11-65315382-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315382
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315382
    reference: chr 11
allele count: 1
allele frequency: 8.43668269636379e-6
allele num: 118530
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.136+9A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1491+9A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.797+9A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.724+9A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1846+9A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1846+9A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1579+9A>C
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35288
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5302
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

11-65315383-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315383
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315383
    reference: chr 11
allele count: 1
allele frequency: 8.43540169382866e-6
allele num: 118548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.724+8C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.136+8C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.797+8C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1579+8C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1846+8C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1846+8C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1491+8C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5302
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3195
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2078
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1846+8C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/11-65315384-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315384
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315384
    reference: chr 11
allele count: 9
allele frequency: 7.592758195960653e-5
allele num: 118534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.724+7G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.797+7G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1846+7G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1846+7G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.136+7G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1579+7G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1491+7G>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3193
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5311
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1846+7G>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-65315384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315384
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315384
    reference: chr 11
allele count: 1
allele frequency: 8.436397995511836e-6
allele num: 118534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1491+7G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1579+7G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.797+7G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.724+7G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.136+7G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1846+7G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1846+7G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1846+7G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

11-65315385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315385
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315385
    reference: chr 11
allele count: 1
allele frequency: 8.43397881384522e-6
allele num: 118568
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.136+6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1846+6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.724+6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1846+6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1579+6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.797+6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1491+6C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1846+6C>T
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum

11-65315385-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315385
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315385
    reference: chr 11
allele count: 3
allele frequency: 2.530193644153566e-5
allele num: 118568
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1846+6C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.136+6C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1846+6C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.724+6C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.797+6C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1579+6C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1491+6C>G
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5312
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1846+6C>G
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-65315388-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315388
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315389
    reference: chr 11
allele count: 1
allele frequency: 8.424174009738345e-6
allele num: 118706
alternate allele: CA
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1846+2dupT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1579+2dupT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.797+2dupT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.724+2dupT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.136+2dupT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1491+2dupT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1846+2dupT
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7400
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1846+2dupT
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

11-65315401-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315401
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315401
    reference: chr 11
allele count: 1
allele frequency: 8.399126490844953e-6
allele num: 119060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1836C>T
  hgvsp: ENST00000322147.4:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.787C>T
  hgvsp: ENST00000526927.1:c.787C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1481C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1569C>T
  hgvsp: ENST00000530866.1:c.1569C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1836C>T
  hgvsp: ENST00000301873.5:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.126C>T
  hgvsp: ENST00000532932.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.714C>T
  hgvsp: ENST00000536982.1:c.714C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg612Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

11-65315403-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315403
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315403
    reference: chr 11
allele count: 1
allele frequency: 8.392923087252828e-6
allele num: 119148
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1834C>T
  hgvsp: ENSP00000301873.5:p.Arg612Cys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1567C>T
  hgvsp: ENSP00000435276.1:p.Arg523Cys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1834C>T
  hgvsp: ENSP00000326647.4:p.Arg612Cys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.124C>T
  hgvsp: ENSP00000435530.1:p.Arg42Cys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.712C>T
  hgvsp: ENSP00000441912.1:p.Arg238Cys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.785C>T
  hgvsp: ENSP00000431219.1:p.Arg263Cys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1479C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2094
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg612Cys
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-65315404-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315404
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315404
    reference: chr 11
allele count: 3
allele frequency: 2.517200872629636e-5
allele num: 119180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.123C>T
  hgvsp: ENST00000532932.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.711C>T
  hgvsp: ENST00000536982.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1833C>T
  hgvsp: ENST00000301873.5:c.1833C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.784C>T
  hgvsp: ENST00000526927.1:c.784C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1833C>T
  hgvsp: ENST00000322147.4:c.1833C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1478C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1566C>T
  hgvsp: ENST00000530866.1:c.1566C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2971
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His611His
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

11-65315406-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315406
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315406
    reference: chr 11
allele count: 1
allele frequency: 8.387291575804341e-6
allele num: 119228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.709C>T
  hgvsp: ENSP00000441912.1:p.His237Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1831C>T
  hgvsp: ENSP00000301873.5:p.His611Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.782C>T
  hgvsp: ENSP00000431219.1:p.His262Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1831C>T
  hgvsp: ENSP00000326647.4:p.His611Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.121C>T
  hgvsp: ENSP00000435530.1:p.His41Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1476C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1564C>T
  hgvsp: ENSP00000435276.1:p.His522Tyr
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7453
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His611Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

11-65315409-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315409
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315409
    reference: chr 11
allele count: 1
allele frequency: 8.382510729613734e-6
allele num: 119296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.706C>T
  hgvsp: ENSP00000441912.1:p.Gln236Ter
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.779C>T
  hgvsp: ENSP00000431219.1:p.Gln261Ter
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1561C>T
  hgvsp: ENSP00000435276.1:p.Gln521Ter
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1473C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1828C>T
  hgvsp: ENSP00000301873.5:p.Gln610Ter
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1828C>T
  hgvsp: ENSP00000326647.4:p.Gln610Ter
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.118C>T
  hgvsp: ENSP00000435530.1:p.Gln40Ter
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7464
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln610Ter
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

11-65315421-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315421
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315421
    reference: chr 11
allele count: 2
allele frequency: 1.673976363453748e-5
allele num: 119476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.767C>T
  hgvsp: ENSP00000431219.1:p.Arg257Trp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1816C>T
  hgvsp: ENSP00000301873.5:p.Arg606Trp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1549C>T
  hgvsp: ENSP00000435276.1:p.Arg517Trp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.106C>T
  hgvsp: ENSP00000435530.1:p.Arg36Trp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1461C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1816C>T
  hgvsp: ENSP00000326647.4:p.Arg606Trp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.694C>T
  hgvsp: ENSP00000441912.1:p.Arg232Trp
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35410
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg606Trp
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

