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2254-15delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2167-15delC
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26691
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: TC
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

13-113739386-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739386
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739387
    reference: chr 13
allele count: 5
allele frequency: 4.137223426613931e-5
allele num: 120854
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2173-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.419-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2167-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2149-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2245-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2167-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2149-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1136-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2326-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2155-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2254-11dupG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2245-11dupG
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

13-113739390-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739390
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739390
    reference: chr 13
allele count: 119
allele frequency: 9.846591755341156e-4
allele num: 120854
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.419-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2167-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2245-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1136-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2245-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2167-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2326-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2155-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2254-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2149-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2173-10T>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2149-10T>G
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9703
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15168
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26727
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

13-113739396-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739396
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739396
    reference: chr 13
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2155-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2149-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2173-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1136-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2254-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2245-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2326-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.419-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2245-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2167-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2167-4C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2149-4C>G
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15179
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26795
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2155-4C>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

13-113739403-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739403
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739403
    reference: chr 13
allele count: 1
allele frequency: 8.275679433281473e-6
allele num: 120836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2176T>C
  hgvsp: ENSP00000407722.2:p.Cys726Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2152T>C
  hgvsp: ENSP00000405639.2:p.Cys718Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2248T>C
  hgvsp: ENSP00000401422.2:p.Cys750Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1139T>C
  hgvsp: ENSP00000380212.2:p.Cys381Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2170T>C
  hgvsp: ENSP00000397285.1:p.Cys724Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2152T>C
  hgvsp: ENSP00000364747.4:p.Cys718Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2329T>C
  hgvsp: ENSP00000364754.2:p.Cys777Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2170T>C
  hgvsp: ENSP00000364751.3:p.Cys724Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2158T>C
  hgvsp: ENSP00000440374.2:p.Cys720Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.422T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2257T>C
  hgvsp: ENSP00000380225.1:p.Cys753Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2248T>C
  hgvsp: ENSP00000364758.3:p.Cys750Arg
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys720Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

13-113739411-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739411
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739411
    reference: chr 13
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2166A>G
  hgvsp: ENST00000535094.2:c.2166A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2256A>G
  hgvsp: ENST00000375608.3:c.2256A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2178A>G
  hgvsp: ENST00000375601.3:c.2178A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2265A>G
  hgvsp: ENST00000397030.1:c.2265A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2337A>G
  hgvsp: ENST00000375604.2:c.2337A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2160A>G
  hgvsp: ENST00000423482.2:c.2160A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2160A>G
  hgvsp: ENST00000375597.4:c.2160A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.430A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1147A>G
  hgvsp: ENST00000397017.2:c.1147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2184A>G
  hgvsp: ENST00000434480.2:c.2184A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2178A>G
  hgvsp: ENST00000421756.1:c.2178A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2256A>G
  hgvsp: ENST00000442652.2:c.2256A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg722Arg
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-113739419-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739419
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739419
    reference: chr 13
allele count: 1
allele frequency: 8.277734549608463e-6
allele num: 120806
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2174A>G
  hgvsp: ENSP00000440374.2:p.Asp725Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2345A>G
  hgvsp: ENSP00000364754.2:p.Asp782Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2168A>G
  hgvsp: ENSP00000405639.2:p.Asp723Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1155A>G
  hgvsp: ENSP00000380212.2:p.Asp386Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.438A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2186A>G
  hgvsp: ENSP00000364751.3:p.Asp729Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2192A>G
  hgvsp: ENSP00000407722.2:p.Asp731Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2273A>G
  hgvsp: ENSP00000380225.1:p.Asp758Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2264A>G
  hgvsp: ENSP00000364758.3:p.Asp755Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2186A>G
  hgvsp: ENSP00000397285.1:p.Asp729Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2264A>G
  hgvsp: ENSP00000401422.2:p.Asp755Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2168A>G
  hgvsp: ENSP00000364747.4:p.Asp723Gly
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp725Gly
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

13-113739420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739420
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739420
    reference: chr 13
allele count: 2
allele frequency: 1.655546909921693e-5
allele num: 120806
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2193C>T
  hgvsp: ENST00000434480.2:c.2193C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2187C>T
  hgvsp: ENST00000375601.3:c.2187C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2187C>T
  hgvsp: ENST00000421756.1:c.2187C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2346C>T
  hgvsp: ENST00000375604.2:c.2346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1156C>T
  hgvsp: ENST00000397017.2:c.1156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2265C>T
  hgvsp: ENST00000375608.3:c.2265C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.439C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2265C>T
  hgvsp: ENST00000442652.2:c.2265C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2169C>T
  hgvsp: ENST00000375597.4:c.2169C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2175C>T
  hgvsp: ENST00000535094.2:c.2175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2169C>T
  hgvsp: ENST00000423482.2:c.2169C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2274C>T
  hgvsp: ENST00000397030.1:c.2274C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp725Asp
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

