13-113679006-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679006
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679006
    reference: chr 13
allele count: 2
allele frequency: 1.651145895251304e-5
allele num: 121128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.224C>T
  hgvsp: ENSP00000397285.1:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.224C>T
  hgvsp: ENSP00000364751.3:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.29C>T
  hgvsp: ENSP00000471913.1:p.Pro10Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.302C>T
  hgvsp: ENSP00000401422.2:p.Pro101Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.230C>T
  hgvsp: ENSP00000395707.1:p.Pro77Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.302C>T
  hgvsp: ENSP00000364758.3:p.Pro101Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.383C>T
  hgvsp: ENSP00000364754.2:p.Pro128Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.206C>T
  hgvsp: ENSP00000364747.4:p.Pro69Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.311C>T
  hgvsp: ENSP00000380225.1:p.Pro104Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.125C>T
  hgvsp: ENSP00000386551.2:p.Pro42Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.206C>T
  hgvsp: ENSP00000405639.2:p.Pro69Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.230C>T
  hgvsp: ENSP00000407722.2:p.Pro77Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.206C>T
  hgvsp: ENSP00000380219.1:p.Pro69Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.212C>T
  hgvsp: ENSP00000440374.2:p.Pro71Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.332C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro71Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/13-113679009-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679009
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679009
    reference: chr 13
allele count: 2
allele frequency: 1.650791554550407e-5
allele num: 121154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.128C>A
  hgvsp: ENSP00000386551.2:p.Ala43Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.209C>A
  hgvsp: ENSP00000380219.1:p.Ala70Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.209C>A
  hgvsp: ENSP00000405639.2:p.Ala70Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.227C>A
  hgvsp: ENSP00000364751.3:p.Ala76Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.227C>A
  hgvsp: ENSP00000397285.1:p.Ala76Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.209C>A
  hgvsp: ENSP00000364747.4:p.Ala70Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.305C>A
  hgvsp: ENSP00000364758.3:p.Ala102Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.305C>A
  hgvsp: ENSP00000401422.2:p.Ala102Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.386C>A
  hgvsp: ENSP00000364754.2:p.Ala129Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.215C>A
  hgvsp: ENSP00000440374.2:p.Ala72Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.32C>A
  hgvsp: ENSP00000471913.1:p.Ala11Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.233C>A
  hgvsp: ENSP00000407722.2:p.Ala78Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.233C>A
  hgvsp: ENSP00000395707.1:p.Ala78Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.335C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.314C>A
  hgvsp: ENSP00000380225.1:p.Ala105Asp
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala72Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

13-113679009-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679009
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679009
    reference: chr 13
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.233C>G
  hgvsp: ENSP00000407722.2:p.Ala78Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.128C>G
  hgvsp: ENSP00000386551.2:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.209C>G
  hgvsp: ENSP00000364747.4:p.Ala70Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.215C>G
  hgvsp: ENSP00000440374.2:p.Ala72Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.227C>G
  hgvsp: ENSP00000364751.3:p.Ala76Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.209C>G
  hgvsp: ENSP00000405639.2:p.Ala70Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.314C>G
  hgvsp: ENSP00000380225.1:p.Ala105Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.305C>G
  hgvsp: ENSP00000364758.3:p.Ala102Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.233C>G
  hgvsp: ENSP00000395707.1:p.Ala78Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.209C>G
  hgvsp: ENSP00000380219.1:p.Ala70Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.386C>G
  hgvsp: ENSP00000364754.2:p.Ala129Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.305C>G
  hgvsp: ENSP00000401422.2:p.Ala102Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.227C>G
  hgvsp: ENSP00000397285.1:p.Ala76Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.32C>G
  hgvsp: ENSP00000471913.1:p.Ala11Gly
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.335C>G
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala72Gly
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

13-113679010-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679010
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679010
    reference: chr 13
allele count: 7
allele frequency: 5.777388950330962e-5
allele num: 121162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.306C>T
  hgvsp: ENST00000442652.2:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.387C>T
  hgvsp: ENST00000375604.2:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.210C>T
  hgvsp: ENST00000423482.2:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.228C>T
  hgvsp: ENST00000375601.3:c.228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.336C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.306C>T
  hgvsp: ENST00000375608.3:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.210C>T
  hgvsp: ENST00000375597.4:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.228C>T
  hgvsp: ENST00000421756.1:c.228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.234C>T
  hgvsp: ENST00000433807.1:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.210C>T
  hgvsp: ENST00000397024.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.129C>T
  hgvsp: ENST00000409954.2:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.33C>T
  hgvsp: ENST00000486806.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.234C>T
  hgvsp: ENST00000434480.2:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.315C>T
  hgvsp: ENST00000397030.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.216C>T
  hgvsp: ENST00000535094.2:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala72Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum

13-113679015-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679015
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679015
    reference: chr 13
allele count: 2
allele frequency: 1.650682557237418e-5
allele num: 121162
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.215G>A
  hgvsp: ENSP00000380219.1:p.Ser72Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.215G>A
  hgvsp: ENSP00000364747.4:p.Ser72Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.311G>A
  hgvsp: ENSP00000364758.3:p.Ser104Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.233G>A
  hgvsp: ENSP00000364751.3:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.215G>A
  hgvsp: ENSP00000405639.2:p.Ser72Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.392G>A
  hgvsp: ENSP00000364754.2:p.Ser131Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.38G>A
  hgvsp: ENSP00000471913.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.233G>A
  hgvsp: ENSP00000397285.1:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.134G>A
  hgvsp: ENSP00000386551.2:p.Ser45Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.311G>A
  hgvsp: ENSP00000401422.2:p.Ser104Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.4G>A
  hgvsp: ENSP00000473071.1:p.Ser2Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.239G>A
  hgvsp: ENSP00000395707.1:p.Ser80Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.239G>A
  hgvsp: ENSP00000407722.2:p.Ser80Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.221G>A
  hgvsp: ENSP00000440374.2:p.Ser74Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.320G>A
  hgvsp: ENSP00000380225.1:p.Ser107Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.341G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser74Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