11-65315425-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315425
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315425
    reference: chr 11
allele count: 2
allele frequency: 1.672940192388122e-5
allele num: 119550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1545C>A
  hgvsp: ENST00000530866.1:c.1545C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1812C>A
  hgvsp: ENST00000322147.4:c.1812C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1812C>A
  hgvsp: ENST00000301873.5:c.1812C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.763C>A
  hgvsp: ENST00000526927.1:c.763C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.102C>A
  hgvsp: ENST00000532932.1:c.102C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.690C>A
  hgvsp: ENST00000536982.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1457C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2986
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3246
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35512
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly604Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP

11-65315435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315435
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315435
    reference: chr 11
allele count: 1
allele frequency: 8.361343835181191e-6
allele num: 119598
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.92G>A
  hgvsp: ENSP00000435530.1:p.Cys31Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.680G>A
  hgvsp: ENSP00000441912.1:p.Cys227Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1802G>A
  hgvsp: ENSP00000326647.4:p.Cys601Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1447G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1802G>A
  hgvsp: ENSP00000301873.5:p.Cys601Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1535G>A
  hgvsp: ENSP00000435276.1:p.Cys512Tyr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.753G>A
  hgvsp: ENSP00000431219.1:p.Cys252Tyr
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35059
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys601Tyr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

11-65315438-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315438
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315438
    reference: chr 11
allele count: 1
allele frequency: 8.363861427543869e-6
allele num: 119562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1532A>T
  hgvsp: ENSP00000435276.1:p.His511Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1799A>T
  hgvsp: ENSP00000326647.4:p.His600Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1799A>T
  hgvsp: ENSP00000301873.5:p.His600Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.89A>T
  hgvsp: ENSP00000435530.1:p.His30Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.677A>T
  hgvsp: ENSP00000441912.1:p.His226Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1444A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.750A>T
  hgvsp: ENSP00000431219.1:p.His251Leu
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7328
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His600Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

11-65315441-CAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315441
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315438
    reference: chr 11
allele count: 1
allele frequency: 8.35812911637859e-6
allele num: 119644
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1793_1795delCCT
  hgvsp: ENSP00000301873.5:p.Ser598del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1526_1528delCCT
  hgvsp: ENSP00000435276.1:p.Ser509del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1793_1795delCCT
  hgvsp: ENSP00000326647.4:p.Ser598del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.744_746delCCT
  hgvsp: ENSP00000431219.1:p.Ser249del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1438_*1440delCCT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.550_552delCCT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.671_673delCCT
  hgvsp: ENSP00000441912.1:p.Ser224del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.83_85delCCT
  hgvsp: ENSP00000435530.1:p.Ser28del
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2953
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5333
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser598del
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CAGG
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-65315444-GAGTAGTCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315444
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315436
    reference: chr 11
allele count: 2
allele frequency: 1.670285618840822e-5
allele num: 119740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsp: ENSP00000435276.1:p.Asp507LeufsTer192
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.736_743delTGACTACT
  hgvsp: ENSP00000431219.1:p.Asp247LeufsTer192
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.663_670delTGACTACT
  hgvsp: ENSP00000441912.1:p.Asp222LeufsTer192
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.542_549delTGACTACT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsp: ENSP00000301873.5:p.Asp596LeufsTer192
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.75_82delTGACTACT
  hgvsp: ENSP00000435530.1:p.Asp26LeufsTer192
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsp: ENSP00000326647.4:p.Asp596LeufsTer192
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35056
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2102
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3231
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp596LeufsTer192
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: GAGTAGTCA
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

11-65315445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315445
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315445
    reference: chr 11
allele count: 508
allele frequency: 4.558588632243938e-3
allele num: 111438
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.743T>C
  hgvsp: ENSP00000431219.1:p.Ser249Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.549T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1525T>C
  hgvsp: ENSP00000435276.1:p.Ser509Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.82T>C
  hgvsp: ENSP00000435530.1:p.Ser28Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1792T>C
  hgvsp: ENSP00000301873.5:p.Ser598Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1792T>C
  hgvsp: ENSP00000326647.4:p.Ser598Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1437T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.670T>C
  hgvsp: ENSP00000441912.1:p.Ser224Pro
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 3.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28917
  bin: 2.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 13680
  bin: 2.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3951
  bin: 2.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 2.25e1
  variant carriers: 2
hgvs: p.Ser598Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

11-65315447-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315447
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315447
    reference: chr 11
allele count: 1
allele frequency: 8.531986417077625e-6
allele num: 117206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1790A>T
  hgvsp: ENSP00000326647.4:p.Tyr597Phe
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1790A>T
  hgvsp: ENSP00000301873.5:p.Tyr597Phe
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.668A>T
  hgvsp: ENSP00000441912.1:p.Tyr223Phe
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1523A>T
  hgvsp: ENSP00000435276.1:p.Tyr508Phe
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.741A>T
  hgvsp: ENSP00000431219.1:p.Tyr248Phe
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.547A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1435A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.80A>T
  hgvsp: ENSP00000435530.1:p.Tyr27Phe
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 28834
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6336
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr597Phe
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-65315447-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315447
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315447
    reference: chr 11
allele count: 420
allele frequency: 3.583434295172602e-3
allele num: 117206
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1790A>C
  hgvsp: ENSP00000301873.5:p.Tyr597Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1790A>C
  hgvsp: ENSP00000326647.4:p.Tyr597Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.741A>C
  hgvsp: ENSP00000431219.1:p.Tyr248Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.80A>C
  hgvsp: ENSP00000435530.1:p.Tyr27Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1435A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.547A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1523A>C
  hgvsp: ENSP00000435276.1:p.Tyr508Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.668A>C
  hgvsp: ENSP00000441912.1:p.Tyr223Ser
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 5.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 13641
  bin: 2.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 28834
  bin: 2.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6336
  bin: 9.75e1
  variant carriers: 355
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 2.5e0
  variant carriers: 3
hgvs: p.Tyr597Ser
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

11-65315448-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315448
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315448
    reference: chr 11
allele count: 2
allele frequency: 1.67117884956048e-5
allele num: 119676
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1434T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1789T>C
  hgvsp: ENSP00000301873.5:p.Tyr597His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.79T>C
  hgvsp: ENSP00000435530.1:p.Tyr27His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1789T>C
  hgvsp: ENSP00000326647.4:p.Tyr597His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1522T>C
  hgvsp: ENSP00000435276.1:p.Tyr508His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.667T>C
  hgvsp: ENSP00000441912.1:p.Tyr223His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.740T>C
  hgvsp: ENSP00000431219.1:p.Tyr248His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.546T>C
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 28867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr597His
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