13-113739427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739427
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739427
    reference: chr 13
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2176C>T
  hgvsp: ENST00000375597.4:c.2176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2182C>T
  hgvsp: ENST00000535094.2:c.2182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2194C>T
  hgvsp: ENST00000375601.3:c.2194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1163C>T
  hgvsp: ENST00000397017.2:c.1163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2353C>T
  hgvsp: ENST00000375604.2:c.2353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.446C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2176C>T
  hgvsp: ENST00000423482.2:c.2176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2272C>T
  hgvsp: ENST00000442652.2:c.2272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2281C>T
  hgvsp: ENST00000397030.1:c.2281C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2194C>T
  hgvsp: ENST00000421756.1:c.2194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2272C>T
  hgvsp: ENST00000375608.3:c.2272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2200C>T
  hgvsp: ENST00000434480.2:c.2200C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15004
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu728Leu
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/13-113739432-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739432
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739432
    reference: chr 13
allele count: 2
allele frequency: 1.656314699792961e-5
allele num: 120750
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2187C>A
  hgvsp: ENSP00000440374.2:p.Ser729Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.451C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1168C>A
  hgvsp: ENSP00000380212.2:p.Ser390Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2205C>A
  hgvsp: ENSP00000407722.2:p.Ser735Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2199C>A
  hgvsp: ENSP00000364751.3:p.Ser733Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2358C>A
  hgvsp: ENSP00000364754.2:p.Ser786Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2199C>A
  hgvsp: ENSP00000397285.1:p.Ser733Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2277C>A
  hgvsp: ENSP00000364758.3:p.Ser759Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2181C>A
  hgvsp: ENSP00000405639.2:p.Ser727Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2181C>A
  hgvsp: ENSP00000364747.4:p.Ser727Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2277C>A
  hgvsp: ENSP00000401422.2:p.Ser759Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2286C>A
  hgvsp: ENSP00000380225.1:p.Ser762Arg
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser729Arg
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD

13-113739433-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739433
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739433
    reference: chr 13
allele count: 2
allele frequency: 1.656204971927326e-5
allele num: 120758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2206C>T
  hgvsp: ENST00000434480.2:c.2206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2182C>T
  hgvsp: ENST00000423482.2:c.2182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2287C>T
  hgvsp: ENST00000397030.1:c.2287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2200C>T
  hgvsp: ENST00000421756.1:c.2200C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2200C>T
  hgvsp: ENST00000375601.3:c.2200C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2182C>T
  hgvsp: ENST00000375597.4:c.2182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2278C>T
  hgvsp: ENST00000375608.3:c.2278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2359C>T
  hgvsp: ENST00000375604.2:c.2359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.452C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2188C>T
  hgvsp: ENST00000535094.2:c.2188C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1169C>T
  hgvsp: ENST00000397017.2:c.1169C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2278C>T
  hgvsp: ENST00000442652.2:c.2278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu730Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

13-113739496-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739496
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739496
    reference: chr 13
allele count: 1
allele frequency: 8.43981567442567e-6
allele num: 118486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+4G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+4G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12043
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2247+4G>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

13-113739497-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739497
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739497
    reference: chr 13
allele count: 1
allele frequency: 8.45809016324114e-6
allele num: 118230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+5G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+5G>C
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11425
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2247+5G>C
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

13-113739500-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739500
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739500
    reference: chr 13
allele count: 2
allele frequency: 1.696755802904846e-5
allele num: 117872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+8C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2247+8C>T
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

13-113739501-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739501
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739501
    reference: chr 13
allele count: 19
allele frequency: 1.612602060735686e-4
allele num: 117822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+9C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+9C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17986
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10033
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8382
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-113739502-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739502
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739502
    reference: chr 13
allele count: 134
allele frequency: 1.138236243480624e-3
allele num: 117726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+10G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+10G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6859
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9885
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 18008
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8371
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 3
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

13-113739503-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739503
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739503
    reference: chr 13
allele count: 3
allele frequency: 2.550066301723845e-5
allele num: 117644
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+11C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+11C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17283
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8757
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

13-113739504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739504
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739504
    reference: chr 13
allele count: 22
allele frequency: 1.875308999778373e-4
allele num: 117314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+12G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+12G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16129
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9171
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8924
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

13-113739509-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739509
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739509
    reference: chr 13
allele count: 1
allele frequency: 8.584427847883938e-6
allele num: 116490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+17C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+17C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11224
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/13-113739510-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739510
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739510
    reference: chr 13
allele count: 4
allele frequency: 3.450834239177321e-5
allele num: 115914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+18C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+18C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11321
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7120
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

13-113739510-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739510
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739510
    reference: chr 13
allele count: 1
allele frequency: 8.627085597943303e-6
allele num: 115914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+18C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+18C>G
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12918
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

13-113739511-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739511
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739511
    reference: chr 13
allele count: 19
allele frequency: 1.639061421670117e-4
allele num: 115920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+19G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+19G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6957
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12264
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13006
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11268
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8043
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

13-113739514-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739514
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739514
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 115518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+22G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+22G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13850
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

13-113739517-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739517
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739516
    reference: chr 13
allele count: 1
allele frequency: 8.702311333890281e-6
allele num: 114912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+27delG
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+27delG
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8434
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
reference allele: CG
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