13-113679016-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679016
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679016
    reference: chr 13
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.240C>T
  hgvsp: ENST00000433807.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.216C>T
  hgvsp: ENST00000423482.2:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.321C>T
  hgvsp: ENST00000397030.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.222C>T
  hgvsp: ENST00000535094.2:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.234C>T
  hgvsp: ENST00000375601.3:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.342C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.216C>T
  hgvsp: ENST00000375597.4:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.5C>T
  hgvsp: ENST00000473345.1:c.5C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.135C>T
  hgvsp: ENST00000409954.2:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.312C>T
  hgvsp: ENST00000442652.2:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.312C>T
  hgvsp: ENST00000375608.3:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.216C>T
  hgvsp: ENST00000397024.1:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.234C>T
  hgvsp: ENST00000421756.1:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.393C>T
  hgvsp: ENST00000375604.2:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.39C>T
  hgvsp: ENST00000486806.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.240C>T
  hgvsp: ENST00000434480.2:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser74Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-113679019-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679019
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679019
    reference: chr 13
allele count: 271
allele frequency: 2.236785631747499e-3
allele num: 121156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.237G>A
  hgvsp: ENST00000421756.1:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.345G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.243G>A
  hgvsp: ENST00000434480.2:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.324G>A
  hgvsp: ENST00000397030.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.219G>A
  hgvsp: ENST00000423482.2:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.225G>A
  hgvsp: ENST00000535094.2:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.315G>A
  hgvsp: ENST00000375608.3:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.243G>A
  hgvsp: ENST00000433807.1:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.219G>A
  hgvsp: ENST00000397024.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.396G>A
  hgvsp: ENST00000375604.2:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.138G>A
  hgvsp: ENST00000409954.2:c.138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.219G>A
  hgvsp: ENST00000375597.4:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.315G>A
  hgvsp: ENST00000442652.2:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.8G>A
  hgvsp: ENST00000473345.1:c.8G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.42G>A
  hgvsp: ENST00000486806.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.237G>A
  hgvsp: ENST00000375601.3:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12900
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
hgvs: p.Glu75Glu
num of homozygotes: 7
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

13-113679019-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679019
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679019
    reference: chr 13
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.42G>T
  hgvsp: ENSP00000471913.1:p.Glu14Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.243G>T
  hgvsp: ENSP00000395707.1:p.Glu81Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.315G>T
  hgvsp: ENSP00000401422.2:p.Glu105Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.219G>T
  hgvsp: ENSP00000380219.1:p.Glu73Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.315G>T
  hgvsp: ENSP00000364758.3:p.Glu105Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.219G>T
  hgvsp: ENSP00000364747.4:p.Glu73Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.243G>T
  hgvsp: ENSP00000407722.2:p.Glu81Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.225G>T
  hgvsp: ENSP00000440374.2:p.Glu75Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.138G>T
  hgvsp: ENSP00000386551.2:p.Glu46Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.345G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.219G>T
  hgvsp: ENSP00000405639.2:p.Glu73Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.396G>T
  hgvsp: ENSP00000364754.2:p.Glu132Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.324G>T
  hgvsp: ENSP00000380225.1:p.Glu108Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.237G>T
  hgvsp: ENSP00000364751.3:p.Glu79Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.8G>T
  hgvsp: ENSP00000473071.1:p.Glu3Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.237G>T
  hgvsp: ENSP00000397285.1:p.Glu79Asp
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu75Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

13-113679021-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679021
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679021
    reference: chr 13
allele count: 2
allele frequency: 1.650709805216243e-5
allele num: 121160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.44T>C
  hgvsp: ENSP00000471913.1:p.Ile15Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.221T>C
  hgvsp: ENSP00000380219.1:p.Ile74Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.326T>C
  hgvsp: ENSP00000380225.1:p.Ile109Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.140T>C
  hgvsp: ENSP00000386551.2:p.Ile47Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.221T>C
  hgvsp: ENSP00000405639.2:p.Ile74Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.245T>C
  hgvsp: ENSP00000407722.2:p.Ile82Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.398T>C
  hgvsp: ENSP00000364754.2:p.Ile133Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.239T>C
  hgvsp: ENSP00000397285.1:p.Ile80Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.239T>C
  hgvsp: ENSP00000364751.3:p.Ile80Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.227T>C
  hgvsp: ENSP00000440374.2:p.Ile76Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.317T>C
  hgvsp: ENSP00000401422.2:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.347T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.245T>C
  hgvsp: ENSP00000395707.1:p.Ile82Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.221T>C
  hgvsp: ENSP00000364747.4:p.Ile74Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.317T>C
  hgvsp: ENSP00000364758.3:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.10T>C
  hgvsp: ENSP00000473071.1:p.Ile4Thr
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile76Thr
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

