13-113505487-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505487
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505487
    reference: chr 13
allele count: 21
allele frequency: 1.730417442607822e-4
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1946T>C
  hgvsp: ENSP00000420387.1:p.Ile649Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1946T>C
  hgvsp: ENSP00000364796.3:p.Ile649Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1897T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1946T>C
  hgvsp: ENSP00000283558.8:p.Ile649Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.208T>C
  hgvsp: ENSP00000420696.1:p.Ile70Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1946T>C
  hgvsp: ENSP00000364781.2:p.Ile649Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3106T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1870T>C
  hgvsp: ENSP00000396374.1:p.Ile624Thr
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16100
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4998
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile649Thr
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

13-113505488-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505488
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505488
    reference: chr 13
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1947A>G
  hgvsp: ENSP00000420387.1:p.Ile649Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.209A>G
  hgvsp: ENSP00000420696.1:p.Ile70Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1947A>G
  hgvsp: ENSP00000364781.2:p.Ile649Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1947A>G
  hgvsp: ENSP00000364796.3:p.Ile649Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1871A>G
  hgvsp: ENSP00000396374.1:p.Ile624Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1947A>G
  hgvsp: ENSP00000283558.8:p.Ile649Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3105A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1898A>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4998
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25475
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile649Met
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

13-113505510-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505510
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505510
    reference: chr 13
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1969G>A
  hgvsp: ENSP00000364781.2:p.Gly657Ser
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.231G>A
  hgvsp: ENSP00000420696.1:p.Gly78Ser
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1969G>A
  hgvsp: ENSP00000420387.1:p.Gly657Ser
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1920G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1893G>A
  hgvsp: ENSP00000396374.1:p.Gly632Ser
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1969G>A
  hgvsp: ENSP00000283558.8:p.Gly657Ser
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1969G>A
  hgvsp: ENSP00000364796.3:p.Gly657Ser
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3083G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.17G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4005
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly657Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

13-113505513-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505513
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505513
    reference: chr 13
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3080G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1972G>A
  hgvsp: ENSP00000420387.1:p.Ala658Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1972G>A
  hgvsp: ENSP00000364781.2:p.Ala658Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.20G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1923G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1896G>A
  hgvsp: ENSP00000396374.1:p.Ala633Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1972G>A
  hgvsp: ENSP00000283558.8:p.Ala658Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.234G>A
  hgvsp: ENSP00000420696.1:p.Ala79Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1972G>A
  hgvsp: ENSP00000364796.3:p.Ala658Thr
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 17626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3534
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4992
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala658Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

13-113505530-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505530
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505530
    reference: chr 13
allele count: 2
allele frequency: 1.657357840131263e-5
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1940C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1913C>T
  hgvsp: ENST00000418678.1:c.1913C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1989C>T
  hgvsp: ENST00000375645.3:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1989C>T
  hgvsp: ENST00000283558.8:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.37C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3063C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.251C>T
  hgvsp: ENST00000471555.1:c.251C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1989C>T
  hgvsp: ENST00000487903.1:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1989C>T
  hgvsp: ENST00000375630.2:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1989C>T
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

13-113505532-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505532
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505532
    reference: chr 13
allele count: 1
allele frequency: 8.292148993333113e-6
allele num: 120596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991G>A
  hgvsp: ENSP00000364796.3:p.Arg664Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991G>A
  hgvsp: ENSP00000283558.8:p.Arg664Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991G>A
  hgvsp: ENSP00000364781.2:p.Arg664Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991G>A
  hgvsp: ENSP00000420387.1:p.Arg664Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253G>A
  hgvsp: ENSP00000420696.1:p.Arg85Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915G>A
  hgvsp: ENSP00000396374.1:p.Arg639Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3061G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg664Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

13-113505543-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505543
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505543
    reference: chr 13
allele count: 4
allele frequency: 3.331612000466426e-5
allele num: 120062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+11C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+11C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3050C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+11C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+11C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+11C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+11C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+11C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+11C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum

13-113505547-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505547
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505547
    reference: chr 13
allele count: 2
allele frequency: 1.667834150572067e-5
allele num: 119916
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+15T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+15T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+15T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+15T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3046T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+15T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+15T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+15T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+15T>C
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3954
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

13-113505550-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505550
    reference: chr 13
allele count: 2
allele frequency: 1.670508836991748e-5
allele num: 119724
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+18A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+18A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+18A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+18A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+18A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3043A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+18A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+18A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+18A>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21565
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8612
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/13-113505554-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505554
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505554
    reference: chr 13
allele count: 2
allele frequency: 1.67521023888498e-5
allele num: 119388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+22C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+22C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+22C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+22C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3039C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+22C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+22C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+22C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+22C>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15442
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8867
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2525
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8466
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4831
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

13-113505554-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505554
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505554
    reference: chr 13
allele count: 1
allele frequency: 8.3760511944249e-6
allele num: 119388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3039C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+22C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+22C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+22C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+22C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+22C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+22C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+22C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+22C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

13-113505555-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505555
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505555
    reference: chr 13
allele count: 1
allele frequency: 8.376472164982996e-6
allele num: 119382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3038G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+23G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8461
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

13-113505559-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505559
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505559
    reference: chr 13
allele count: 1
allele frequency: 8.385181706887589e-6
allele num: 119258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3034T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+27T>C
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4977
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4772
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3882
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/13-113505561-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505561
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505561
    reference: chr 13
allele count: 1
allele frequency: 8.387291575804341e-6
allele num: 119228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+29A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+29A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+29A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+29A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+29A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+29A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+29A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3032A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+29A>C
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4737
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19967
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3859
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

13-113505564-GAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505564
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505562
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 119018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+34_1991+35delCA
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+34_1991+35delCA
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3027_114-3026delCA
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+34_253+35delCA
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+34_1991+35delCA
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+34_1915+35delCA
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+34_1991+35delCA
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+34_1942+35delCA
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+34_39+35delCA
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3835
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: GAC
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

13-113505566-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505566
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505566
    reference: chr 13
allele count: 8
allele frequency: 6.728909075616116e-5
allele num: 118890
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+34C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+34C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+34C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3027C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+34C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+34C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+34C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+34C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+34C>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14547
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8058
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15034
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3086
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4641
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8017
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3839
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

13-113505571-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505571
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505571
    reference: chr 13
allele count: 1
allele frequency: 8.427581789681268e-6
allele num: 118658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3022T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+39T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+39T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+39T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+39T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+39T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+39T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+39T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+39T>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD

13-113505584-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113505584
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113505584
    reference: chr 13
allele count: 1
allele frequency: 8.5647236163689e-6
allele num: 116758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.253+52G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1915+52G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1991+52G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-3009G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1991+52G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1991+52G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1991+52G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1942+52G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459011
  gene symbol: ATP11A
  hgvsc: ENST00000459011.2:n.39+52G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6071
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3876
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS

13-113508542-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508542
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508542
    reference: chr 13
allele count: 1
allele frequency: 8.466683600033867e-6
allele num: 118110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-51T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-51T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-51T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-51T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-51T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-51T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-51T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-51T>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3618
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2329
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

13-113508558-TTTCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508558
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508553
    reference: chr 13
allele count: 1
allele frequency: 8.435828651448432e-6
allele num: 118542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-33_1943-29delTCTCT
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-33_114-29delTCTCT
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-33_1992-29delTCTCT
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-33_1992-29delTCTCT
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-33_1992-29delTCTCT
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-33_254-29delTCTCT
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-33_1916-29delTCTCT
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-33_1992-29delTCTCT
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: TTTCTC
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

13-113508561-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508561
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508561
    reference: chr 13
allele count: 1
allele frequency: 8.436397995511836e-6
allele num: 118534
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-32C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-32C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-32C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-32C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-32C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-32C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-32C>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-32C>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31892
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/13-113508561-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508561
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508561
    reference: chr 13
allele count: 1
allele frequency: 8.436397995511836e-6
allele num: 118534
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-32C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-32C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-32C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-32C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-32C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-32C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-32C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-32C>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2614
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

13-113508564-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508564
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508564
    reference: chr 13
allele count: 1
allele frequency: 8.421052631578947e-6
allele num: 118750
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-29T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-29T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-29T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-29T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-29T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-29T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-29T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-29T>C
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3850
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

13-113508565-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508565
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508565
    reference: chr 13
allele count: 205
allele frequency: 1.725008414675194e-3
allele num: 118840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-28A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-28A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-28A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-28A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-28A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-28A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-28A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-28A>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 7.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 6.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6047
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6938
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2635
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

13-113508566-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508566
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508566
    reference: chr 13
allele count: 3
allele frequency: 2.523043800040369e-5
allele num: 118904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-27T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-27T>C
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

13-113508566-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508566
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508566
    reference: chr 13
allele count: 1
allele frequency: 8.410146000134562e-6
allele num: 118904
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-27T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-27T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-27T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-27T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-27T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-27T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-27T>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-27T>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3898
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

13-113508570-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508570
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508570
    reference: chr 13
allele count: 1
allele frequency: 8.388276544701125e-6
allele num: 119214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-23G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-23G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5803
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31805
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3981
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

13-113508571-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508571
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508571
    reference: chr 13
allele count: 1
allele frequency: 8.385603595746822e-6
allele num: 119252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-22T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-22T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-22T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-22T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-22T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-22T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-22T>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-22T>C
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11097
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD

13-113508583-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508583
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508583
    reference: chr 13
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1992-10C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1943-10C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1992-10C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.114-10C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.254-10C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1992-10C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1992-10C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1916-10C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6048
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31807
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

13-113508600-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508600
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508600
    reference: chr 13
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1923G>C
  hgvsp: ENSP00000396374.1:p.Glu642Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.1999G>C
  hgvsp: ENSP00000283558.8:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.1999G>C
  hgvsp: ENSP00000364796.3:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1950G>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.1999G>C
  hgvsp: ENSP00000364781.2:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.261G>C
  hgvsp: ENSP00000420696.1:p.Glu88Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.121G>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.1999G>C
  hgvsp: ENSP00000420387.1:p.Glu667Gln
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu667Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

13-113508605-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508605
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508605
    reference: chr 13
allele count: 18
allele frequency: 1.490757304710793e-4
allele num: 120744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2004A>G
  hgvsp: ENST00000375630.2:c.2004A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.266A>G
  hgvsp: ENST00000471555.1:c.266A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1955A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.126A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2004A>G
  hgvsp: ENST00000283558.8:c.2004A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2004A>G
  hgvsp: ENST00000375645.3:c.2004A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1928A>G
  hgvsp: ENST00000418678.1:c.1928A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2004A>G
  hgvsp: ENST00000487903.1:c.2004A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys668Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

13-113508611-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508611
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508611
    reference: chr 13
allele count: 663
allele frequency: 5.486230636833046e-3
allele num: 120848
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2010A>G
  hgvsp: ENST00000283558.8:c.2010A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.132A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2010A>G
  hgvsp: ENST00000487903.1:c.2010A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.272A>G
  hgvsp: ENST00000471555.1:c.272A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2010A>G
  hgvsp: ENST00000375630.2:c.2010A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1961A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1934A>G
  hgvsp: ENST00000418678.1:c.1934A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2010A>G
  hgvsp: ENST00000375645.3:c.2010A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 8.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 5.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 4.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 6668
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6503
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 6.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 6.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 7945
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 5.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 8.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 7.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 7.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 3.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 4.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32019
  bin: 9.75e1
  variant carriers: 647
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala670Ala
num of homozygotes: 15
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

13-113508617-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508617
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508617
    reference: chr 13
allele count: 1
allele frequency: 8.270888127967181e-6
allele num: 120906
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2016C>T
  hgvsp: ENST00000375630.2:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.278C>T
  hgvsp: ENST00000471555.1:c.278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2016C>T
  hgvsp: ENST00000487903.1:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1967C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.138C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1940C>T
  hgvsp: ENST00000418678.1:c.1940C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2016C>T
  hgvsp: ENST00000283558.8:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2016C>T
  hgvsp: ENST00000375645.3:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12571
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr672Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/13-113508620-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508620
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508620
    reference: chr 13
allele count: 2
allele frequency: 1.653657891255457e-5
allele num: 120944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2019C>A
  hgvsp: ENST00000283558.8:c.2019C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1943C>A
  hgvsp: ENST00000418678.1:c.1943C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2019C>A
  hgvsp: ENST00000375630.2:c.2019C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2019C>A
  hgvsp: ENST00000487903.1:c.2019C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1970C>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.281C>A
  hgvsp: ENST00000471555.1:c.281C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2019C>A
  hgvsp: ENST00000375645.3:c.2019C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.141C>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile673Ile
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

13-113508620-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508620
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508620
    reference: chr 13
allele count: 3
allele frequency: 2.480486836883186e-5
allele num: 120944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1943C>T
  hgvsp: ENST00000418678.1:c.1943C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1970C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2019C>T
  hgvsp: ENST00000283558.8:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2019C>T
  hgvsp: ENST00000375645.3:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.141C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2019C>T
  hgvsp: ENST00000375630.2:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.281C>T
  hgvsp: ENST00000471555.1:c.281C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2019C>T
  hgvsp: ENST00000487903.1:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31708
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile673Ile
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