13-113739518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739518
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739518
    reference: chr 13
allele count: 62974
allele frequency: 5.572525838878664e-1
allele num: 113008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+26G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+26G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 7.5e0
  variant carriers: 1290
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 607
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 396
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 4.25e1
  variant carriers: 1758
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 2.25e1
  variant carriers: 10261
genotype depth: GenotypeDepth
  all individuals: 12312
  bin: 1.75e1
  variant carriers: 9999
genotype depth: GenotypeDepth
  all individuals: 9519
  bin: 2.75e1
  variant carriers: 7202
genotype depth: GenotypeDepth
  all individuals: 8975
  bin: 1.25e1
  variant carriers: 5501
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 920
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 2.5e0
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 3.25e1
  variant carriers: 4466
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 243
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 4.75e1
  variant carriers: 1245
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 3.75e1
  variant carriers: 2700
genotype quality: GenotypeQuality
num of homozygotes: 17631
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/13-113739525-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739525
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739525
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 106776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+33C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+33C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

13-113739528-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739528
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739528
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 105610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+36G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+36G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6226
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/13-113739530-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739530
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739530
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 105242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+38A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+38A>C
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6286
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

13-113739531-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739531
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739531
    reference: chr 13
allele count: 1
allele frequency: 9.473644321497593e-6
allele num: 105556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+39C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+39C>G
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6527
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14551
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

13-113739535-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113739535
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113739535
    reference: chr 13
allele count: 1
allele frequency: 9.587360024543642e-6
allele num: 104304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2346+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2241+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2418+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2241+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2265+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1228+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2247+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2337+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.511+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2259+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2259+43C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2337+43C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16106
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ

13-113740388-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740388
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740388
    reference: chr 13
allele count: 1
allele frequency: 9.583133684714902e-6
allele num: 104350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-50G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-50G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

13-113740398-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740398
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740397
    reference: chr 13
allele count: 1
allele frequency: 9.539436028541992e-6
allele num: 104828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-38delC
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-38delC
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6351
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: TC
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

13-113740399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740399
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740399
    reference: chr 13
allele count: 3
allele frequency: 2.864946425501843e-5
allele num: 104714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-39C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-39C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11192
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15532
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14339
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

13-113740400-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740400
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740400
    reference: chr 13
allele count: 3
allele frequency: 2.871637790753326e-5
allele num: 104470
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-38C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-38C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14506
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11076
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

13-113740401-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740401
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740401
    reference: chr 13
allele count: 3
allele frequency: 2.859484911451284e-5
allele num: 104914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-37G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-37G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10644
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

13-113740407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740407
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740407
    reference: chr 13
allele count: 1
allele frequency: 9.49920206702637e-6
allele num: 105272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-31C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-31C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

13-113740410-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740410
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740410
    reference: chr 13
allele count: 1
allele frequency: 9.443048971651967e-6
allele num: 105898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-28C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-28C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18910
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

13-113740411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740411
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740411
    reference: chr 13
allele count: 6
allele frequency: 5.64121850319669e-5
allele num: 106360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-27G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-27G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7397
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19797
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

13-113740412-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740412
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740412
    reference: chr 13
allele count: 17
allele frequency: 1.598375298520092e-4
allele num: 106358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-26C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-26C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6580
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7176
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

13-113740413-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740413
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740413
    reference: chr 13
allele count: 76
allele frequency: 7.118104336424089e-4
allele num: 106770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-25G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-25G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12179
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7836
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 21354
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6436
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

13-113740413-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740413
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740413
    reference: chr 13
allele count: 1
allele frequency: 9.36592675845275e-6
allele num: 106770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-25G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-25G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7836
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6436
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

13-113740417-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740417
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740417
    reference: chr 13
allele count: 7
allele frequency: 6.496399138763085e-5
allele num: 107752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-21G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-21G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8249
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23167
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/13-113740422-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740422
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740422
    reference: chr 13
allele count: 1
allele frequency: 9.19151439391154e-6
allele num: 108796
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.512-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2260-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2248-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1229-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2266-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2338-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2260-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2419-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2242-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2338-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2242-16A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2347-16A>C
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8940
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/13-113740444-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740444
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740444
    reference: chr 13
allele count: 3
allele frequency: 2.644942869234025e-5
allele num: 113424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2248C>A
  hgvsp: ENSP00000405639.2:p.Leu750Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2353C>A
  hgvsp: ENSP00000380225.1:p.Leu785Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1235C>A
  hgvsp: ENSP00000380212.2:p.Leu413Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2254C>A
  hgvsp: ENSP00000440374.2:p.Leu752Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.518C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2344C>A
  hgvsp: ENSP00000364758.3:p.Leu782Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2248C>A
  hgvsp: ENSP00000364747.4:p.Leu750Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2425C>A
  hgvsp: ENSP00000364754.2:p.Leu809Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2266C>A
  hgvsp: ENSP00000364751.3:p.Leu756Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2344C>A
  hgvsp: ENSP00000401422.2:p.Leu782Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2272C>A
  hgvsp: ENSP00000407722.2:p.Leu758Met
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2266C>A
  hgvsp: ENSP00000397285.1:p.Leu756Met
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu752Met
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