13-113679024-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679024
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679024
    reference: chr 13
allele count: 2
allele frequency: 1.650737054094653e-5
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.320C>T
  hgvsp: ENSP00000364758.3:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.230C>T
  hgvsp: ENSP00000440374.2:p.Pro77Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.47C>T
  hgvsp: ENSP00000471913.1:p.Pro16Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.248C>T
  hgvsp: ENSP00000407722.2:p.Pro83Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.13C>T
  hgvsp: ENSP00000473071.1:p.Pro5Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.224C>T
  hgvsp: ENSP00000364747.4:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.224C>T
  hgvsp: ENSP00000405639.2:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.242C>T
  hgvsp: ENSP00000364751.3:p.Pro81Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.248C>T
  hgvsp: ENSP00000395707.1:p.Pro83Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.329C>T
  hgvsp: ENSP00000380225.1:p.Pro110Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.224C>T
  hgvsp: ENSP00000380219.1:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.401C>T
  hgvsp: ENSP00000364754.2:p.Pro134Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.242C>T
  hgvsp: ENSP00000397285.1:p.Pro81Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.320C>T
  hgvsp: ENSP00000401422.2:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.143C>T
  hgvsp: ENSP00000386551.2:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.350C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro77Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

13-113679025-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679025
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679025
    reference: chr 13
allele count: 4
allele frequency: 3.301528607745386e-5
allele num: 121156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.225G>A
  hgvsp: ENST00000423482.2:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.321G>A
  hgvsp: ENST00000442652.2:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.225G>A
  hgvsp: ENST00000375597.4:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.48G>A
  hgvsp: ENST00000486806.1:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.14G>A
  hgvsp: ENST00000473345.1:c.14G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.144G>A
  hgvsp: ENST00000409954.2:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.225G>A
  hgvsp: ENST00000397024.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.231G>A
  hgvsp: ENST00000535094.2:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.243G>A
  hgvsp: ENST00000421756.1:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.321G>A
  hgvsp: ENST00000375608.3:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.249G>A
  hgvsp: ENST00000433807.1:c.249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.243G>A
  hgvsp: ENST00000375601.3:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.330G>A
  hgvsp: ENST00000397030.1:c.330G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.402G>A
  hgvsp: ENST00000375604.2:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.249G>A
  hgvsp: ENST00000434480.2:c.249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.351G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro77Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

13-113679028-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679028
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679028
    reference: chr 13
allele count: 2
allele frequency: 1.650955077512341e-5
allele num: 121142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.324C>G
  hgvsp: ENSP00000401422.2:p.Asp108Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.246C>G
  hgvsp: ENSP00000397285.1:p.Asp82Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.405C>G
  hgvsp: ENSP00000364754.2:p.Asp135Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.333C>G
  hgvsp: ENSP00000380225.1:p.Asp111Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.246C>G
  hgvsp: ENSP00000364751.3:p.Asp82Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.51C>G
  hgvsp: ENSP00000471913.1:p.Asp17Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.252C>G
  hgvsp: ENSP00000395707.1:p.Asp84Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.324C>G
  hgvsp: ENSP00000364758.3:p.Asp108Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.228C>G
  hgvsp: ENSP00000380219.1:p.Asp76Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.252C>G
  hgvsp: ENSP00000407722.2:p.Asp84Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.234C>G
  hgvsp: ENSP00000440374.2:p.Asp78Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.228C>G
  hgvsp: ENSP00000364747.4:p.Asp76Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.147C>G
  hgvsp: ENSP00000386551.2:p.Asp49Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.354C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.228C>G
  hgvsp: ENSP00000405639.2:p.Asp76Glu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.17C>G
  hgvsp: ENSP00000473071.1:p.Asp6Glu
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp78Glu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

13-113679044-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679044
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679044
    reference: chr 13
allele count: 1
allele frequency: 8.257092842751923e-6
allele num: 121108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.244G>A
  hgvsp: ENSP00000364747.4:p.Val82Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.340G>A
  hgvsp: ENSP00000364758.3:p.Val114Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.370G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.250G>A
  hgvsp: ENSP00000440374.2:p.Val84Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.244G>A
  hgvsp: ENSP00000380219.1:p.Val82Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000395707
  ensembl transcript: ENST00000433807
  gene symbol: MCF2L
  hgvsc: ENST00000433807.1:c.268G>A
  hgvsp: ENSP00000395707.1:p.Val90Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.268G>A
  hgvsp: ENSP00000407722.2:p.Val90Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.244G>A
  hgvsp: ENSP00000405639.2:p.Val82Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.67G>A
  hgvsp: ENSP00000471913.1:p.Val23Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.163G>A
  hgvsp: ENSP00000386551.2:p.Val55Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.421G>A
  hgvsp: ENSP00000364754.2:p.Val141Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.349G>A
  hgvsp: ENSP00000380225.1:p.Val117Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.340G>A
  hgvsp: ENSP00000401422.2:p.Val114Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.262G>A
  hgvsp: ENSP00000397285.1:p.Val88Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.262G>A
  hgvsp: ENSP00000364751.3:p.Val88Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.33G>A
  hgvsp: ENSP00000473071.1:p.Val12Ile
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val84Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/13-113679076-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679076
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679076
    reference: chr 13
allele count: 1
allele frequency: 8.299306178003518e-6
allele num: 120492
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.402C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+4C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+4C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.278+4C>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

13-113679076-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679076
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679076
    reference: chr 13
allele count: 1
allele frequency: 8.299306178003518e-6
allele num: 120492
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.402C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+4C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+4C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.278+4C>T
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

13-113679077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679077
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679077
    reference: chr 13
allele count: 39
allele frequency: 3.238503313238005e-4
allele num: 120426
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.403G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+5G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+5G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12650
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27704
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.278+5G>A
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/13-113679089-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679089
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679089
    reference: chr 13
allele count: 1
allele frequency: 8.369741709770836e-6
allele num: 119478
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.415C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+17C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+17C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

13-113679092-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679092
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679092
    reference: chr 13
allele count: 2
allele frequency: 1.679656006449879e-5
allele num: 119072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.418G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+20G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+20G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25330
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10017
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