13-113508621-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508621
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508621
    reference: chr 13
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.142G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2020G>A
  hgvsp: ENSP00000283558.8:p.Glu674Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1971G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1944G>A
  hgvsp: ENSP00000396374.1:p.Glu649Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.282G>A
  hgvsp: ENSP00000420696.1:p.Glu95Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2020G>A
  hgvsp: ENSP00000364781.2:p.Glu674Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2020G>A
  hgvsp: ENSP00000420387.1:p.Glu674Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2020G>A
  hgvsp: ENSP00000364796.3:p.Glu674Lys
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31707
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu674Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

13-113508624-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508624
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508624
    reference: chr 13
allele count: 8
allele frequency: 6.610259122157589e-5
allele num: 121024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.285G>C
  hgvsp: ENSP00000420696.1:p.Ala96Pro
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1974G>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2023G>C
  hgvsp: ENSP00000420387.1:p.Ala675Pro
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.145G>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2023G>C
  hgvsp: ENSP00000364796.3:p.Ala675Pro
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1947G>C
  hgvsp: ENSP00000396374.1:p.Ala650Pro
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2023G>C
  hgvsp: ENSP00000364781.2:p.Ala675Pro
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2023G>C
  hgvsp: ENSP00000283558.8:p.Ala675Pro
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6056
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31706
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala675Pro
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

13-113508637-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508637
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508637
    reference: chr 13
allele count: 2
allele frequency: 1.651636772041093e-5
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2036C>T
  hgvsp: ENSP00000364781.2:p.Ala679Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2036C>T
  hgvsp: ENSP00000420387.1:p.Ala679Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2036C>T
  hgvsp: ENSP00000283558.8:p.Ala679Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.298C>T
  hgvsp: ENSP00000420696.1:p.Ala100Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1960C>T
  hgvsp: ENSP00000396374.1:p.Ala654Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2036C>T
  hgvsp: ENSP00000364796.3:p.Ala679Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.158C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1987C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4265
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31702
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ala679Val
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

13-113508638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508638
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508638
    reference: chr 13
allele count: 2
allele frequency: 1.651773178507128e-5
allele num: 121082
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2037C>T
  hgvsp: ENST00000487903.1:c.2037C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2037C>T
  hgvsp: ENST00000375645.3:c.2037C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1988C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2037C>T
  hgvsp: ENST00000283558.8:c.2037C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2037C>T
  hgvsp: ENST00000375630.2:c.2037C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.159C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.299C>T
  hgvsp: ENST00000471555.1:c.299C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1961C>T
  hgvsp: ENST00000418678.1:c.1961C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala679Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

13-113508640-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508640
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508640
    reference: chr 13
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2039G>C
  hgvsp: ENSP00000283558.8:p.Gly680Ala
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2039G>C
  hgvsp: ENSP00000364796.3:p.Gly680Ala
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2039G>C
  hgvsp: ENSP00000420387.1:p.Gly680Ala
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.161G>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1990G>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.301G>C
  hgvsp: ENSP00000420696.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1963G>C
  hgvsp: ENSP00000396374.1:p.Gly655Ala
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2039G>C
  hgvsp: ENSP00000364781.2:p.Gly680Ala
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8096
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly680Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

13-113508641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508641
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508641
    reference: chr 13
allele count: 216
allele frequency: 1.783473148820926e-3
allele num: 121112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.302G>A
  hgvsp: ENST00000471555.1:c.302G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1964G>A
  hgvsp: ENST00000418678.1:c.1964G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2040G>A
  hgvsp: ENST00000375645.3:c.2040G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.1991G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2040G>A
  hgvsp: ENST00000283558.8:c.2040G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.162G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2040G>A
  hgvsp: ENST00000487903.1:c.2040G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2040G>A
  hgvsp: ENST00000375630.2:c.2040G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 5.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6736
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly680Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ

13-113508654-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508654
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508654
    reference: chr 13
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2053G>A
  hgvsp: ENSP00000364781.2:p.Val685Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.315G>A
  hgvsp: ENSP00000420696.1:p.Val106Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2053G>A
  hgvsp: ENSP00000364796.3:p.Val685Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2053G>A
  hgvsp: ENSP00000283558.8:p.Val685Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1977G>A
  hgvsp: ENSP00000396374.1:p.Val660Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.175G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2004G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2053G>A
  hgvsp: ENSP00000420387.1:p.Val685Ile
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31615
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12818
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val685Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

13-113508662-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508662
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508662
    reference: chr 13
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1985G>A
  hgvsp: ENST00000418678.1:c.1985G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.323G>A
  hgvsp: ENST00000471555.1:c.323G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2061G>A
  hgvsp: ENST00000375630.2:c.2061G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2061G>A
  hgvsp: ENST00000283558.8:c.2061G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2061G>A
  hgvsp: ENST00000487903.1:c.2061G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2061G>A
  hgvsp: ENST00000375645.3:c.2061G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2012G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.183G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31607
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr687Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

13-113508668-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508668
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508668
    reference: chr 13
allele count: 6
allele frequency: 4.955483242207502e-5
allele num: 121078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2067C>T
  hgvsp: ENST00000375630.2:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2067C>T
  hgvsp: ENST00000283558.8:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2067C>T
  hgvsp: ENST00000487903.1:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.1991C>T
  hgvsp: ENST00000418678.1:c.1991C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.329C>T
  hgvsp: ENST00000471555.1:c.329C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.189C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2067C>T
  hgvsp: ENST00000375645.3:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2018C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6047
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6668
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp689Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

13-113508679-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508679
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508679
    reference: chr 13
allele count: 22
allele frequency: 1.818512456810329e-4
allele num: 120978
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2078C>T
  hgvsp: ENSP00000283558.8:p.Thr693Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.340C>T
  hgvsp: ENSP00000420696.1:p.Thr114Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.200C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2078C>T
  hgvsp: ENSP00000364796.3:p.Thr693Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2078C>T
  hgvsp: ENSP00000364781.2:p.Thr693Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2002C>T
  hgvsp: ENSP00000396374.1:p.Thr668Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2078C>T
  hgvsp: ENSP00000420387.1:p.Thr693Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2029C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1719
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12373
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr693Met
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