13-113740455-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740455
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740455
    reference: chr 13
allele count: 3
allele frequency: 2.601141033866856e-5
allele num: 115334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2355C>T
  hgvsp: ENST00000442652.2:c.2355C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2283C>T
  hgvsp: ENST00000434480.2:c.2283C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2364C>T
  hgvsp: ENST00000397030.1:c.2364C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2265C>T
  hgvsp: ENST00000535094.2:c.2265C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2259C>T
  hgvsp: ENST00000375597.4:c.2259C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2259C>T
  hgvsp: ENST00000423482.2:c.2259C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2355C>T
  hgvsp: ENST00000375608.3:c.2355C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1246C>T
  hgvsp: ENST00000397017.2:c.1246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2277C>T
  hgvsp: ENST00000421756.1:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.529C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2436C>T
  hgvsp: ENST00000375604.2:c.2436C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2277C>T
  hgvsp: ENST00000375601.3:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30889
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser755Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

13-113740464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740464
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740464
    reference: chr 13
allele count: 3
allele frequency: 2.570914388550861e-5
allele num: 116690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2268C>T
  hgvsp: ENST00000375597.4:c.2268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1255C>T
  hgvsp: ENST00000397017.2:c.1255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2373C>T
  hgvsp: ENST00000397030.1:c.2373C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2292C>T
  hgvsp: ENST00000434480.2:c.2292C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2274C>T
  hgvsp: ENST00000535094.2:c.2274C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.538C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2445C>T
  hgvsp: ENST00000375604.2:c.2445C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2364C>T
  hgvsp: ENST00000442652.2:c.2364C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2364C>T
  hgvsp: ENST00000375608.3:c.2364C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2286C>T
  hgvsp: ENST00000375601.3:c.2286C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2268C>T
  hgvsp: ENST00000423482.2:c.2268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2286C>T
  hgvsp: ENST00000421756.1:c.2286C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14043
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys758Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

13-113740470-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740470
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740470
    reference: chr 13
allele count: 1
allele frequency: 8.484930762964974e-6
allele num: 117856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2379G>C
  hgvsp: ENST00000397030.1:c.2379G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2298G>C
  hgvsp: ENST00000434480.2:c.2298G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2280G>C
  hgvsp: ENST00000535094.2:c.2280G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2292G>C
  hgvsp: ENST00000375601.3:c.2292G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.544G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1261G>C
  hgvsp: ENST00000397017.2:c.1261G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2370G>C
  hgvsp: ENST00000375608.3:c.2370G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2274G>C
  hgvsp: ENST00000423482.2:c.2274G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2292G>C
  hgvsp: ENST00000421756.1:c.2292G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2451G>C
  hgvsp: ENST00000375604.2:c.2451G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2274G>C
  hgvsp: ENST00000375597.4:c.2274G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2370G>C
  hgvsp: ENST00000442652.2:c.2370G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly760Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

13-113740476-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740476
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740476
    reference: chr 13
allele count: 1
allele frequency: 8.435686327439601e-6
allele num: 118544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1267G>A
  hgvsp: ENST00000397017.2:c.1267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2376G>A
  hgvsp: ENST00000442652.2:c.2376G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2457G>A
  hgvsp: ENST00000375604.2:c.2457G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2304G>A
  hgvsp: ENST00000434480.2:c.2304G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000487354
  gene symbol: MCF2L
  hgvsc: ENST00000487354.1:n.550G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2385G>A
  hgvsp: ENST00000397030.1:c.2385G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2280G>A
  hgvsp: ENST00000375597.4:c.2280G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2286G>A
  hgvsp: ENST00000535094.2:c.2286G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2298G>A
  hgvsp: ENST00000421756.1:c.2298G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2376G>A
  hgvsp: ENST00000375608.3:c.2376G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2280G>A
  hgvsp: ENST00000423482.2:c.2280G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2298G>A
  hgvsp: ENST00000375601.3:c.2298G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu762Glu
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

13-113740491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113740491
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113740491
    reference: chr 13
allele count: 10
allele frequency: 8.360784576024614e-5
allele num: 119606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.2313G>A
  hgvsp: ENST00000421756.1:c.2313G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.2391G>A
  hgvsp: ENST00000375608.3:c.2391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.2391G>A
  hgvsp: ENST00000442652.2:c.2391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380212
  ensembl transcript: ENST00000397017
  gene symbol: MCF2L
  hgvsc: ENST00000397017.2:c.1282G>A
  hgvsp: ENST00000397017.2:c.1282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.2472G>A
  hgvsp: ENST00000375604.2:c.2472G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.2313G>A
  hgvsp: ENST00000375601.3:c.2313G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.2301G>A
  hgvsp: ENST00000535094.2:c.2301G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.2319G>A
  hgvsp: ENST00000434480.2:c.2319G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.2295G>A
  hgvsp: ENST00000375597.4:c.2295G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.2400G>A
  hgvsp: ENST00000397030.1:c.2400G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.2295G>A
  hgvsp: ENST00000423482.2:c.2295G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16177
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32414
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala767Ala
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 203
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1991
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4960
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3450
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2977
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9130
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8943
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.015532e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.9e1

MQRankSum
type: SiteQuality
SIO_000300: 4.73e-1

QD
type: SiteQuality
SIO_000300: 1.737e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.965e0

FS
type: SiteQuality
SIO_000300: 6.48e-1

GenotypeDepth
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 811
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9127
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8944
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3450
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31041
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

FS
type: SiteQuality
SIO_000300: 8.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

DP
type: SiteQuality
SIO_000300: 2.015438e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.837e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

QD
type: SiteQuality
SIO_000300: 9.48e0

GenotypeDepth
all individuals: 345
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1991
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 150
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9126
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8937
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3444
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30995
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.039999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 8.75e-1