11-65315448-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315448
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315448
    reference: chr 11
allele count: 1
allele frequency: 8.3558942478024e-6
allele num: 119676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1789T>A
  hgvsp: ENSP00000326647.4:p.Tyr597Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1434T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.740T>A
  hgvsp: ENSP00000431219.1:p.Tyr248Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.667T>A
  hgvsp: ENSP00000441912.1:p.Tyr223Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1789T>A
  hgvsp: ENSP00000301873.5:p.Tyr597Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.546T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1522T>A
  hgvsp: ENSP00000435276.1:p.Tyr508Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.79T>A
  hgvsp: ENSP00000435530.1:p.Tyr27Asn
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6524
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr597Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-65315449-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315449
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315449
    reference: chr 11
allele count: 4
allele frequency: 3.341408403642135e-5
allele num: 119710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.545C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1788C>A
  hgvsp: ENSP00000301873.5:p.Asp596Glu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.78C>A
  hgvsp: ENSP00000435530.1:p.Asp26Glu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.739C>A
  hgvsp: ENSP00000431219.1:p.Asp247Glu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.666C>A
  hgvsp: ENSP00000441912.1:p.Asp222Glu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1433C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1521C>A
  hgvsp: ENSP00000435276.1:p.Asp507Glu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1788C>A
  hgvsp: ENSP00000326647.4:p.Asp596Glu
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6526
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp596Glu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

11-65315450-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315450
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315450
    reference: chr 11
allele count: 4
allele frequency: 3.344201989800184e-5
allele num: 119610
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1432A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1787A>C
  hgvsp: ENSP00000301873.5:p.Asp596Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.738A>C
  hgvsp: ENSP00000431219.1:p.Asp247Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1787A>C
  hgvsp: ENSP00000326647.4:p.Asp596Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1520A>C
  hgvsp: ENSP00000435276.1:p.Asp507Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.544A>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.77A>C
  hgvsp: ENSP00000435530.1:p.Asp26Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.665A>C
  hgvsp: ENSP00000441912.1:p.Asp222Ala
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33181
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp596Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

11-65315453-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315453
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315453
    reference: chr 11
allele count: 2
allele frequency: 1.672100994900092e-5
allele num: 119610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1784C>A
  hgvsp: ENSP00000326647.4:p.Pro595His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1784C>A
  hgvsp: ENSP00000301873.5:p.Pro595His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.735C>A
  hgvsp: ENSP00000431219.1:p.Pro246His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.662C>A
  hgvsp: ENSP00000441912.1:p.Pro221His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1429C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1517C>A
  hgvsp: ENSP00000435276.1:p.Pro506His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.74C>A
  hgvsp: ENSP00000435530.1:p.Pro25His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.541C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14015
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3289
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro595His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

11-65315458-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315458
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315458
    reference: chr 11
allele count: 1
allele frequency: 8.342370901810295e-6
allele num: 119870
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1779C>A
  hgvsp: ENST00000301873.5:c.1779C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.657C>A
  hgvsp: ENST00000536982.1:c.657C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.69C>A
  hgvsp: ENST00000532932.1:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.730C>A
  hgvsp: ENST00000526927.1:c.730C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1779C>A
  hgvsp: ENST00000322147.4:c.1779C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1512C>A
  hgvsp: ENST00000530866.1:c.1512C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1424C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.536C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly593Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

11-65315459-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315459
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315459
    reference: chr 11
allele count: 1
allele frequency: 8.368901163277262e-6
allele num: 119490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.535G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1511G>A
  hgvsp: ENSP00000435276.1:p.Gly504Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.656G>A
  hgvsp: ENSP00000441912.1:p.Gly219Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1423G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.729G>A
  hgvsp: ENSP00000431219.1:p.Gly244Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1778G>A
  hgvsp: ENSP00000326647.4:p.Gly593Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1778G>A
  hgvsp: ENSP00000301873.5:p.Gly593Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.68G>A
  hgvsp: ENSP00000435530.1:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3286
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly593Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

11-65315466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315466
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315466
    reference: chr 11
allele count: 1
allele frequency: 8.327504080476999e-6
allele num: 120084
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.649G>A
  hgvsp: ENSP00000441912.1:p.Val217Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.61G>A
  hgvsp: ENSP00000435530.1:p.Val21Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.528G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.722G>A
  hgvsp: ENSP00000431219.1:p.Val242Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1504G>A
  hgvsp: ENSP00000435276.1:p.Val502Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1771G>A
  hgvsp: ENSP00000326647.4:p.Val591Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1416G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1771G>A
  hgvsp: ENSP00000301873.5:p.Val591Met
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2259
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val591Met
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ

11-65315467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315467
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315467
    reference: chr 11
allele count: 1
allele frequency: 8.324592511196577e-6
allele num: 120126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.721C>T
  hgvsp: ENST00000526927.1:c.721C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1503C>T
  hgvsp: ENST00000530866.1:c.1503C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.527C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1770C>T
  hgvsp: ENST00000322147.4:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1415C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1770C>T
  hgvsp: ENST00000301873.5:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.648C>T
  hgvsp: ENST00000536982.1:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.60C>T
  hgvsp: ENST00000532932.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys590Cys
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

11-65315475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315475
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315475
    reference: chr 11
allele count: 1
allele frequency: 8.315316813570598e-6
allele num: 120260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.52G>A
  hgvsp: ENSP00000435530.1:p.Gly18Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.640G>A
  hgvsp: ENSP00000441912.1:p.Gly214Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.713G>A
  hgvsp: ENSP00000431219.1:p.Gly239Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1495G>A
  hgvsp: ENSP00000435276.1:p.Gly499Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.519G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1762G>A
  hgvsp: ENSP00000301873.5:p.Gly588Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1762G>A
  hgvsp: ENSP00000326647.4:p.Gly588Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1407G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3034
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly588Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