13-113679099-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679099
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679099
    reference: chr 13
allele count: 1
allele frequency: 8.418925745074929e-6
allele num: 118780
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.425A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+27A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+27A>G
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

13-113679105-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679105
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679105
    reference: chr 13
allele count: 2
allele frequency: 1.691789744370569e-5
allele num: 118218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.431G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+33G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+33G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7294
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

13-113679105-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679105
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679105
    reference: chr 13
allele count: 1
allele frequency: 8.458948721852847e-6
allele num: 118218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.431G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+33G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+33G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7294
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum

13-113679116-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679116
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679116
    reference: chr 13
allele count: 3
allele frequency: 2.575107296137339e-5
allele num: 116500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.442A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+44A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+44A>G
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10903
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15360
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/13-113679120-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679120
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679120
    reference: chr 13
allele count: 1
allele frequency: 8.625448523323213e-6
allele num: 115936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.446C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+48C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+48C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8702
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

13-113679123-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113679123
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113679123
    reference: chr 13
allele count: 1
allele frequency: 8.679048776254123e-6
allele num: 115220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126217
  ensembl transcript: ENST00000486210
  gene symbol: MCF2L
  hgvsc: ENST00000486210.1:n.449G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.272+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+51G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+51G>C
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

13-113681137-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681137
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681137
    reference: chr 13
allele count: 1
allele frequency: 1.05241001894338e-4
allele num: 9502
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.273-46C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2065C>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2065C>G
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

13-113681170-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681170
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681170
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 14188
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.273-13T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2098T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2098T>C
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 15545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34590
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

13-113681173-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681173
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681173
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 14836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.273-10G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2101G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2101G>C
  variant of: http://identifiers.org/hgnc/14576
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35255
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

13-113681175-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681175
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681175
    reference: chr 13
allele count: 1
allele frequency: 6.551362683438155e-5
allele num: 15264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.273-8C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2103C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2103C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13912
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.273-8C>T
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

13-113681177-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681177
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681177
    reference: chr 13
allele count: 1
allele frequency: 6.28140703517588e-5
allele num: 15920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.273-6C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2105C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2105C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13086
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.273-6C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

13-113681182-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681182
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681182
    reference: chr 13
allele count: 1
allele frequency: 5.609783462358353e-5
allele num: 17826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.273-1G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2110G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2110G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11872
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.273-1G>A
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

13-113681183-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681183
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681183
    reference: chr 13
allele count: 2
allele frequency: 1.114330287497214e-4
allele num: 17948
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.273C>T
  hgvsp: ENST00000397024.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2111C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2111C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11605
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.273C>T
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/13-113681183-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681183
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681183
    reference: chr 13
allele count: 2
allele frequency: 1.114330287497214e-4
allele num: 17948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.273C>A
  hgvsp: ENSP00000380219.1:p.Ser91Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2111C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2111C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35831
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser91Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-113681184-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681184
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681184
    reference: chr 13
allele count: 2
allele frequency: 1.040799333888426e-4
allele num: 19216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.274G>A
  hgvsp: ENSP00000380219.1:p.Gly92Ser
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2112G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2112G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11085
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly92Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

13-113681184-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681184
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681184
    reference: chr 13
allele count: 2
allele frequency: 1.040799333888426e-4
allele num: 19216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.274G>T
  hgvsp: ENSP00000380219.1:p.Gly92Cys
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2112G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2112G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36049
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11085
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly92Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

13-113681185-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681185
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681185
    reference: chr 13
allele count: 1
allele frequency: 5.109339873288371e-5
allele num: 19572
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.275G>T
  hgvsp: ENSP00000380219.1:p.Gly92Val
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2113G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2113G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36042
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10932
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly92Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

13-113681186-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681186
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681186
    reference: chr 13
allele count: 3
allele frequency: 1.514845485760453e-4
allele num: 19804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.276C>T
  hgvsp: ENST00000397024.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2114C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2114C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35927
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly92Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

13-113681187-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681187
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681187
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 21136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2115G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.277G>A
  hgvsp: ENSP00000380219.1:p.Gly93Arg
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2115G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36015
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly93Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

13-113681201-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681201
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681201
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 29142
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.291C>T
  hgvsp: ENST00000397024.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2129C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2129C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35551
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser97Ser
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

13-113681203-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681203
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681203
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 30302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.293T>C
  hgvsp: ENSP00000380219.1:p.Ile98Thr
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2131T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2131T>C
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35455
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile98Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

13-113681203-TCAGGCCGGTGAGCTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681203
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681188
    reference: chr 13
allele count: 1
allele frequency: 3.30011220381493e-5
allele num: 30302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsp: ENSP00000380219.1:p.Pro100_Arg104del
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro100_Arg104del
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: TCAGGCCGGTGAGCTG
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

13-113681209-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681209
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681209
    reference: chr 13
allele count: 1
allele frequency: 2.906131938390003e-5
allele num: 34410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.299C>T
  hgvsp: ENSP00000380219.1:p.Pro100Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2137C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2137C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro100Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-113681210-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681210
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681210
    reference: chr 13
allele count: 2
allele frequency: 5.606323933396872e-5
allele num: 35674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.300G>C
  hgvsp: ENST00000397024.1:c.300G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2138G>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2138G>C
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro100Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

13-113681210-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681210
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681210
    reference: chr 13
allele count: 2
allele frequency: 5.606323933396872e-5
allele num: 35674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.300G>T
  hgvsp: ENST00000397024.1:c.300G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2138G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2138G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8241
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro100Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

13-113681228-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681228
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681228
    reference: chr 13
allele count: 3
allele frequency: 5.892751915144372e-5
allele num: 50910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.318T>C
  hgvsp: ENST00000397024.1:c.318T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2156T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2156T>C
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8131
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr106Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