DP
type: SiteQuality
SIO_000300: 2.014735e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.814e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

FS
type: SiteQuality
SIO_000300: 2.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2855
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1135
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 354
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8933
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30982
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9125
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2981
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 6.735950731331793e-4
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.952831605828451e-4
allele num: 66570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

DP
type: SiteQuality
SIO_000300: 2.014854e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

GenotypeDepth
all individuals: 201
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 345
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 810
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1991
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3441
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8932
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30995
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.051556303328927e-4
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num of homozygotes: 0

Other
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South Asian
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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allele frequency: 3.005168890491646e-5
allele num: 66552
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Latino
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FS
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ClippingRankSum
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QD
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

African
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Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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QD
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DP
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.978e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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African
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Latino
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.008061605101673e-5
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BaseQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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South Asian
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VQSLOD
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InbreedingCoeff
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QD
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FS
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DP
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11550
num of homozygotes: 0

Other
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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South Asian
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66436
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European (Finnish)
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East Asian
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African
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Other
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Latino
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South Asian
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QD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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DP
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3330
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.662508662508662e-4
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66342
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.654373431164318e-5
allele num: 10358
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.43e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

DP
type: SiteQuality
SIO_000300: 1.993754e6

QD
type: SiteQuality
SIO_000300: 1.398e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

GenotypeDepth
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8630
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3328
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2873
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9019
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1472
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.536022186049316e-5
allele num: 66348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.010999999999999e0

DP
type: SiteQuality
SIO_000300: 1.993311e6

QD
type: SiteQuality
SIO_000300: 1.182e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.803e0

GenotypeDepth
all individuals: 199
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9013
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 178
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
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variant carriers: 0

GenotypeQuality
all individuals: 2359
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30462
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507340749449821e-5
allele num: 66342
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.125e0

VQSLOD
type: SiteQuality
SIO_000300: -1.126e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 7.354e0

QD
type: SiteQuality
SIO_000300: 1.822e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.94e-1

DP
type: SiteQuality
SIO_000300: 1.993019e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

GenotypeDepth
all individuals: 8086
bin: 2.25e1
variant carriers: 177

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 2857
bin: 7.75e1
variant carriers: 14

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 30126
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 899
bin: 9.25e1
variant carriers: 16

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2596
bin: 7.25e1
variant carriers: 13

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 319
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 176
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 674
bin: 8.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1887
bin: 8.25e1
variant carriers: 18

GenotypeQuality
all individuals: 12038
bin: 9.75e1
variant carriers: 9643

GenotypeQuality
all individuals: 8188
bin: 6.75e1
variant carriers: 9

African
type: Population
allele count: 870
allele frequency: 8.400926998841252e-2
allele num: 10356
num of homozygotes: 30

Other
type: Population
allele count: 74
allele frequency: 8.167770419426049e-2
allele num: 906
num of homozygotes: 5

Latino
type: Population
allele count: 1055
allele frequency: 9.145284327323162e-2
allele num: 11536
num of homozygotes: 38

European (Non-Finnish)
type: Population
allele count: 4765
allele frequency: 7.185294649858255e-2
allele num: 66316
num of homozygotes: 171

European (Finnish)
type: Population
allele count: 321
allele frequency: 4.857748184019371e-2
allele num: 6608
num of homozygotes: 10

East Asian
type: Population
allele count: 2281
allele frequency: 2.64924506387921e-1
allele num: 8610
num of homozygotes: 294

South Asian
type: Population
allele count: 975
allele frequency: 5.907658749394086e-2
allele num: 16504
num of homozygotes: 32

DP
type: SiteQuality
SIO_000300: 2.021293e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

FS
type: SiteQuality
SIO_000300: 5.16e-1

QD
type: SiteQuality
SIO_000300: 1.697e1

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.05e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

GenotypeDepth
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3357
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3167
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 157
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66336
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.831e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.08e-1

DP
type: SiteQuality
SIO_000300: 1.797673e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.03e-1

QD
type: SiteQuality
SIO_000300: 1.655e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.66e-1

GenotypeDepth
all individuals: 15240
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3138
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 346
bin: 2.25e1
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GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2996
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508204633204633e-5
allele num: 66304
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.796818e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.337e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeDepth
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 2996
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3137
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508295625942685e-5
allele num: 66300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.796618e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.72e-1

QD
type: SiteQuality
SIO_000300: 1.248e1

FS
type: SiteQuality
SIO_000300: 1.729e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeDepth
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
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GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 796
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GenotypeQuality
all individuals: 36766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
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GenotypeQuality
all individuals: 89
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 2994
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3136
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9576
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.66183574879227e-5
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66300
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.796648e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.87e-1

QD
type: SiteQuality
SIO_000300: 1.519e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.016e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

FS
type: SiteQuality
SIO_000300: 3.182e0

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

GenotypeDepth
all individuals: 83
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3137
bin: 9.75e1
variant carriers: 5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.029568589432865e-4
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66300
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

FS
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SIO_000300: 3.799e0

MQ
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SIO_000300: 5.997e1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

ReadPosRankSum
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SIO_000300: -1.062e0