11-65315485-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315485
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315485
    reference: chr 11
allele count: 1
allele frequency: 8.307579835842223e-6
allele num: 120372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1485C>T
  hgvsp: ENST00000530866.1:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1752C>T
  hgvsp: ENST00000322147.4:c.1752C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.509C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1397C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1752C>T
  hgvsp: ENST00000301873.5:c.1752C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.630C>T
  hgvsp: ENST00000536982.1:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.42C>T
  hgvsp: ENST00000532932.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.703C>T
  hgvsp: ENST00000526927.1:c.703C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile584Ile
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/11-65315501-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315501
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315501
    reference: chr 11
allele count: 1
allele frequency: 8.306337735692333e-6
allele num: 120390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.517G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.687G>T
  hgvsp: ENSP00000431219.1:p.Arg230Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.614G>T
  hgvsp: ENSP00000441912.1:p.Arg205Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1469G>T
  hgvsp: ENSP00000435276.1:p.Arg490Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1736G>T
  hgvsp: ENSP00000326647.4:p.Arg579Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1736G>T
  hgvsp: ENSP00000301873.5:p.Arg579Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.26G>T
  hgvsp: ENSP00000435530.1:p.Arg9Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.493G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1381G>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg579Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

11-65315501-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315501
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315501
    reference: chr 11
allele count: 1
allele frequency: 8.306337735692333e-6
allele num: 120390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1381G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1469G>A
  hgvsp: ENSP00000435276.1:p.Arg490Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.26G>A
  hgvsp: ENSP00000435530.1:p.Arg9Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1736G>A
  hgvsp: ENSP00000326647.4:p.Arg579Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.493G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.687G>A
  hgvsp: ENSP00000431219.1:p.Arg230Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1736G>A
  hgvsp: ENSP00000301873.5:p.Arg579Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.517G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.614G>A
  hgvsp: ENSP00000441912.1:p.Arg205Gln
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6607
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7416
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg579Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

11-65315502-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315502
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315502
    reference: chr 11
allele count: 1
allele frequency: 8.306337735692333e-6
allele num: 120390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1735C>G
  hgvsp: ENSP00000326647.4:p.Arg579Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.613C>G
  hgvsp: ENSP00000441912.1:p.Arg205Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1380C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.25C>G
  hgvsp: ENSP00000435530.1:p.Arg9Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1468C>G
  hgvsp: ENSP00000435276.1:p.Arg490Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.492C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.686C>G
  hgvsp: ENSP00000431219.1:p.Arg230Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1735C>G
  hgvsp: ENSP00000301873.5:p.Arg579Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.516C>G
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2266
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg579Gly
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-65315503-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315503
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315503
    reference: chr 11
allele count: 1
allele frequency: 8.306889734345666e-6
allele num: 120382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1379C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1467C>T
  hgvsp: ENST00000530866.1:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.612C>T
  hgvsp: ENST00000536982.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1734C>T
  hgvsp: ENST00000322147.4:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.685C>T
  hgvsp: ENST00000526927.1:c.685C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.24C>T
  hgvsp: ENST00000532932.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.491C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1734C>T
  hgvsp: ENST00000301873.5:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.515C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Cys578Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

11-65315506-CTCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315506
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315503
    reference: chr 11
allele count: 4
allele frequency: 3.322700691121744e-5
allele num: 120384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1461_1463delTGA
  hgvsp: ENSP00000435276.1:p.Asp487del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.509_511delTGA
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1728_1730delTGA
  hgvsp: ENSP00000301873.5:p.Asp576del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1373_*1375delTGA
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.606_608delTGA
  hgvsp: ENSP00000441912.1:p.Asp202del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1728_1730delTGA
  hgvsp: ENSP00000326647.4:p.Asp576del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.679_681delTGA
  hgvsp: ENSP00000431219.1:p.Asp227del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.485_487delTGA
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.18_20delTGA
  hgvsp: ENSP00000435530.1:p.Asp6del
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp576del
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: CTCA
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

11-65315514-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315514
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315514
    reference: chr 11
allele count: 1
allele frequency: 8.308546170591069e-6
allele num: 120358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.504A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.601A>G
  hgvsp: ENSP00000441912.1:p.Thr201Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1456A>G
  hgvsp: ENSP00000435276.1:p.Thr486Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.13A>G
  hgvsp: ENSP00000435530.1:p.Thr5Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1368A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1723A>G
  hgvsp: ENSP00000326647.4:p.Thr575Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.674A>G
  hgvsp: ENSP00000431219.1:p.Thr226Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1723A>G
  hgvsp: ENSP00000301873.5:p.Thr575Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.480A>G
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr575Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-65315519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315519
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315519
    reference: chr 11
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-3C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-3C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-3C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-3C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-3C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-3C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-3C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.8C>T
  hgvsp: ENSP00000435530.1:p.Ala3Val
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-3C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3038
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala3Val
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

11-65315519-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315519
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315519
    reference: chr 11
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-3C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-3C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-3C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-3C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.8C>A
  hgvsp: ENSP00000435530.1:p.Ala3Glu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-3C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-3C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-3C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-3C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala3Glu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

11-65315520-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315520
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315520
    reference: chr 11
allele count: 15
allele frequency: 1.246924253508014e-4
allele num: 120296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.7G>A
  hgvsp: ENSP00000435530.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-4G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala3Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

11-65315522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315522
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315522
    reference: chr 11
allele count: 1
allele frequency: 8.312275568559649e-6
allele num: 120304
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.5C>T
  hgvsp: ENSP00000435530.1:p.Pro2Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-6C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-6C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro2Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

11-65315523-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315523
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315523
    reference: chr 11
allele count: 1
allele frequency: 8.312413758707254e-6
allele num: 120302
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-7C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-7C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.4C>G
  hgvsp: ENSP00000435530.1:p.Pro2Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-7C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-7C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-7C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-7C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-7C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-7C>G
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro2Ala
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

11-65315539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315539
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315539
    reference: chr 11
allele count: 1
allele frequency: 8.319744417451495e-6
allele num: 120196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-23G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6476
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