13-113508680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508680
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508680
    reference: chr 13
allele count: 4
allele frequency: 3.306550276096948e-5
allele num: 120972
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2079G>A
  hgvsp: ENST00000375645.3:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2079G>A
  hgvsp: ENST00000375630.2:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2079G>A
  hgvsp: ENST00000283558.8:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2030G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.341G>A
  hgvsp: ENST00000471555.1:c.341G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2003G>A
  hgvsp: ENST00000418678.1:c.2003G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.201G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2079G>A
  hgvsp: ENST00000487903.1:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6587
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr693Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

13-113508682-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508682
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508682
    reference: chr 13
allele count: 1
allele frequency: 8.268426187759421e-6
allele num: 120942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.343C>T
  hgvsp: ENSP00000420696.1:p.Ala115Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2081C>T
  hgvsp: ENSP00000283558.8:p.Ala694Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2081C>T
  hgvsp: ENSP00000364796.3:p.Ala694Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2005C>T
  hgvsp: ENSP00000396374.1:p.Ala669Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2081C>T
  hgvsp: ENSP00000420387.1:p.Ala694Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2081C>T
  hgvsp: ENSP00000364781.2:p.Ala694Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.203C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2032C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala694Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

13-113508683-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508683
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508683
    reference: chr 13
allele count: 21
allele frequency: 1.736082406044874e-4
allele num: 120962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2082C>T
  hgvsp: ENST00000375645.3:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.204C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.344C>T
  hgvsp: ENST00000471555.1:c.344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2006C>T
  hgvsp: ENST00000418678.1:c.2006C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2082C>T
  hgvsp: ENST00000487903.1:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2082C>T
  hgvsp: ENST00000375630.2:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2033C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2082C>T
  hgvsp: ENST00000283558.8:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala694Ala
num of homozygotes: 1
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

13-113508684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508684
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508684
    reference: chr 13
allele count: 6
allele frequency: 4.960973673766371e-5
allele num: 120944
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2083G>A
  hgvsp: ENSP00000420387.1:p.Ala695Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2007G>A
  hgvsp: ENSP00000396374.1:p.Ala670Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.345G>A
  hgvsp: ENSP00000420696.1:p.Ala116Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2034G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2083G>A
  hgvsp: ENSP00000283558.8:p.Ala695Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2083G>A
  hgvsp: ENSP00000364796.3:p.Ala695Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.205G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2083G>A
  hgvsp: ENSP00000364781.2:p.Ala695Thr
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6579
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31610
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala695Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP

13-113508685-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508685
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508685
    reference: chr 13
allele count: 6
allele frequency: 4.96089163759033e-5
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2008C>T
  hgvsp: ENSP00000396374.1:p.Ala670Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2035C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2084C>T
  hgvsp: ENSP00000420387.1:p.Ala695Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.346C>T
  hgvsp: ENSP00000420696.1:p.Ala116Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2084C>T
  hgvsp: ENSP00000364796.3:p.Ala695Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2084C>T
  hgvsp: ENSP00000283558.8:p.Ala695Val
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.206C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2084C>T
  hgvsp: ENSP00000364781.2:p.Ala695Val
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7943
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4177
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala695Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

13-113508686-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508686
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508686
    reference: chr 13
allele count: 3
allele frequency: 2.480281760007937e-5
allele num: 120954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2085G>A
  hgvsp: ENST00000375630.2:c.2085G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2009G>A
  hgvsp: ENST00000418678.1:c.2009G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2085G>A
  hgvsp: ENST00000375645.3:c.2085G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2085G>A
  hgvsp: ENST00000283558.8:c.2085G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.207G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.347G>A
  hgvsp: ENST00000471555.1:c.347G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2036G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2085G>A
  hgvsp: ENST00000487903.1:c.2085G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4183
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala695Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

13-113508692-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508692
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508692
    reference: chr 13
allele count: 2
allele frequency: 1.654122901331569e-5
allele num: 120910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2091G>A
  hgvsp: ENST00000375645.3:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2091G>A
  hgvsp: ENST00000375630.2:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.213G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2091G>A
  hgvsp: ENST00000283558.8:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.353G>A
  hgvsp: ENST00000471555.1:c.353G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2091G>A
  hgvsp: ENST00000487903.1:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2015G>A
  hgvsp: ENST00000418678.1:c.2015G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2042G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12573
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2745
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr697Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

13-113508699-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508699
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508699
    reference: chr 13
allele count: 6
allele frequency: 4.963928784168377e-5
allele num: 120872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2049G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.360G>A
  hgvsp: ENSP00000420696.1:p.Ala121Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2022G>A
  hgvsp: ENSP00000396374.1:p.Ala675Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2098G>A
  hgvsp: ENSP00000364796.3:p.Ala700Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2098G>A
  hgvsp: ENSP00000283558.8:p.Ala700Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2098G>A
  hgvsp: ENSP00000420387.1:p.Ala700Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2098G>A
  hgvsp: ENSP00000364781.2:p.Ala700Thr
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.220G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6521
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2744
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala700Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/13-113508705-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508705
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508705
    reference: chr 13
allele count: 1
allele frequency: 8.274857672448034e-6
allele num: 120848
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2055A>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2104A>C
  hgvsp: ENSP00000364796.3:p.Lys702Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2104A>C
  hgvsp: ENSP00000283558.8:p.Lys702Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2104A>C
  hgvsp: ENSP00000420387.1:p.Lys702Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2104A>C
  hgvsp: ENSP00000364781.2:p.Lys702Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.366A>C
  hgvsp: ENSP00000420696.1:p.Lys123Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2028A>C
  hgvsp: ENSP00000396374.1:p.Lys677Gln
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.226A>C
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5882
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31612
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2427
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys702Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

13-113508714-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508714
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508714
    reference: chr 13
allele count: 53
allele frequency: 4.389379358322429e-4
allele num: 120746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2113C>T
  hgvsp: ENSP00000364781.2:p.Arg705Cys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.375C>T
  hgvsp: ENSP00000420696.1:p.Arg126Cys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.235C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2113C>T
  hgvsp: ENSP00000283558.8:p.Arg705Cys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2037C>T
  hgvsp: ENSP00000396374.1:p.Arg680Cys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2113C>T
  hgvsp: ENSP00000420387.1:p.Arg705Cys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2113C>T
  hgvsp: ENSP00000364796.3:p.Arg705Cys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2064C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31638
  bin: 9.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4088
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg705Cys
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

13-113508722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508722
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508722
    reference: chr 13
allele count: 168
allele frequency: 1.391488727284775e-3
allele num: 120734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2121C>T
  hgvsp: ENST00000375630.2:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2121C>T
  hgvsp: ENST00000487903.1:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2045C>T
  hgvsp: ENST00000418678.1:c.2045C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2072C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2121C>T
  hgvsp: ENST00000375645.3:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2121C>T
  hgvsp: ENST00000283558.8:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.383C>T
  hgvsp: ENST00000471555.1:c.383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.243C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5512
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7781
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6483
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 6.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn707Asn
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD

13-113508724-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508724
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508724
    reference: chr 13
allele count: 2
allele frequency: 1.656643970644269e-5
allele num: 120726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2123C>T
  hgvsp: ENSP00000364781.2:p.Thr708Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2123C>T
  hgvsp: ENSP00000364796.3:p.Thr708Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2123C>T
  hgvsp: ENSP00000420387.1:p.Thr708Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2074C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2047C>T
  hgvsp: ENSP00000396374.1:p.Thr683Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2123C>T
  hgvsp: ENSP00000283558.8:p.Thr708Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.385C>T
  hgvsp: ENSP00000420696.1:p.Thr129Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.245C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr708Met
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

13-113508725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508725
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508725
    reference: chr 13
allele count: 156
allele frequency: 1.292417815482503e-3
allele num: 120704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.386G>A
  hgvsp: ENST00000471555.1:c.386G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2048G>A
  hgvsp: ENST00000418678.1:c.2048G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.246G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2124G>A
  hgvsp: ENST00000375630.2:c.2124G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2124G>A
  hgvsp: ENST00000375645.3:c.2124G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2124G>A
  hgvsp: ENST00000487903.1:c.2124G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2124G>A
  hgvsp: ENST00000283558.8:c.2124G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2075G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6036
  bin: 4.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 7.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 4104
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr708Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

13-113508727-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508727
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508727
    reference: chr 13
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2126A>G
  hgvsp: ENSP00000283558.8:p.Gln709Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2126A>G
  hgvsp: ENSP00000420387.1:p.Gln709Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2077A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.388A>G
  hgvsp: ENSP00000420696.1:p.Gln130Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.248A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2050A>G
  hgvsp: ENSP00000396374.1:p.Gln684Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2126A>G
  hgvsp: ENSP00000364796.3:p.Gln709Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2126A>G
  hgvsp: ENSP00000364781.2:p.Gln709Arg
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5571
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4098
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln709Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

13-113508743-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508743
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508743
    reference: chr 13
allele count: 2
allele frequency: 1.659255326209597e-5
allele num: 120536
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2142C>T
  hgvsp: ENST00000487903.1:c.2142C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2142C>T
  hgvsp: ENST00000375645.3:c.2142C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.404C>T
  hgvsp: ENST00000471555.1:c.404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2142C>T
  hgvsp: ENST00000283558.8:c.2142C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2093C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2142C>T
  hgvsp: ENST00000375630.2:c.2142C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.264C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2066C>T
  hgvsp: ENST00000418678.1:c.2066C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5571
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6040
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12462
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr714Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

13-113508748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508748
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508748
    reference: chr 13
allele count: 1
allele frequency: 8.298755186721992e-6
allele num: 120500
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2147A>G
  hgvsp: ENSP00000420387.1:p.Lys716Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2147A>G
  hgvsp: ENSP00000364796.3:p.Lys716Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.409A>G
  hgvsp: ENSP00000420696.1:p.Lys137Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2071A>G
  hgvsp: ENSP00000396374.1:p.Lys691Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2098A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2147A>G
  hgvsp: ENSP00000283558.8:p.Lys716Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2147A>G
  hgvsp: ENSP00000364781.2:p.Lys716Arg
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.269A>G
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31649
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4075
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys716Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-113508755-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508755
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508755
    reference: chr 13
allele count: 147
allele frequency: 1.220768004251927e-3
allele num: 120416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.276C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2078C>T
  hgvsp: ENST00000418678.1:c.2078C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2154C>T
  hgvsp: ENST00000487903.1:c.2154C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2154C>T
  hgvsp: ENST00000283558.8:c.2154C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2154C>T
  hgvsp: ENST00000375645.3:c.2154C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.416C>T
  hgvsp: ENST00000471555.1:c.416C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2154C>T
  hgvsp: ENST00000375630.2:c.2154C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2105C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6401
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 6034
  bin: 4.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile718Ile
num of homozygotes: 1
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

13-113508756-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508756
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508756
    reference: chr 13
allele count: 4
allele frequency: 3.322921512593873e-5
allele num: 120376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2155G>A
  hgvsp: ENSP00000364796.3:p.Glu719Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2155G>A
  hgvsp: ENSP00000420387.1:p.Glu719Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.277G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2106G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2079G>A
  hgvsp: ENSP00000396374.1:p.Glu694Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2155G>A
  hgvsp: ENSP00000283558.8:p.Glu719Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.417G>A
  hgvsp: ENSP00000420696.1:p.Glu140Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2155G>A
  hgvsp: ENSP00000364781.2:p.Glu719Lys
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu719Lys
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

13-113508777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508777
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508777
    reference: chr 13
allele count: 3
allele frequency: 2.500791917440523e-5
allele num: 119962
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2176G>A
  hgvsp: ENSP00000364796.3:p.Val726Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2176G>A
  hgvsp: ENSP00000364781.2:p.Val726Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2176G>A
  hgvsp: ENSP00000283558.8:p.Val726Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2100G>A
  hgvsp: ENSP00000396374.1:p.Val701Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2176G>A
  hgvsp: ENSP00000420387.1:p.Val726Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.438G>A
  hgvsp: ENSP00000420696.1:p.Val147Ile
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2127G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.298G>A
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2371
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val726Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

13-113508786-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508786
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508786
    reference: chr 13
allele count: 1
allele frequency: 8.350451759440186e-6
allele num: 119754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2136G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2185G>A
  hgvsp: ENSP00000283558.8:p.Glu729Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2109G>A
  hgvsp: ENSP00000396374.1:p.Glu704Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.307G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2185G>A
  hgvsp: ENSP00000364796.3:p.Glu729Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.447G>A
  hgvsp: ENSP00000420696.1:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2185G>A
  hgvsp: ENSP00000420387.1:p.Glu729Lys
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2185G>A
  hgvsp: ENSP00000364781.2:p.Glu729Lys
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3902
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31655
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu729Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

13-113508795-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508795
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508795
    reference: chr 13
allele count: 1
allele frequency: 8.368060785593547e-6
allele num: 119502
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.456A>G
  hgvsp: ENSP00000420696.1:p.Lys153Glu
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2194A>G
  hgvsp: ENSP00000420387.1:p.Lys732Glu
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.316A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2145A>G
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2194A>G
  hgvsp: ENSP00000364796.3:p.Lys732Glu
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2194A>G
  hgvsp: ENSP00000283558.8:p.Lys732Glu
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2194A>G
  hgvsp: ENSP00000364781.2:p.Lys732Glu
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2118A>G
  hgvsp: ENSP00000396374.1:p.Lys707Glu
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3911
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys732Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