DP
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SIO_000300: 1.796785e6

ClippingRankSum
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SIO_000300: 8.9e-2

BaseQRankSum
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SIO_000300: 3.54e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3193
bin: 9.75e1
variant carriers: 119

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 34
allele frequency: 2.944232767578801e-3
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.52502337928746e-5
allele num: 66298
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.423654871546292e-4
allele num: 16504
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.899110939311944e-4
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 75
allele frequency: 8.680555555555556e-3
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

QD
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SIO_000300: 1.344e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.01e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
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SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 1.797683e6

InbreedingCoeff
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SIO_000300: -1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 27
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3080
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variant carriers: 1

GenotypeQuality
all individuals: 3249
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

DP
type: SiteQuality
SIO_000300: 1.795245e6

FS
type: SiteQuality
SIO_000300: 1.453e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.05e-1

QD
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SIO_000300: 6.95e0

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.55e-1

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37211
bin: 6.25e1
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GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66280
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.795065e6

FS
type: SiteQuality
SIO_000300: 5.37e-1

VQSLOD
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BaseQRankSum
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QD
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SIO_000300: 1.409e1

ReadPosRankSum
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SIO_000300: -5.0e-2

MQRankSum
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SIO_000300: -1.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
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SIO_000300: 1.794206e6

InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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QD
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MQ
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SIO_000300: 5.954e1

MQRankSum
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SIO_000300: -5.79e-1

ClippingRankSum
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SIO_000300: 6.820000000000001e-1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66254
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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InbreedingCoeff
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QD
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MQ
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DP
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 59
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variant carriers: 0

Other
type: Population
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African
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East Asian
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European (Non-Finnish)
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MQRankSum
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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DP
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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ReadPosRankSum
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VQSLOD
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DP
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ClippingRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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MQ
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FS
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QD
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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DP
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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QD
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GenotypeDepth
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GenotypeQuality
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VQSLOD
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DP
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 18

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23219
bin: 6.25e1
variant carriers: 0

South Asian
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allele count: 5
allele frequency: 3.067861087249969e-4
allele num: 16298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.690412943733398e-3
allele num: 8282
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.922e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

QD
type: SiteQuality
SIO_000300: 1.065e1

DP
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VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 8.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

GenotypeDepth
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bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 141
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 4.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 128

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 978
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variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 7
allele frequency: 6.225542511561721e-4
allele num: 11244
num of homozygotes: 0

African
type: Population
allele count: 123
allele frequency: 1.228280407429599e-2
allele num: 10014
num of homozygotes: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.194635445704021e-5
allele num: 64572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
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SIO_000300: 2.53e-1

DP
type: SiteQuality
SIO_000300: 1.553081e6

InbreedingCoeff
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SIO_000300: 1.38e-2

BaseQRankSum
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SIO_000300: -2.243e0

QD
type: SiteQuality
SIO_000300: 1.378e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6039
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variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.137228427642077e-5
allele num: 16294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.099621846134772e-5
allele num: 64524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8260
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.586e0

DP
type: SiteQuality
SIO_000300: 1.537287e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

ClippingRankSum
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SIO_000300: -1.129e0

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
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SIO_000300: 2.31e0

QD
type: SiteQuality
SIO_000300: 1.255e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 10270
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 687
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
all individuals: 762
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variant carriers: 0

GenotypeQuality
all individuals: 21096
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variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.84320471860408e-4
allele num: 16276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.141552511415525e-3
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.301046483329277e-4
allele num: 8218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.663889061625521e-5
allele num: 64324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 9.027081243731193e-4
allele num: 9970
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

DP
type: SiteQuality
SIO_000300: 1.514588e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

FS
type: SiteQuality
SIO_000300: 1.681e0

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.323e1

GenotypeDepth
all individuals: 12844
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5313
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variant carriers: 0

GenotypeQuality
all individuals: 2421
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565680288085173e-5
allele num: 63870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.191e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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SIO_000300: 1.31e1

ReadPosRankSum
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SIO_000300: 1.08e0

VQSLOD
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SIO_000300: 9.96e-1

BaseQRankSum
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SIO_000300: -1.535e0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

InbreedingCoeff
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SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e0

DP
type: SiteQuality
SIO_000300: 1.463891e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573415570520486e-5
allele num: 63556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.043831168831169e-4
allele num: 9856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11070
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.42e-1

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.002e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.452728e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

FS
type: SiteQuality
SIO_000300: 9.93e-1

BaseQRankSum
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SIO_000300: 1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

GenotypeDepth
all individuals: 493
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573415570520486e-5
allele num: 63556
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 7.3e-3

ClippingRankSum
type: SiteQuality
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QD
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SIO_000300: 1.002e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1953
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GenotypeQuality
all individuals: 2386
bin: 7.75e1
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GenotypeQuality
all individuals: 523
bin: 5.75e1
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GenotypeQuality
all individuals: 970
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3000
bin: 9.75e1
variant carriers: 19

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11066
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.17457962413452e-3
allele num: 16176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.981e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

DP
type: SiteQuality
SIO_000300: 1.450181e6

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

GenotypeDepth
all individuals: 71
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2770
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3137
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5594
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5433
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4640
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1753
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12456
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2985
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5626
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.433741e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