13-113681234-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681234
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681234
    reference: chr 13
allele count: 1
allele frequency: 1.806227873708547e-5
allele num: 55364
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.324G>T
  hgvsp: ENSP00000380219.1:p.Glu108Asp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2162G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2162G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27132
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu108Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

13-113681235-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681235
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681235
    reference: chr 13
allele count: 2
allele frequency: 3.550253843149785e-5
allele num: 56334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.325G>T
  hgvsp: ENSP00000380219.1:p.Gly109Trp
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2163G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2163G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly109Trp
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

13-113681240-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681240
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681240
    reference: chr 13
allele count: 13
allele frequency: 2.104240854645516e-4
allele num: 61780
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.330C>T
  hgvsp: ENST00000397024.1:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2168C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2168C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14834
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8392
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Cys110Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/13-113681241-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681241
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681241
    reference: chr 13
allele count: 1
allele frequency: 1.572376489826724e-5
allele num: 63598
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.331C>A
  hgvsp: ENSP00000380219.1:p.Arg111Ser
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2169C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2169C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23705
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg111Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

13-113681241-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681241
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681241
    reference: chr 13
allele count: 1
allele frequency: 1.572376489826724e-5
allele num: 63598
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.331C>T
  hgvsp: ENSP00000380219.1:p.Arg111Cys
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2169C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2169C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8253
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg111Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

13-113681242-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681242
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681242
    reference: chr 13
allele count: 6
allele frequency: 9.061254077564335e-5
allele num: 66216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.332G>A
  hgvsp: ENSP00000380219.1:p.Arg111His
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2170G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2170G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17044
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22527
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg111His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

13-113681242-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681242
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681242
    reference: chr 13
allele count: 4
allele frequency: 6.040836051709557e-5
allele num: 66216
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.332G>T
  hgvsp: ENSP00000380219.1:p.Arg111Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2170G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2170G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg111Leu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/13-113681243-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681243
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681243
    reference: chr 13
allele count: 38675
allele frequency: 4.390196835198765e-1
allele num: 88094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.333C>A
  hgvsp: ENST00000397024.1:c.333C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2171C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2171C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 787
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.75e1
  variant carriers: 1328
genotype depth: GenotypeDepth
  all individuals: 9875
  bin: 1.25e1
  variant carriers: 6544
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 11108
  bin: 7.5e0
  variant carriers: 2171
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 2.75e1
  variant carriers: 3988
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 10162
  bin: 1.75e1
  variant carriers: 8605
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 3.25e1
  variant carriers: 2202
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 2.5e0
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 13330
  bin: 2.25e1
  variant carriers: 6742
genotype quality: GenotypeQuality
hgvs: p.Arg111Arg
num of homozygotes: 7393
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

13-113681243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681243
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681243
    reference: chr 13
allele count: 1
allele frequency: 1.135151088609894e-5
allele num: 88094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.333C>T
  hgvsp: ENST00000397024.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2171C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2171C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg111Arg
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/13-113681254-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681254
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681254
    reference: chr 13
allele count: 1
allele frequency: 1.039198570062768e-5
allele num: 96228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.344C>A
  hgvsp: ENSP00000380219.1:p.Ser115Ter
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2182C>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2182C>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19851
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser115Ter
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

13-113681259-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681259
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681259
    reference: chr 13
allele count: 5
allele frequency: 5.105374938735501e-5
allele num: 97936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.349G>A
  hgvsp: ENSP00000380219.1:p.Asp117Asn
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2187G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2187G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22154
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp117Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/13-113681260-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681260
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681260
    reference: chr 13
allele count: 1
allele frequency: 1.016528757598552e-5
allele num: 98374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.350A>C
  hgvsp: ENSP00000380219.1:p.Asp117Ala
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2188A>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2188A>C
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp117Ala
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: A
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-113681267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681267
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681267
    reference: chr 13
allele count: 108
allele frequency: 1.079222959469182e-3
allele num: 100072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.357C>T
  hgvsp: ENST00000397024.1:c.357C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2195C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2195C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6921
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24680
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8382
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 1.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
hgvs: p.Leu119Leu
num of homozygotes: 3
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

13-113681268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681268
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681268
    reference: chr 13
allele count: 4
allele frequency: 3.971721344030503e-5
allele num: 100712
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.358G>A
  hgvsp: ENSP00000380219.1:p.Val120Ile
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2196G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2196G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25480
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val120Ile
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

13-113681268-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681268
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681268
    reference: chr 13
allele count: 1
allele frequency: 9.929303360076257e-6
allele num: 100712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.358G>T
  hgvsp: ENSP00000380219.1:p.Val120Phe
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2196G>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2196G>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val120Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

13-113681272-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681272
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681272
    reference: chr 13
allele count: 14
allele frequency: 1.371150983311134e-4
allele num: 102104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.362C>T
  hgvsp: ENSP00000380219.1:p.Pro121Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2200C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2200C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5477
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27030
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro121Leu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

13-113681275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681275
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681275
    reference: chr 13
allele count: 1
allele frequency: 9.720062208398133e-6
allele num: 102880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.365C>T
  hgvsp: ENSP00000380219.1:p.Ala122Val
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2203C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2203C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27723
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala122Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

13-113681286-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681286
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681286
    reference: chr 13
allele count: 1
allele frequency: 9.510766187324051e-6
allele num: 105144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.376A>G
  hgvsp: ENSP00000380219.1:p.Met126Val
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2214A>G
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2214A>G
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30040
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met126Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