11-65315540-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315540
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315540
    reference: chr 11
allele count: 3
allele frequency: 2.496214075319099e-5
allele num: 120182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-24C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-24C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-24C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-24C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-24C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-24C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-24C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-24C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3011
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-65315543-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315543
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315543
    reference: chr 11
allele count: 104
allele frequency: 8.653110127466968e-4
allele num: 120188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-17T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-27T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-27T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-27T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-27T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-27T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-27T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-27T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-27T>C
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6435
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28676
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

11-65315545-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315545
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315545
    reference: chr 11
allele count: 1
allele frequency: 8.321405984755183e-6
allele num: 120172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-29T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-29T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-29T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-29T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-29T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-19T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-29T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-29T>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-29T>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-65315549-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315549
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315549
    reference: chr 11
allele count: 2
allele frequency: 1.664475107774763e-5
allele num: 120158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-23C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-33C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-33C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-33C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-33C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-33C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-33C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-33C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-33C>G
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7248
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2265
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-65315550-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315550
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315550
    reference: chr 11
allele count: 1
allele frequency: 8.322929671244279e-6
allele num: 120150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-34C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-34C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-34C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-34C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-34C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-34C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-34C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-34C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

11-65315553-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315553
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315553
    reference: chr 11
allele count: 1
allele frequency: 8.324592511196577e-6
allele num: 120126
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-37C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-27C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-37C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-37C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-37C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-37C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-37C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-37C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-37C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3340
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33240
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

11-65315554-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315554
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315554
    reference: chr 11
allele count: 208
allele frequency: 1.732322811693179e-3
allele num: 120070
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-38G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-38G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-38G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-38G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-38G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-38G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-38G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-38G>C
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 28321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 13866
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7183
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32838
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

11-65315554-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315554
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315554
    reference: chr 11
allele count: 1
allele frequency: 8.328475056217207e-6
allele num: 120070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-38G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-38G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-38G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-38G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-38G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-38G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-38G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-38G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

11-65315555-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315555
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315555
    reference: chr 11
allele count: 3
allele frequency: 2.498792250412301e-5
allele num: 120058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-39C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-39C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-39C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-39C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-39C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-39C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-39C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-39C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2981
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

11-65315556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315556
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315556
    reference: chr 11
allele count: 1
allele frequency: 8.327226700419692e-6
allele num: 120088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-30G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-40G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-40G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-40G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-40G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-40G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-40G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-40G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-40G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

11-65315566-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315566
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315566
    reference: chr 11
allele count: 11
allele frequency: 9.165291872885734e-5
allele num: 120018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-40C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-50C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-50C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-50C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-50C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-50C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-50C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-50C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-50C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS

11-65315568-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65315568
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65315568
    reference: chr 11
allele count: 2
allele frequency: 1.666472244904761e-5
allele num: 120014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.502-52G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1721-52G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.599-52G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.672-52G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1366-52G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1454-52G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.478-52G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.-42G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1721-52G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6768
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

11-65318552-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318552
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318552
    reference: chr 11
allele count: 1
allele frequency: 5.042355788624445e-5
allele num: 19832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1720+45C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.501+45C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.598+45C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1365+45C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.671+45C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1453+45C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1720+45C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.477+45C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1682
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7836
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

11-65318571-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318571
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318571
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 19954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.598+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1453+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.477+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1720+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1365+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.501+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1720+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.671+26C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35762
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

11-65318576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318576
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318576
    reference: chr 11
allele count: 1
allele frequency: 4.987033712347896e-5
allele num: 20052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1453+21C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1365+21C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.671+21C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.598+21C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1720+21C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1720+21C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.501+21C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.477+21C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

11-65318599-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318599
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318599
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 20532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.669C>T
  hgvsp: ENSP00000431219.1:p.Thr224Ile
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.499C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1451C>T
  hgvsp: ENSP00000435276.1:p.Thr484Ile
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.475C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1718C>T
  hgvsp: ENSP00000301873.5:p.Thr573Ile
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1718C>T
  hgvsp: ENSP00000326647.4:p.Thr573Ile
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1363C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.596C>T
  hgvsp: ENSP00000441912.1:p.Thr199Ile
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33883
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10071
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8085
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr573Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

11-65318630-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318630
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318630
    reference: chr 11
allele count: 1
allele frequency: 4.785604900459418e-5
allele num: 20896
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1687A>G
  hgvsp: ENSP00000301873.5:p.Ser563Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1420A>G
  hgvsp: ENSP00000435276.1:p.Ser474Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.565A>G
  hgvsp: ENSP00000441912.1:p.Ser189Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1687A>G
  hgvsp: ENSP00000326647.4:p.Ser563Gly
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.444A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1332A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.468A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.638A>G
  hgvsp: ENSP00000431219.1:p.Ser214Gly
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8947
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31588
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser563Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-65318670-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318670
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318670
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 20322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.598G>A
  hgvsp: ENST00000526927.1:c.598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.525G>A
  hgvsp: ENST00000536982.1:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.428G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1380G>A
  hgvsp: ENST00000530866.1:c.1380G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1292G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1647G>A
  hgvsp: ENST00000322147.4:c.1647G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.404G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1647G>A
  hgvsp: ENST00000301873.5:c.1647G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35882
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32783
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2106
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro549Pro
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

11-65318671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318671
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318671
    reference: chr 11
allele count: 1
allele frequency: 4.936808846761453e-5
allele num: 20256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.403C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.524C>T
  hgvsp: ENSP00000441912.1:p.Pro175Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.597C>T
  hgvsp: ENSP00000431219.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1646C>T
  hgvsp: ENSP00000301873.5:p.Pro549Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1646C>T
  hgvsp: ENSP00000326647.4:p.Pro549Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1379C>T
  hgvsp: ENSP00000435276.1:p.Pro460Leu
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.427C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1291C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35962
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3507
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32799
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro549Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP

11-65318672-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318672
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318672
    reference: chr 11
allele count: 1
allele frequency: 4.936808846761453e-5
allele num: 20256
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.596C>G
  hgvsp: ENSP00000431219.1:p.Pro200Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1290C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.523C>G
  hgvsp: ENSP00000441912.1:p.Pro175Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.402C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1645C>G
  hgvsp: ENSP00000326647.4:p.Pro549Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1378C>G
  hgvsp: ENSP00000435276.1:p.Pro460Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1645C>G
  hgvsp: ENSP00000301873.5:p.Pro549Ala
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.426C>G
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4606
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro549Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