QD
type: SiteQuality
SIO_000300: 2.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.638e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 8.962999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -2.055e0

GenotypeDepth
all individuals: 489
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2799
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11092
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4727
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
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variant carriers: 0

GenotypeQuality
all individuals: 5424
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 679
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variant carriers: 1

GenotypeQuality
all individuals: 4385
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variant carriers: 0

GenotypeQuality
all individuals: 5741
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5503
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2989
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4025
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1897
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.586948931983369e-5
allele num: 63014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.425796e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.15e-1

FS
type: SiteQuality
SIO_000300: 7.048e0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.274e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 1.688e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

GenotypeDepth
all individuals: 51
bin: 9.25e1
variant carriers: 47

GenotypeQuality
all individuals: 1818
bin: 4.75e1
variant carriers: 1477

GenotypeQuality
all individuals: 1164
bin: 4.25e1
variant carriers: 795

GenotypeQuality
all individuals: 742
bin: 2.5e0
variant carriers: 139

GenotypeQuality
all individuals: 4695
bin: 6.25e1
variant carriers: 1625

GenotypeQuality
all individuals: 477
bin: 7.5e0
variant carriers: 196

GenotypeQuality
all individuals: 2845
bin: 2.25e1
variant carriers: 440

GenotypeQuality
all individuals: 1917
bin: 5.25e1
variant carriers: 1656

GenotypeQuality
all individuals: 541
bin: 1.75e1
variant carriers: 338

GenotypeQuality
all individuals: 1425
bin: 2.75e1
variant carriers: 407

GenotypeQuality
all individuals: 2277
bin: 6.75e1
variant carriers: 1583

GenotypeQuality
all individuals: 385
bin: 1.25e1
variant carriers: 223

GenotypeQuality
all individuals: 2167
bin: 3.25e1
variant carriers: 762

GenotypeQuality
all individuals: 31590
bin: 9.75e1
variant carriers: 31223

GenotypeQuality
all individuals: 1491
bin: 7.75e1
variant carriers: 1223

GenotypeQuality
all individuals: 1311
bin: 8.25e1
variant carriers: 1097

GenotypeQuality
all individuals: 992
bin: 7.25e1
variant carriers: 753

GenotypeQuality
all individuals: 606
bin: 8.75e1
variant carriers: 532

GenotypeQuality
all individuals: 1093
bin: 5.75e1
variant carriers: 916

GenotypeQuality
all individuals: 957
bin: 9.25e1
variant carriers: 837

GenotypeQuality
all individuals: 2115
bin: 3.75e1
variant carriers: 1126

European (Finnish)
type: Population
allele count: 3799
allele frequency: 6.199412532637075e-1
allele num: 6128
num of homozygotes: 1162

African
type: Population
allele count: 4545
allele frequency: 4.719626168224299e-1
allele num: 9630
num of homozygotes: 1041

Other
type: Population
allele count: 505
allele frequency: 5.941176470588235e-1
allele num: 850
num of homozygotes: 153

South Asian
type: Population
allele count: 8896
allele frequency: 5.544060825127758e-1
allele num: 16046
num of homozygotes: 2507

Latino
type: Population
allele count: 4936
allele frequency: 4.706331045003814e-1
allele num: 10488
num of homozygotes: 1100

East Asian
type: Population
allele count: 2242
allele frequency: 2.912444790854767e-1
allele num: 7698
num of homozygotes: 287

European (Non-Finnish)
type: Population
allele count: 38051
allele frequency: 6.120673015055977e-1
allele num: 62168
num of homozygotes: 11381

QD
type: SiteQuality
SIO_000300: 2.295e1

FS
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 1.485113e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.99e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

GenotypeDepth
all individuals: 7988
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4724
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2945
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7485
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6047
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2374
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variant carriers: 0

GenotypeQuality
all individuals: 216
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variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11568
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1041
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11176
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

QD
type: SiteQuality
SIO_000300: 2.61e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.88e-1

FS
type: SiteQuality
SIO_000300: 7.431e0

VQSLOD
type: SiteQuality
SIO_000300: -2.474e0

DP
type: SiteQuality
SIO_000300: 1.179329e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeDepth
all individuals: 1781
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
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variant carriers: 0

GenotypeQuality
all individuals: 4868
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
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GenotypeQuality
all individuals: 10790
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
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variant carriers: 0

GenotypeQuality
all individuals: 2703
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variant carriers: 0

GenotypeQuality
all individuals: 796
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variant carriers: 0

GenotypeQuality
all individuals: 484
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GenotypeQuality
all individuals: 9519
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variant carriers: 0

GenotypeQuality
all individuals: 7641
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variant carriers: 0

GenotypeQuality
all individuals: 2694
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variant carriers: 0

GenotypeQuality
all individuals: 2900
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variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2570
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6457
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.366e1

DP
type: SiteQuality
SIO_000300: 1.157553e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

GenotypeDepth
all individuals: 217
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9799
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
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variant carriers: 0

GenotypeQuality
all individuals: 274
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GenotypeQuality
all individuals: 2908
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1381
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variant carriers: 0

GenotypeQuality
all individuals: 2695
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7610
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10860
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 7.25e1
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GenotypeQuality
all individuals: 2605
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 5.75e1
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GenotypeQuality
all individuals: 691
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variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2566
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5634
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
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SIO_000300: -2.752e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.154545e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.593e1