13-113681290-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681290
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681290
    reference: chr 13
allele count: 1
allele frequency: 9.442335656147905e-6
allele num: 105906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2218T>C
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.380T>C
  hgvsp: ENSP00000380219.1:p.Leu127Pro
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2218T>C
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu127Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

13-113681291-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681291
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681291
    reference: chr 13
allele count: 2
allele frequency: 1.887006076159565e-5
allele num: 105988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.381G>A
  hgvsp: ENST00000397024.1:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2219G>A
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2219G>A
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu127Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

13-113681305-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113681305
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113681305
    reference: chr 13
allele count: 3
allele frequency: 2.787637755765764e-5
allele num: 107618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000471913
  ensembl transcript: ENST00000486806
  gene symbol: MCF2L
  hgvsc: ENST00000486806.1:c.95+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000401422
  ensembl transcript: ENST00000442652
  gene symbol: MCF2L
  hgvsc: ENST00000442652.2:c.368+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364754
  ensembl transcript: ENST00000375604
  gene symbol: MCF2L
  hgvsc: ENST00000375604.2:c.449+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380219
  ensembl transcript: ENST00000397024
  gene symbol: MCF2L
  hgvsc: ENST00000397024.1:c.395C>T
  hgvsp: ENSP00000380219.1:p.Ser132Leu
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364747
  ensembl transcript: ENST00000375597
  gene symbol: MCF2L
  hgvsc: ENST00000375597.4:c.272+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000407722
  ensembl transcript: ENST00000434480
  gene symbol: MCF2L
  hgvsc: ENST00000434480.2:c.296+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364751
  ensembl transcript: ENST00000375601
  gene symbol: MCF2L
  hgvsc: ENST00000375601.3:c.290+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000364758
  ensembl transcript: ENST00000375608
  gene symbol: MCF2L
  hgvsc: ENST00000375608.3:c.368+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000386551
  ensembl transcript: ENST00000409954
  gene symbol: MCF2L
  hgvsc: ENST00000409954.2:c.191+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000440374
  ensembl transcript: ENST00000535094
  gene symbol: MCF2L
  hgvsc: ENST00000535094.2:c.278+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000380225
  ensembl transcript: ENST00000397030
  gene symbol: MCF2L
  hgvsc: ENST00000397030.1:c.377+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000397285
  ensembl transcript: ENST00000421756
  gene symbol: MCF2L
  hgvsc: ENST00000421756.1:c.290+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000405639
  ensembl transcript: ENST00000423482
  gene symbol: MCF2L
  hgvsc: ENST00000423482.2:c.272+2233C>T
  variant of: http://identifiers.org/hgnc/14576
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126217
  ensembl protein: ENSP00000473071
  ensembl transcript: ENST00000473345
  gene symbol: MCF2L
  hgvsc: ENST00000473345.1:c.61+2233C>T
  variant of: http://identifiers.org/hgnc/14576
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31644
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ser132Leu
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 212
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13677
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3113
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 27988
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2868
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39973
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.876e0

FS
type: SiteQuality
SIO_000300: 5.91e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 2.628e1

DP
type: SiteQuality
SIO_000300: 1.725234e6

GenotypeDepth
all individuals: 67
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12919
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1171
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 146
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3114
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9437
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2873
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2720
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.457e0

QD
type: SiteQuality
SIO_000300: 1.423e1

DP
type: SiteQuality
SIO_000300: 1.724688e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.906e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

FS
type: SiteQuality
SIO_000300: 4.183e0

MQRankSum
type: SiteQuality
SIO_000300: -9.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.89e-1

GenotypeDepth
all individuals: 146
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27993
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12919
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 601
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 354
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9437
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2873
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2720
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503126503126503e-5
allele num: 66528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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DP
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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African
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Latino
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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MQ
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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DP
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QD
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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FS
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VQSLOD
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 2.313208420078649e-4
allele num: 8646
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ReadPosRankSum
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VQSLOD
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QD
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InbreedingCoeff
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ClippingRankSum
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DP
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SIO_000300: 1.722712e6

FS
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SIO_000300: 2.669e0

MQRankSum
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SIO_000300: 8.42e-1

BaseQRankSum
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SIO_000300: 3.68e0

MQ
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SIO_000300: 5.921e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66528
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Latino
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European (Finnish)
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African
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Other
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East Asian
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South Asian
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
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FS
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DP
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MQ
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele count: 3
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allele num: 10390
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

Other
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allele count: 0
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FS
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 6.03e-1

MQRankSum
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DP
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MQ
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SIO_000300: 5.877e1

InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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BaseQRankSum
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SIO_000300: -7.84e-1

QD
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SIO_000300: 1.179e1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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allele count: 0
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European (Non-Finnish)
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allele count: 2
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allele num: 66518
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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African
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Latino
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East Asian
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.159554730983302e-4
allele num: 8624
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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Other
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InbreedingCoeff
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MQ
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FS
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VQSLOD
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MQRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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East Asian
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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African
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South Asian
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European (Non-Finnish)
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allele frequency: 4.842468448291516e-4
allele num: 66082
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MQ
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MQRankSum
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DP
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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African
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DP
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QD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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Other
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European (Finnish)
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Latino
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South Asian
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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DP
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MQ
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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Other
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East Asian
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European (Finnish)
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European (Non-Finnish)
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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Other
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Latino
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African
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East Asian
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European (Non-Finnish)
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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Latino
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South Asian
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European (Non-Finnish)
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allele num: 63756
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Other
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European (Finnish)
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

South Asian
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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East Asian
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Other
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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MQ
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FS
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 62992
num of homozygotes: 0