11-65318687-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318687
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318687
    reference: chr 11
allele count: 1
allele frequency: 4.963271788763152e-5
allele num: 20148
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1630T>C
  hgvsp: ENSP00000301873.5:p.Ser544Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1630T>C
  hgvsp: ENSP00000326647.4:p.Ser544Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.387T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.508T>C
  hgvsp: ENSP00000441912.1:p.Ser170Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.581T>C
  hgvsp: ENSP00000431219.1:p.Ser195Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1363T>C
  hgvsp: ENSP00000435276.1:p.Ser455Pro
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.411T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1275T>C
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33634
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4721
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser544Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

11-65318688-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318688
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318688
    reference: chr 11
allele count: 2
allele frequency: 9.943323058566172e-5
allele num: 20114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.410C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1629C>T
  hgvsp: ENST00000322147.4:c.1629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.580C>T
  hgvsp: ENST00000526927.1:c.580C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1274C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1629C>T
  hgvsp: ENST00000301873.5:c.1629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1362C>T
  hgvsp: ENST00000530866.1:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.507C>T
  hgvsp: ENST00000536982.1:c.507C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.386C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36256
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4369
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5039
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3297
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile543Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

11-65318699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318699
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318699
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 19976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.403-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1355-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1267-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1622-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1622-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.379-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.500-4G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.573-4G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32402
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1622-4G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

11-65318699-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318699
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318698
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 19976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1622-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.500-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1267-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.403-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1622-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1355-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.379-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.573-5delC
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1622-5delC
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: CG
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

11-65318700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318700
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318700
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 19934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1267-5C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.379-5C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.573-5C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1622-5C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.500-5C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.403-5C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1355-5C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1622-5C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6462
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36112
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32210
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5038
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4151
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1622-5C>T
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

11-65318703-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318703
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318703
    reference: chr 11
allele count: 1
allele frequency: 5.019576347756249e-5
allele num: 19922
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1622-8G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1355-8G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.403-8G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.379-8G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1267-8G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1622-8G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.573-8G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.500-8G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32318
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1649
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3973
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1622-8G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-65318704-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65318704
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65318704
    reference: chr 11
allele count: 1
allele frequency: 5.01353654868144e-5
allele num: 19946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.1355-9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.1622-9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.573-9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529764
  gene symbol: LTBP3
  hgvsc: ENST00000529764.1:n.403-9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.500-9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.1622-9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*1267-9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000528966
  gene symbol: LTBP3
  hgvsc: ENST00000528966.1:n.379-9C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 880
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7370
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.885e1

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-1

DP
type: SiteQuality
SIO_000300: 1.661247e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 2.021e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.024e0

QD
type: SiteQuality
SIO_000300: 1.459e1

VQSLOD
type: SiteQuality
SIO_000300: -6.805e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.416e0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7379
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35309
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2950
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544735541275334e-5
allele num: 64736
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.661712e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.265e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.24e1

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737619461337967e-4
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.724632307502162e-5
allele num: 64728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9820
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

DP
type: SiteQuality
SIO_000300: 1.66253e6

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

FS
type: SiteQuality
SIO_000300: 1.733e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.53e-1

GenotypeQuality
all individuals: 880
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3193
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5311
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64728
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.018329938900204e-4
allele num: 9820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

DP
type: SiteQuality
SIO_000300: 1.66253e6

FS
type: SiteQuality
SIO_000300: 1.733e0

QD
type: SiteQuality
SIO_000300: 1.307e1

GenotypeQuality
all individuals: 218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35237
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5312
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64744
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-1

DP
type: SiteQuality
SIO_000300: 1.663251e6

FS
type: SiteQuality
SIO_000300: 1.108e0

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.184e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 225
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35237
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64744
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.03210729526519e-4
allele num: 9842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.108e0

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

DP
type: SiteQuality
SIO_000300: 1.663251e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.184e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

GenotypeQuality
all individuals: 35452
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5312
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2951
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542448173741362e-5
allele num: 64832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.312e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.189e0

DP
type: SiteQuality
SIO_000300: 1.664798e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

FS
type: SiteQuality
SIO_000300: 4.383e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

QD
type: SiteQuality
SIO_000300: 1.586e1

GenotypeQuality
all individuals: 1310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7455
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35629
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5314
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537562655678219e-5
allele num: 65038
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e0

ReadPosRankSum
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SIO_000300: -2.421e0

DP
type: SiteQuality
SIO_000300: 1.669708e6

FS
type: SiteQuality
SIO_000300: 1.5144e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.18e0

QD
type: SiteQuality
SIO_000300: 1.172e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536381514257621e-5
allele num: 65088
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.676e1

MQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

FS
type: SiteQuality
SIO_000300: 8.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.335e0

DP
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SIO_000300: 1.670962e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.646e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535909565644775e-5
allele num: 65108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.302e1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.671579e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.464e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 2.436e0

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.63e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 175
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534872298624754e-5
allele num: 65152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.612e0

DP
type: SiteQuality
SIO_000300: 1.672021e6

VQSLOD
type: SiteQuality
SIO_000300: -1.311e0

FS
type: SiteQuality
SIO_000300: 2.547e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

MQ
type: SiteQuality
SIO_000300: 5.852e1

QD
type: SiteQuality
SIO_000300: 1.364e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

GenotypeQuality
all individuals: 2093
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533883486210388e-5
allele num: 65194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.654e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.583e0

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

FS
type: SiteQuality
SIO_000300: 1.1065e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.259e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.479e1

DP
type: SiteQuality
SIO_000300: 1.673074e6

GenotypeQuality
all individuals: 133
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 3240
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.062505742198267e-5
allele num: 65306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.69e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.308e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.674247e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530128224745234e-5
allele num: 65354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e0

FS
type: SiteQuality
SIO_000300: 1.0305e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.67485e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65400
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.87e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.323e0

ReadPosRankSum
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.379e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