13-113508799-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508799
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508799
    reference: chr 13
allele count: 2
allele frequency: 1.675940202453577e-5
allele num: 119336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2149C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2198C>T
  hgvsp: ENSP00000364796.3:p.Thr733Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2198C>T
  hgvsp: ENSP00000420387.1:p.Thr733Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2198C>T
  hgvsp: ENSP00000364781.2:p.Thr733Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2122C>T
  hgvsp: ENSP00000396374.1:p.Thr708Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.460C>T
  hgvsp: ENSP00000420696.1:p.Thr154Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2198C>T
  hgvsp: ENSP00000283558.8:p.Thr733Met
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.320C>T
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr733Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

13-113508800-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508800
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508800
    reference: chr 13
allele count: 1
allele frequency: 8.379701012267883e-6
allele num: 119336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.321G>C
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2199G>C
  hgvsp: ENST00000283558.8:c.2199G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.461G>C
  hgvsp: ENST00000471555.1:c.461G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2199G>C
  hgvsp: ENST00000487903.1:c.2199G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2199G>C
  hgvsp: ENST00000375630.2:c.2199G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2123G>C
  hgvsp: ENST00000418678.1:c.2123G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2199G>C
  hgvsp: ENST00000375645.3:c.2199G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2150G>C
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3881
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr733Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

13-113508808-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508808
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508808
    reference: chr 13
allele count: 2
allele frequency: 1.678556441460344e-5
allele num: 119150
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2207G>A
  hgvsp: ENSP00000420387.1:p.Arg736His
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2158G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.469G>A
  hgvsp: ENSP00000420696.1:p.Arg157His
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.329G>A
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2131G>A
  hgvsp: ENSP00000396374.1:p.Arg711His
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2207G>A
  hgvsp: ENSP00000364796.3:p.Arg736His
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2207G>A
  hgvsp: ENSP00000283558.8:p.Arg736His
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2207G>A
  hgvsp: ENSP00000364781.2:p.Arg736His
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg736His
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

13-113508812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508812
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508812
    reference: chr 13
allele count: 1
allele frequency: 8.38940250675347e-6
allele num: 119198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2211C>T
  hgvsp: ENST00000375630.2:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.473C>T
  hgvsp: ENST00000471555.1:c.473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2135C>T
  hgvsp: ENST00000418678.1:c.2135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2211C>T
  hgvsp: ENST00000487903.1:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2162C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.333C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2211C>T
  hgvsp: ENST00000375645.3:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2211C>T
  hgvsp: ENST00000283558.8:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3841
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His737His
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

13-113508815-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113508815
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 113508815
    reference: chr 13
allele count: 3
allele frequency: 2.518215089144814e-5
allele num: 119132
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420387
  ensembl transcript: ENST00000487903
  gene symbol: ATP11A
  hgvsc: ENST00000487903.1:c.2214C>T
  hgvsp: ENST00000487903.1:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000283558
  ensembl transcript: ENST00000283558
  gene symbol: ATP11A
  hgvsc: ENST00000283558.8:c.2214C>T
  hgvsp: ENST00000283558.8:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000459908
  gene symbol: ATP11A
  hgvsc: ENST00000459908.1:n.2165C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068650
  ensembl transcript: ENST00000489577
  gene symbol: ATP11A
  hgvsc: ENST00000489577.1:n.336C>T
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364796
  ensembl transcript: ENST00000375645
  gene symbol: ATP11A
  hgvsc: ENST00000375645.3:c.2214C>T
  hgvsp: ENST00000375645.3:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000420696
  ensembl transcript: ENST00000471555
  gene symbol: ATP11A
  hgvsc: ENST00000471555.1:c.476C>T
  hgvsp: ENST00000471555.1:c.476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000396374
  ensembl transcript: ENST00000418678
  gene symbol: ATP11A
  hgvsc: ENST00000418678.1:c.2138C>T
  hgvsp: ENST00000418678.1:c.2138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068650
  ensembl protein: ENSP00000364781
  ensembl transcript: ENST00000375630
  gene symbol: ATP11A
  hgvsc: ENST00000375630.2:c.2214C>T
  hgvsp: ENST00000375630.2:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13552
canonical: true
consequence: synonymous
filter: PASS
hgvs: p.Ser738Ser
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8987
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 8993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4012
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3546
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25458
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2758
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.212415130940834e-3
allele num: 16496
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.94e-2

DP
type: SiteQuality
SIO_000300: 2.019712e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 5.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8967
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8998
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4012
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3546
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.471e0

QD
type: SiteQuality
SIO_000300: 1.195e1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 1.721e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

DP
type: SiteQuality
SIO_000300: 2.018953e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4997
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8960
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8976
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087909411907951e-5
allele num: 16426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

DP
type: SiteQuality
SIO_000300: 2.016254e6

QD
type: SiteQuality
SIO_000300: 1.518e1

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1869
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8957
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4005
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25195
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8976
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.032e0

MQ
type: SiteQuality
SIO_000300: 5.82e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.425e1

VQSLOD
type: SiteQuality
SIO_000300: -3.809e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.146e0

DP
type: SiteQuality
SIO_000300: 2.01552e6

GenotypeQuality
all individuals: 8882
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3995
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2746
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8944
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24329
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4968
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1866
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.007337904486948e-5
allele num: 66504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.634e0

QD
type: SiteQuality
SIO_000300: 1.216e1

DP
type: SiteQuality
SIO_000300: 2.004871e6

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

MQRankSum
type: SiteQuality
SIO_000300: -4.63e-1

FS
type: SiteQuality
SIO_000300: 5.373e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.31e-1

GenotypeQuality
all individuals: 3987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24213
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2744
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3498
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8921
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4954
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503985561738607e-5
allele num: 66490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.942e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

QD
type: SiteQuality
SIO_000300: 1.371e1

FS
type: SiteQuality
SIO_000300: 1.292e0

VQSLOD
type: SiteQuality
SIO_000300: -4.373e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.477e0

DP
type: SiteQuality
SIO_000300: 2.002282e6

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1856
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22668
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8914
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3967
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4917
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15694
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508159140952553e-5
allele num: 66306
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.87e0

DP
type: SiteQuality
SIO_000300: 1.981376e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.402e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018959062915107e-5
allele num: 66248
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

DP
type: SiteQuality
SIO_000300: 1.971369e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -2.051e0

FS
type: SiteQuality
SIO_000300: 2.804e0

ClippingRankSum
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15532
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.931993817619784e-4
allele num: 10352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.678e0