Other
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African
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East Asian
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South Asian
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European (Finnish)
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 5580
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East Asian
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South Asian
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African
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Latino
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European (Finnish)
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Other
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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MQ
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FS
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QD
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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African
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South Asian
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FS
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InbreedingCoeff
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QD
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MQ
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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QD
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MQ
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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East Asian
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European (Finnish)
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South Asian
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VQSLOD
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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FS
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MQ
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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East Asian
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MQ
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ClippingRankSum
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European (Non-Finnish)
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FS
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MQRankSum
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DP
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VQSLOD
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MQ
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1614
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.269035532994924e-3
allele num: 1576
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10490
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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FS
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ClippingRankSum
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QD
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 9.40379913485048e-5
allele num: 10634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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South Asian
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FS
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 10780
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African
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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Other
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South Asian
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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QD
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MQ
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SIO_000300: 6.0e1

DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 3654
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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Other
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BaseQRankSum
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ReadPosRankSum
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DP
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FS
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MQRankSum
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QD
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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DP
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BaseQRankSum
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QD
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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Other
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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MQ
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DP
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VQSLOD
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BaseQRankSum
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FS
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.752541184717841e-4
allele num: 5706
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

BaseQRankSum
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SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 4.925e0

InbreedingCoeff
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SIO_000300: 1.57e-2

VQSLOD
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QD
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MQ
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SIO_000300: 6.0e1

MQRankSum
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SIO_000300: 5.73e-1

ReadPosRankSum
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SIO_000300: 1.42e0

DP
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SIO_000300: 5.63384e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2758
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2310
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1778
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.544640098856966e-4
allele num: 6474
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 1.64e0

MQRankSum
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QD
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DP
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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SIO_000300: 1.21e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2488
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6772
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1838
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 1.051193104173237e-4
allele num: 19026
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 1.135e1

ClippingRankSum
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SIO_000300: 9.1e-2

VQSLOD
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SIO_000300: 1.15e0

MQRankSum
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BaseQRankSum
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MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.371e0

InbreedingCoeff
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SIO_000300: 1.45e-2

DP
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SIO_000300: 6.09618e5

ReadPosRankSum
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SIO_000300: -2.96e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2432
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 7.107320540156361e-4
allele num: 2814
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-2

VQSLOD
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SIO_000300: 1.15e0

FS
type: SiteQuality
SIO_000300: 5.371e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.45e-2

QD
type: SiteQuality
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DP
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SIO_000300: 6.09618e5

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 1.32e0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
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allele count: 3
allele frequency: 1.08084738434933e-4
allele num: 27756
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3324
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3834
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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SIO_000300: 1.03e-1

BaseQRankSum
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QD
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InbreedingCoeff
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SIO_000300: -8.699999999999999e-3

DP
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VQSLOD
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SIO_000300: 4.99e0

ClippingRankSum
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SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.295978905735003e-5
allele num: 30340
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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DP
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FS
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BaseQRankSum
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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SIO_000300: -7.3e-3

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 3642
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.045587620242576e-4
allele num: 9564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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QD
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MQRankSum
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DP
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VQSLOD
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MQ
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InbreedingCoeff
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SIO_000300: -6.6e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 2

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 669
bin: 7.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4738
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 3.229011425732737e-3
allele num: 4026
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ReadPosRankSum
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BaseQRankSum
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SIO_000300: -1.2e0

FS
type: SiteQuality
SIO_000300: 1.661e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.179e1

DP
type: SiteQuality
SIO_000300: 8.24377e5

GenotypeDepth
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 710
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.421307506053269e-4
allele num: 4130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35146
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.39787e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

VQSLOD
type: SiteQuality
SIO_000300: 7.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.98e-1

GenotypeDepth
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 5
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GenotypeQuality
all individuals: 661
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GenotypeQuality
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GenotypeQuality
all individuals: 358
bin: 5.75e1
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GenotypeQuality
all individuals: 1959
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 4.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14219
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3544
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.948558067030398e-4
allele num: 5132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

VQSLOD
type: SiteQuality
SIO_000300: 7.15e-1

DP
type: SiteQuality
SIO_000300: 8.39787e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.98e-1

GenotypeDepth
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
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variant carriers: 0

GenotypeDepth
all individuals: 216
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variant carriers: 0

GenotypeDepth
all individuals: 29
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variant carriers: 0

GenotypeDepth
all individuals: 70
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variant carriers: 0

GenotypeDepth
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
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GenotypeQuality
all individuals: 23405
bin: 2.25e1
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GenotypeQuality
all individuals: 1857
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
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GenotypeQuality
all individuals: 754
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variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
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variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1878
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 328
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.75e1
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GenotypeQuality
all individuals: 284
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2528
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16011
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.707092582566324e-4
allele num: 3694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.173941474579042e-5
allele num: 36702
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.912045889101338e-4
allele num: 10460
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

FS
type: SiteQuality
SIO_000300: 6.12e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

VQSLOD
type: SiteQuality
SIO_000300: 7.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

DP
type: SiteQuality
SIO_000300: 8.67418e5

GenotypeDepth
all individuals: 29
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17044
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3014
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 9
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variant carriers: 0

GenotypeDepth
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 2528
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 632
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 7.75e1
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GenotypeQuality
all individuals: 692
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1857
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
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GenotypeQuality
all individuals: 284
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
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GenotypeQuality
all individuals: 2419
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 23405
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16011
bin: 6.25e1
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GenotypeQuality
all individuals: 764
bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.707092582566324e-4
allele num: 3694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.173941474579042e-5
allele num: 36702
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