DP
type: SiteQuality
SIO_000300: 1.676807e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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East Asian
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allele count: 1
allele frequency: 1.163602513381429e-4
allele num: 8594
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16510
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MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

QD
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FS
type: SiteQuality
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DP
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MQ
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.25e0

MQRankSum
type: SiteQuality
SIO_000300: -4.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

DP
type: SiteQuality
SIO_000300: 1.680779e6

MQ
type: SiteQuality
SIO_000300: 5.916e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.616e0

QD
type: SiteQuality
SIO_000300: 1.147e1

GenotypeQuality
all individuals: 345
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5336
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7363
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526577718071627e-5
allele num: 65506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.877518767285657e-5
allele num: 10124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.194e0

DP
type: SiteQuality
SIO_000300: 1.681913e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

FS
type: SiteQuality
SIO_000300: 8.055e1

MQRankSum
type: SiteQuality
SIO_000300: -1.167e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.901e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e0

QD
type: SiteQuality
SIO_000300: 3.58e0

VQSLOD
type: SiteQuality
SIO_000300: -1.183e1

MQ
type: SiteQuality
SIO_000300: 5.698e1

GenotypeQuality
all individuals: 811
bin: 8.75e1
variant carriers: 10

GenotypeQuality
all individuals: 199
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2747
bin: 7.25e1
variant carriers: 10

GenotypeQuality
all individuals: 169
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 5649
bin: 9.75e1
variant carriers: 384

GenotypeQuality
all individuals: 184
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 180
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 150
bin: 4.25e1
variant carriers: 9

GenotypeQuality
all individuals: 6750
bin: 6.75e1
variant carriers: 8

GenotypeQuality
all individuals: 857
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1972
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3043
bin: 7.75e1
variant carriers: 15

GenotypeQuality
all individuals: 32237
bin: 6.25e1
variant carriers: 9

GenotypeQuality
all individuals: 236
bin: 3.25e1
variant carriers: 9

African
type: Population
allele count: 97
allele frequency: 1.117511520737327e-2
allele num: 8680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 310
allele frequency: 5.126000396851644e-3
allele num: 60476
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.856041131105398e-3
allele num: 778
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.820167455405897e-4
allele num: 16482
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.072961373390558e-3
allele num: 8388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 81
allele frequency: 1.524849397590361e-2
allele num: 5312
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.416180886769122e-4
allele num: 11322
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.763383e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.644e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.85e0

MQ
type: SiteQuality
SIO_000300: 5.85e1

FS
type: SiteQuality
SIO_000300: 2.64103e2

VQSLOD
type: SiteQuality
SIO_000300: -3.22e2

QD
type: SiteQuality
SIO_000300: 3.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.56e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.182e0

GenotypeQuality
all individuals: 273
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6933
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32464
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562841871659425e-5
allele num: 63986
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.735732e6

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.7871e2

VQSLOD
type: SiteQuality
SIO_000300: -1.472e2

MQ
type: SiteQuality
SIO_000300: 5.85e1

QD
type: SiteQuality
SIO_000300: 3.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.343e0

GenotypeQuality
all individuals: 2894
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 203
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 337
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3172
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 273
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 392
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 323
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2134
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 404
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 32464
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6933
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 909
bin: 8.75e1
variant carriers: 7

South Asian
type: Population
allele count: 3
allele frequency: 1.817961459217065e-4
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.546099290780142e-3
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.350163627863488e-4
allele num: 8556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 67
allele frequency: 1.079252577319588e-2
allele num: 6208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 260
allele frequency: 4.063388866314506e-3
allele num: 63986
num of homozygotes: 0

African
type: Population
allele count: 75
allele frequency: 7.794637289544793e-3
allele num: 9622
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.482500435312555e-4
allele num: 11486
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.343e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.04e-1

DP
type: SiteQuality
SIO_000300: 1.735732e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 3.7e0

VQSLOD
type: SiteQuality
SIO_000300: -1.472e2

FS
type: SiteQuality
SIO_000300: 1.7871e2

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

MQ
type: SiteQuality
SIO_000300: 5.85e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.29e-1

GenotypeQuality
all individuals: 292
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33384
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6524
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527650473571647e-5
allele num: 65460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.52e0

MQRankSum
type: SiteQuality
SIO_000300: -6.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
SIO_000300: 2.5179e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

DP
type: SiteQuality
SIO_000300: 1.737113e6

VQSLOD
type: SiteQuality
SIO_000300: -4.101e0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33384
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3317
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.525320317266626e-4
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.737113e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

QD
type: SiteQuality
SIO_000300: 6.52e0

FS
type: SiteQuality
SIO_000300: 2.5179e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: -4.101e0

MQRankSum
type: SiteQuality
SIO_000300: -6.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e0

GenotypeQuality
all individuals: 419
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33245
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.108175793299331e-5
allele num: 65486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.736985e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.147e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.009e0

QD
type: SiteQuality
SIO_000300: 1.689e1

GenotypeQuality
all individuals: 395
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2996
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3301
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6526
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.114338122898196e-5
allele num: 65420
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

DP
type: SiteQuality
SIO_000300: 1.736701e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

FS
type: SiteQuality
SIO_000300: 9.564e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.549e0

QD
type: SiteQuality
SIO_000300: 2.535e1

MQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
all individuals: 7233
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65374
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.970443349753695e-4
allele num: 10150
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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VQSLOD
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FS
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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SIO_000300: -2.67e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65588
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

MQ
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SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 2.3762e1

ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528771479239283e-5
allele num: 65412
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8594
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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DP
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FS
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.52151421094273e-5
allele num: 65724
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.635e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
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DP
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65758
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQRankSum
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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African
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allele frequency: 9.742790335151988e-5
allele num: 10264
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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ClippingRankSum
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MQRankSum
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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MQ
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.516760200212346e-5
allele num: 65930
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FS
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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Latino
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ClippingRankSum
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FS
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BaseQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16508
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European (Non-Finnish)
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European (Finnish)
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African
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Other
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East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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SIO_000300: 3.0e-4