GenotypeDepth
all individuals: 51
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7672
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 4.25e1
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GenotypeQuality
all individuals: 4872
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variant carriers: 0

GenotypeQuality
all individuals: 454
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variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2566
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1295
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6486
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.735086927855086e-5
allele num: 57634
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Latino
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -2.7e-3

ClippingRankSum
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Latino
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QD
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VQSLOD
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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African
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South Asian
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East Asian
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InbreedingCoeff
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QD
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ReadPosRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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allele num: 10596
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Other
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South Asian
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BaseQRankSum
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SIO_000300: -4.67e-1

FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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MQ
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

Latino
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South Asian
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Other
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European (Non-Finnish)
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allele num: 58778
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East Asian
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African
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9154
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.704448610874382e-5
allele num: 58670
num of homozygotes: 0

Latino
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allele num: 10562
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East Asian
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Other
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South Asian
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European (Finnish)
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 12378
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African
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Latino
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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ClippingRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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South Asian
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African
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East Asian
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European (Finnish)
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Latino
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MQRankSum
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QD
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DP
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VQSLOD
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ClippingRankSum
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SIO_000300: 4.41e-1

InbreedingCoeff
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ReadPosRankSum
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SIO_000300: -3.44e-1

MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.645e0

BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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allele frequency: 7.810059356451109e-5
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East Asian
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ClippingRankSum
type: SiteQuality
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -8.0e-4

FS
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MQRankSum
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SIO_000300: -3.6e-2

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 59406
num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.315925766076823e-4
allele num: 9268
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South Asian
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allele frequency: 0.0e0
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FS
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SIO_000300: 1.0069e1

MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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QD
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SIO_000300: 1.02e1

VQSLOD
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SIO_000300: 1.33e-1

InbreedingCoeff
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SIO_000300: -7.0e-4

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 9.386146048432514e-5
allele num: 10654
num of homozygotes: 0

African
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allele count: 10
allele frequency: 1.079913606911447e-3
allele num: 9260
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South Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 768
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European (Finnish)
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allele count: 1
allele frequency: 1.797914419273643e-4
allele num: 5562
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 5
allele frequency: 8.41609156707625e-5
allele num: 59410
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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SIO_000300: 5.96e-1

QD
type: SiteQuality
SIO_000300: 1.341e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 3
allele frequency: 5.380200860832137e-4
allele num: 5576
num of homozygotes: 0

Other
type: Population
allele count: 0
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Latino
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allele count: 2
allele frequency: 1.87160771102377e-4
allele num: 10686
num of homozygotes: 0

South Asian
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allele frequency: 3.781576160943881e-4
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European (Non-Finnish)
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allele frequency: 1.041596666890666e-3
allele num: 59524
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East Asian
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African
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allele num: 9268
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QD
type: SiteQuality
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VQSLOD
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FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13222
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.679994624017203e-5
allele num: 59524
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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East Asian
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MQ
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 59948
num of homozygotes: 0

European (Finnish)
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East Asian
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South Asian
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African
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Latino
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Other
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ReadPosRankSum
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DP
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QD
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
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allele num: 10778
num of homozygotes: 0

South Asian
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allele frequency: 7.126567844925884e-5
allele num: 14032
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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European (Non-Finnish)
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Other
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MQRankSum
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QD
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ClippingRankSum
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DP
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InbreedingCoeff
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -8.51e-1

GenotypeDepth
all individuals: 11501
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
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variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2427
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4915
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2851
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11000
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.463288521199587e-5
allele num: 15472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.211510052026463e-5
allele num: 62276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6030
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.73e-1

DP
type: SiteQuality
SIO_000300: 1.372591e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.384e0

FS
type: SiteQuality
SIO_000300: 1.4191e1

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
SIO_000300: 1.217e1

VQSLOD
type: SiteQuality
SIO_000300: -1.869e0

GenotypeDepth
all individuals: 27
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1270
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 130
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2716
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6897
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31475
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 799
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1682
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.69735659054127e-4
allele num: 11122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15812
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 1.325e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.14e-1

FS
type: SiteQuality
SIO_000300: 5.404e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.424015e6

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5624
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 933
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33200
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7372
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.672367717797969e-4
allele num: 11226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.493e0

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

MQ
type: SiteQuality
SIO_000300: 5.929e1

QD
type: SiteQuality
SIO_000300: 1.365e1

DP
type: SiteQuality
SIO_000300: 1.463946e6

GenotypeDepth
all individuals: 1396
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 615
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3171
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3752
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7859
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2116
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 681
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550339524355834e-5
allele num: 64502
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.578e1

FS
type: SiteQuality
SIO_000300: 1.738e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.773e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.089e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

DP
type: SiteQuality
SIO_000300: 1.493318e6

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 361
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34465
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3297
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8092
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3960
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177578897786152e-4
allele num: 8492
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e0

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

DP
type: SiteQuality
SIO_000300: 1.512916e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.032e0

QD
type: SiteQuality
SIO_000300: 1.536e1

FS
type: SiteQuality
SIO_000300: 5.628e0

GenotypeDepth
all individuals: 370
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35314
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8473
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0