QD
type: SiteQuality
SIO_000300: 1.27e1

VQSLOD
type: SiteQuality
SIO_000300: 7.98e-1

DP
type: SiteQuality
SIO_000300: 8.67418e5

FS
type: SiteQuality
SIO_000300: 6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeDepth
all individuals: 73
bin: 7.25e1
variant carriers: 63

GenotypeDepth
all individuals: 54
bin: 8.75e1
variant carriers: 53

GenotypeDepth
all individuals: 510
bin: 4.75e1
variant carriers: 456

GenotypeDepth
all individuals: 60
bin: 7.75e1
variant carriers: 54

GenotypeDepth
all individuals: 46
bin: 9.25e1
variant carriers: 43

GenotypeDepth
all individuals: 284
bin: 5.25e1
variant carriers: 249

GenotypeQuality
all individuals: 528
bin: 8.75e1
variant carriers: 479

GenotypeQuality
all individuals: 846
bin: 7.75e1
variant carriers: 617

GenotypeQuality
all individuals: 1444
bin: 3.75e1
variant carriers: 713

GenotypeQuality
all individuals: 9374
bin: 2.25e1
variant carriers: 403

GenotypeQuality
all individuals: 1375
bin: 2.75e1
variant carriers: 330

GenotypeQuality
all individuals: 1245
bin: 4.75e1
variant carriers: 880

GenotypeQuality
all individuals: 641
bin: 7.25e1
variant carriers: 415

GenotypeQuality
all individuals: 493
bin: 1.25e1
variant carriers: 193

GenotypeQuality
all individuals: 1090
bin: 7.5e0
variant carriers: 159

GenotypeQuality
all individuals: 1437
bin: 6.75e1
variant carriers: 672

GenotypeQuality
all individuals: 1774
bin: 3.25e1
variant carriers: 609

GenotypeQuality
all individuals: 1421
bin: 2.5e0
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GenotypeQuality
all individuals: 657
bin: 1.75e1
variant carriers: 300

GenotypeQuality
all individuals: 24535
bin: 9.75e1
variant carriers: 24316

GenotypeQuality
all individuals: 778
bin: 8.25e1
variant carriers: 643

GenotypeQuality
all individuals: 556
bin: 9.25e1
variant carriers: 498

GenotypeQuality
all individuals: 1118
bin: 5.25e1
variant carriers: 861

GenotypeQuality
all individuals: 680
bin: 5.75e1
variant carriers: 521

GenotypeQuality
all individuals: 6955
bin: 6.25e1
variant carriers: 780

GenotypeQuality
all individuals: 845
bin: 4.25e1
variant carriers: 490

Other
type: Population
allele count: 295
allele frequency: 4.46969696969697e-1
allele num: 660
num of homozygotes: 57

East Asian
type: Population
allele count: 2223
allele frequency: 3.479962429555417e-1
allele num: 6388
num of homozygotes: 307

African
type: Population
allele count: 2128
allele frequency: 3.74384236453202e-1
allele num: 5684
num of homozygotes: 335

European (Finnish)
type: Population
allele count: 2438
allele frequency: 4.76171875e-1
allele num: 5120
num of homozygotes: 497

Latino
type: Population
allele count: 2606
allele frequency: 3.418153200419727e-1
allele num: 7624
num of homozygotes: 295

South Asian
type: Population
allele count: 6916
allele frequency: 5.2e-1
allele num: 13300
num of homozygotes: 1712

European (Non-Finnish)
type: Population
allele count: 22069
allele frequency: 4.474836773591792e-1
allele num: 49318
num of homozygotes: 4190

BaseQRankSum
type: SiteQuality
SIO_000300: -1.209e0

VQSLOD
type: SiteQuality
SIO_000300: 5.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

QD
type: SiteQuality
SIO_000300: 1.875e1

DP
type: SiteQuality
SIO_000300: 1.104561e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.52e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 11108
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 95
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2673
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GenotypeDepth
all individuals: 54
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GenotypeDepth
all individuals: 73
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GenotypeQuality
all individuals: 1375
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GenotypeQuality
all individuals: 1774
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GenotypeQuality
all individuals: 556
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GenotypeQuality
all individuals: 778
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GenotypeQuality
all individuals: 1090
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GenotypeQuality
all individuals: 657
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 528
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GenotypeQuality
all individuals: 24535
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1437
bin: 6.75e1
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GenotypeQuality
all individuals: 1245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6955
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
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variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9374
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.759324419422942e-4
allele num: 5684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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InbreedingCoeff
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 53786
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African
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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South Asian
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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DP
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MQ
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 7.357268981753973e-5
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 54680
num of homozygotes: 0

European (Finnish)
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Latino
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East Asian
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Other
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ClippingRankSum
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MQ
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.821427270409093e-5
allele num: 54902
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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African
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allele count: 0
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MQ
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SIO_000300: 5.947e1

QD
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
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num of homozygotes: 0

East Asian
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Latino
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African
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allele count: 98
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allele num: 6590
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European (Non-Finnish)
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Other
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South Asian
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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East Asian
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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MQRankSum
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DP
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Latino
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East Asian
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African
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European (Non-Finnish)
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MQ
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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Other
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Latino
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allele frequency: 1.305483028720627e-3
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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ClippingRankSum
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MQ
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DP
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QD
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VQSLOD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 13938
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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MQRankSum
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FS
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QD
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MQ
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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ReadPosRankSum
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MQRankSum
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QD
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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South Asian
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Latino
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African
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European (Non-Finnish)
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DP
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VQSLOD
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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East Asian
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African
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European (Finnish)
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Latino
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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MQRankSum
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MQ
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QD
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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