DP
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SIO_000300: 1.757778e6

QD
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SIO_000300: 1.334e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.95e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.516346212167162e-5
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African
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MQRankSum
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ClippingRankSum
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MQ
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DP
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QD
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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QD
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 6.065568798714099e-5
allele num: 65946
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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VQSLOD
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FS
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QD
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.516990291262136e-5
allele num: 65920
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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num of homozygotes: 0

MQ
type: SiteQuality
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QD
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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Latino
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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African
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Latino
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MQ
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BaseQRankSum
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DP
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FS
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VQSLOD
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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African
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Latino
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South Asian
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MQ
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MQRankSum
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SIO_000300: -8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 7.555e0

QD
type: SiteQuality
SIO_000300: 1.534e1

VQSLOD
type: SiteQuality
SIO_000300: -2.55e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.755187e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

GenotypeQuality
all individuals: 7375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 959
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51758885482745e-5
allele num: 65894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.266e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.065e0

FS
type: SiteQuality
SIO_000300: 7.509e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.755251e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7308
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.72951936174353e-5
allele num: 10278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.74968e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

QD
type: SiteQuality
SIO_000300: 1.481e1

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2264
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.946282600233554e-4
allele num: 10276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 4.057e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 1.748077e6

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeQuality
all individuals: 33704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 104

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 104
allele frequency: 9.001211701575211e-3
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.9e-1

QD
type: SiteQuality
SIO_000300: 1.219e1

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.244e0

DP
type: SiteQuality
SIO_000300: 1.751204e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2999
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65818
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.065e-1

MQ
type: SiteQuality
SIO_000300: 5.885e1

QD
type: SiteQuality
SIO_000300: 1.263e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.747269e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6674
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 945
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.75e0

DP
type: SiteQuality
SIO_000300: 1.745875e6

VQSLOD
type: SiteQuality
SIO_000300: -1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.79e-1

MQ
type: SiteQuality
SIO_000300: 5.85e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.518e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.798e0

MQRankSum
type: SiteQuality
SIO_000300: -8.37e-1

FS
type: SiteQuality
SIO_000300: 2.166e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.353e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.95e-1

DP
type: SiteQuality
SIO_000300: 1.745513e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520265134239411e-5
allele num: 65778
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.601e-1

FS
type: SiteQuality
SIO_000300: 2.452e0

MQ
type: SiteQuality
SIO_000300: 5.7e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

DP
type: SiteQuality
SIO_000300: 1.743458e6

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 2.75e1
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GenotypeQuality
all individuals: 226
bin: 4.75e1
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GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3330
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GenotypeQuality
all individuals: 929
bin: 2.25e1
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GenotypeQuality
all individuals: 171
bin: 5.25e1
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GenotypeQuality
all individuals: 6875
bin: 9.75e1
variant carriers: 207

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.947798987144527e-4
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.04228780042592e-5
allele num: 65740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 203
allele frequency: 1.756967284057469e-2
allele num: 11554
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

FS
type: SiteQuality
SIO_000300: 1.372e0

VQSLOD
type: SiteQuality
SIO_000300: 4.15e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 1.749614e6

QD
type: SiteQuality
SIO_000300: 1.328e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65740
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

DP
type: SiteQuality
SIO_000300: 1.749614e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 1.372e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

MQRankSum
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SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

QD
type: SiteQuality
SIO_000300: 1.328e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.735202492211838e-5
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.042565491222199e-5
allele num: 65734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.588e0

QD
type: SiteQuality
SIO_000300: 9.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.393e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 5.479e0

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

DP
type: SiteQuality
SIO_000300: 1.746013e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.735202492211838e-5
allele num: 10272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.007e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.39e-1

FS
type: SiteQuality
SIO_000300: 1.102e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
SIO_000300: 1.7453e6

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.673411020172209e-4
allele num: 65734
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.314e1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.714e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 1.744418e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.948937828883259e-4
allele num: 10262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.548e0

VQSLOD
type: SiteQuality
SIO_000300: 4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 2.944e0

DP
type: SiteQuality
SIO_000300: 1.744402e6

QD
type: SiteQuality
SIO_000300: 9.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.264542235710673e-4
allele num: 7908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 392
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

VQSLOD
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DP
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BaseQRankSum
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SIO_000300: -1.537e0

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

InbreedingCoeff
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SIO_000300: -7.86e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 2.456e0

MQRankSum
type: SiteQuality
SIO_000300: 8.91e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.633986928104575e-3
allele num: 612
num of homozygotes: 0

South Asian
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num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.12e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.325e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.739e0

DP
type: SiteQuality
SIO_000300: 5.96024e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.513e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.259763164525069e-4
allele num: 7938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

FS
type: SiteQuality
SIO_000300: 5.679999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 6.06848e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-2

QD
type: SiteQuality
SIO_000300: 8.390000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.711e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.21e-2

DP
type: SiteQuality
SIO_000300: 5.7492e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.874e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.683501683501683e-3
allele num: 594
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.27e-2

QD
type: SiteQuality
SIO_000300: 7.77e0

VQSLOD
type: SiteQuality
SIO_000300: 3.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.569e1

FS
type: SiteQuality
SIO_000300: 2.808e0

DP
type: SiteQuality
SIO_000300: 5.73804e5

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.182033096926714e-4
allele num: 8460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7916
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

FS
type: SiteQuality
SIO_000300: 1.805e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

DP
type: SiteQuality
SIO_000300: 5.73958e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.18e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.385e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.506e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 590
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.191895113230036e-4
allele num: 8390
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 9.596e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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South Asian
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allele num: 7906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 3.424657534246575e-3
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.036e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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SIO_000300: 7.27e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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East Asian
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.626e0

BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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VQSLOD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

African
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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BaseQRankSum
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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DP
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 501
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3835
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.41e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.62358e5

FS
type: SiteQuality
SIO_000300: 2.027e0

VQSLOD
type: SiteQuality
SIO_000300: -3.204e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.268e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4050
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 201
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5036
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.209774981853375e-4
allele num: 8266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.47e-2

DP
type: SiteQuality
SIO_000300: 5.62655e5

FS
type: SiteQuality
SIO_000300: 2.229e0

VQSLOD
type: SiteQuality
SIO_000300: -2.196e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.18e1