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

QD
type: SiteQuality
SIO_000300: 1.288e1

DP
type: SiteQuality
SIO_000300: 1.962508e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514646632940535e-5
allele num: 66022
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: -2.126e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

FS
type: SiteQuality
SIO_000300: 6.329e0

QD
type: SiteQuality
SIO_000300: 4.56e0

DP
type: SiteQuality
SIO_000300: 1.951031e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514646632940535e-5
allele num: 66022
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.126e0

QD
type: SiteQuality
SIO_000300: 4.56e0

FS
type: SiteQuality
SIO_000300: 6.329e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
SIO_000300: 1.951031e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele frequency: 6.516356053694774e-5
allele num: 15346
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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QD
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65972
num of homozygotes: 0

African
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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BaseQRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele frequency: 9.667440061871617e-5
allele num: 10344
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65956
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
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BaseQRankSum
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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MQ
type: SiteQuality
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FS
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
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allele num: 11532
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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MQ
type: SiteQuality
SIO_000300: 5.79e1

ReadPosRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519064256418047e-5
allele num: 65830
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.20471894517696e-4
allele num: 11528
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15086
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Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
SIO_000300: 1.912471e6

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
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SIO_000300: 1.299e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.347e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65660
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.708737864077671e-5
allele num: 10300
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: 5.34e0

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.989e1

DP
type: SiteQuality
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QD
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SIO_000300: 1.636e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8508
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.537042729787888e-5
allele num: 65060
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.801349e6

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -1.6e-3

QD
type: SiteQuality
SIO_000300: 1.031e1

ClippingRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.76e-1

FS
type: SiteQuality
SIO_000300: 2.907e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15146
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528677999266235e-5
allele num: 65416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -1.961e0

DP
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SIO_000300: 2.614633e6

VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 1.525553012967201e-5
allele num: 65550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.911e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.488e1

QD
type: SiteQuality
SIO_000300: 3.05e0

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65556
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele num: 9964
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South Asian
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FS
type: SiteQuality
SIO_000300: 2.966e0

ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.661008141347653e-5
allele num: 11546
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African
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65556
num of homozygotes: 0

InbreedingCoeff
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DP
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 1.160092807424594e-4
allele num: 8620
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Other
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South Asian
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VQSLOD
type: SiteQuality
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MQRankSum
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ClippingRankSum
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DP
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FS
type: SiteQuality
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MQ
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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allele frequency: 2.909190605294422e-3
allele num: 65654
num of homozygotes: 0

European (Finnish)
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allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.997602876548142e-4
allele num: 10012
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Latino
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allele count: 8
allele frequency: 6.927606511950121e-4
allele num: 11548
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FS
type: SiteQuality
SIO_000300: 5.54e-1

BaseQRankSum
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31807
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3898
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10555
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522811719558994e-5
allele num: 65668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.996406468356957e-4
allele num: 10018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

MQ
type: SiteQuality
SIO_000300: 5.995e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-2

DP
type: SiteQuality
SIO_000300: 2.63935e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.01e-2

QD
type: SiteQuality
SIO_000300: 1.516e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

GenotypeQuality
all individuals: 10555
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31807
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522811719558994e-5
allele num: 65668
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.01e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

DP
type: SiteQuality
SIO_000300: 2.63935e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-2

QD
type: SiteQuality
SIO_000300: 1.516e1

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

MQ
type: SiteQuality
SIO_000300: 5.995e1

GenotypeQuality
all individuals: 2006
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2687
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11176
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15712
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65736
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 1.008e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.29e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 2.647398e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 2.739e0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 357
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3985
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31805
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1106
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65746
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.051e1

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.15e-1

DP
type: SiteQuality
SIO_000300: 2.648411e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

VQSLOD
type: SiteQuality
SIO_000300: -1.198e0

FS
type: SiteQuality
SIO_000300: 1.1113e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11842
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4075
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516346212167162e-5
allele num: 65948
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.154e0

QD
type: SiteQuality
SIO_000300: 9.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

FS
type: SiteQuality
SIO_000300: 1.0731e1

DP
type: SiteQuality
SIO_000300: 2.661522e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31817
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2099
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12443
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509980974239725e-5
allele num: 66226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.474e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

QD
type: SiteQuality
SIO_000300: 1.494e1

VQSLOD
type: SiteQuality
SIO_000300: 5.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 2.674807e6

GenotypeQuality
all individuals: 12458
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31824
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4246
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2811
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729804532087874e-4
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.554907677356657e-3
allele num: 10290
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.291e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

DP
type: SiteQuality
SIO_000300: 2.676048e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

GenotypeQuality
all individuals: 2285
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4223
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2090
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 518
allele frequency: 5.016463296533023e-2
allele num: 10326
num of homozygotes: 15

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 8.869179600886918e-3
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 66
allele frequency: 9.95114890537362e-4
allele num: 66324
num of homozygotes: 0

Latino
type: Population
allele count: 68
allele frequency: 5.881335409098772e-3
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

DP
type: SiteQuality
SIO_000300: 2.685468e6

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-3

FS
type: SiteQuality
SIO_000300: 1.097e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.65e-2

MQ
type: SiteQuality
SIO_000300: 5.997e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2324
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 4268
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variant carriers: 0

GenotypeQuality
all individuals: 2841
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31708
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506795648374167e-5
allele num: 66366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.385e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

QD
type: SiteQuality
SIO_000300: 9.029999999999999e0

DP
type: SiteQuality
SIO_000300: 2.674602e6

GenotypeQuality
all individuals: 2839
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQ
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DP
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QD
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FS
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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Other
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InbreedingCoeff
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele num: 66448
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Latino
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European (Finnish)
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East Asian
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African
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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VQSLOD
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FS
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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MQ
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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European (Finnish)
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQRankSum
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MQ
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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QD
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VQSLOD
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ReadPosRankSum
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MQ
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DP
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MQRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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VQSLOD
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QD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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South Asian
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European (Finnish)
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.585e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.69e-1

FS
type: SiteQuality
SIO_000300: 4.53e0

QD
type: SiteQuality
SIO_000300: 1.165e1

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

DP
type: SiteQuality
SIO_000300: 2.672074e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 67
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GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.308e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 4.6e0

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.26e-1

DP
type: SiteQuality
SIO_000300: 2.671339e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.950880444856349e-4
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.17e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.369e0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

DP
type: SiteQuality
SIO_000300: 2.669917e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.311457643446324e-4
allele num: 66436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.103e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

DP
type: SiteQuality
SIO_000300: 2.667471e6

MQRankSum
type: SiteQuality
SIO_000300: -1.57e-1

QD
type: SiteQuality
SIO_000300: 1.273e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.667440061871617e-5
allele num: 10344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010687942194791e-5
allele num: 66430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.667014e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

FS
type: SiteQuality
SIO_000300: 2.17e0

MQRankSum
type: SiteQuality
SIO_000300: 6.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505842669557885e-5
allele num: 66408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
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allele num: 10340
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.82e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.87e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.666394e6

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 20

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.011231894968232e-4
allele num: 66418
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
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South Asian
type: Population
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16508
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.900232018561485e-4
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.517528008673654e-5
allele num: 66408
num of homozygotes: 0

Other
type: Population
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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QD
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.528533140602885e-5
allele num: 66414
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
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South Asian
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East Asian
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African
type: Population
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Other
type: Population
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allele num: 896
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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DP
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MQRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 125
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GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31606
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011413256241154e-5
allele num: 66414
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.506e1

DP
type: SiteQuality
SIO_000300: 2.665816e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.907e1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 378
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2035
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.680542110358181e-5
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 8.05e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

DP
type: SiteQuality
SIO_000300: 2.664883e6

GenotypeQuality
all individuals: 2427
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
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GenotypeQuality
all individuals: 2315
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31608
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 12689
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.039956608208281e-5
allele num: 66372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.106e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.71e-1

QD
type: SiteQuality
SIO_000300: 1.247e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.664461e6

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12686
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66354
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

QD
type: SiteQuality
SIO_000300: 1.458e1

DP
type: SiteQuality
SIO_000300: 2.663888e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.74e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.694e-1

GenotypeQuality
all individuals: 125
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
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GenotypeQuality
all individuals: 2012
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12245
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.207182737286857e-4
allele num: 66270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.909796314258002e-4
allele num: 10310
num of homozygotes: 0

South Asian
type: Population
allele count: 37
allele frequency: 2.241337533317179e-3
allele num: 16508
num of homozygotes: 1

Latino
type: Population
allele count: 4
allele frequency: 3.460806367883717e-4
allele num: 11558
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.366e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 2.663897e6

GenotypeQuality
all individuals: 2717
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31690
bin: 9.75e1
variant carriers: 167

GenotypeQuality
all individuals: 2310
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4099
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12430
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.29757785467128e-3
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 137
allele frequency: 1.329322724626431e-2
allele num: 10306
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.414802740801111e-4
allele num: 66258
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.8e0

DP
type: SiteQuality
SIO_000300: 2.664298e6

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.172e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.232e1

GenotypeQuality
all individuals: 4117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
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variant carriers: 0

GenotypeQuality
all individuals: 12496
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31621
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2011
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018594542381067e-5
allele num: 66256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.281e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.83e-1

FS
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
SIO_000300: 2.661876e6

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12392
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31671
bin: 9.75e1
variant carriers: 156

South Asian
type: Population
allele count: 14
allele frequency: 8.48073661255149e-4
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 134
allele frequency: 1.557415155741516e-2
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.882741215298e-4
allele num: 10302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.529122256106766e-5
allele num: 66238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.06e0

DP
type: SiteQuality
SIO_000300: 2.6645e6

QD
type: SiteQuality
SIO_000300: 1.269e1

GenotypeQuality
all individuals: 126
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2719
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31646
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2424
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50993537476596e-5
allele num: 66228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 2.192e0

VQSLOD
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.376e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.183e1

DP
type: SiteQuality
SIO_000300: 2.662055e6

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31651
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2003
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.025443983904638e-5
allele num: 66106
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

QD
type: SiteQuality
SIO_000300: 1.09e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.344e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 3.948e0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.933e1

DP
type: SiteQuality
SIO_000300: 2.659977e6

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12233
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2406
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66082
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

DP
type: SiteQuality
SIO_000300: 2.658028e6

FS
type: SiteQuality
SIO_000300: 7.137e0

MQ
type: SiteQuality
SIO_000300: 5.863e1

QD
type: SiteQuality
SIO_000300: 1.502e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.09e-1

GenotypeQuality
all individuals: 2395
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12132
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31711
bin: 9.75e1
variant carriers: 146

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4022
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 7
allele frequency: 6.057459328487366e-4
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 139
allele frequency: 1.354247856586126e-2
allele num: 10264
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66018
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.13e-2

QD
type: SiteQuality
SIO_000300: 1.281e1

DP
type: SiteQuality
SIO_000300: 2.658751e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

GenotypeQuality
all individuals: 2312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2690
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31650
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4019
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65988
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.482e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

FS
type: SiteQuality
SIO_000300: 4.616e0

DP
type: SiteQuality
SIO_000300: 2.656516e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.29e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeQuality
all individuals: 2310
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3939
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31652
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.043862052171795e-5
allele num: 65706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.838646202282565e-5
allele num: 10164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.621e0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-1

QD
type: SiteQuality
SIO_000300: 1.057e1

FS
type: SiteQuality
SIO_000300: 1.094e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.644864e6

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525320317266626e-5
allele num: 65560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

QD
type: SiteQuality
SIO_000300: 1.375e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

FS
type: SiteQuality
SIO_000300: 4.985e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

VQSLOD
type: SiteQuality
SIO_000300: -5.934e-1

DP
type: SiteQuality
SIO_000300: 2.641836e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

GenotypeQuality
all individuals: 296
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31671
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2690
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11361
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529098749197223e-5
allele num: 65398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.640975e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.827e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 2.503e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.666e0

MQRankSum
type: SiteQuality
SIO_000300: 5.18e-1

GenotypeQuality
all individuals: 2371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3885
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31672
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65282
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212121212121212e-4
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.207e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

VQSLOD
type: SiteQuality
SIO_000300: 8.79e-1

DP
type: SiteQuality
SIO_000300: 2.639548e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.44e-1

QD
type: SiteQuality
SIO_000300: 1.509e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31671
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2323
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11323
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531675039823551e-5
allele num: 65288
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.75e-1

QD
type: SiteQuality
SIO_000300: 1.758e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.467e-1

FS
type: SiteQuality
SIO_000300: 5.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

DP
type: SiteQuality
SIO_000300: 2.63956e6

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31676
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3846
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11024
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.001200720432259e-4
allele num: 9994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65138
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.72e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.284e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.952e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e-1

DP
type: SiteQuality
SIO_000300: 2.636465e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11021
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2666
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.85e-1

QD
type: SiteQuality
SIO_000300: 1.119e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.605e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.36e-1

DP
type: SiteQuality
SIO_000300: 2.635783e6