11-82973051-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82973051
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82973051
    reference: chr 11
allele count: 1
allele frequency: 8.316284949187499e-6
allele num: 120246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*312-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.683-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.407-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*49-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1130-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*307-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.710-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*574-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.722-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*312-43A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.407-43A>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

11-82976856-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976856
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976856
    reference: chr 11
allele count: 1
allele frequency: 8.722350150024422e-6
allele num: 114648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3848C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+51C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+51C>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-82976856-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976856
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976856
    reference: chr 11
allele count: 1
allele frequency: 8.722350150024422e-6
allele num: 114648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3848C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+51C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+51C>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-82976856-GAACT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976856
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976852
    reference: chr 11
allele count: 10
allele frequency: 8.722350150024422e-5
allele num: 114648
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+47_*306+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+47_709+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+47_682+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+47_*1129+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+47_406+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3852_376-3849delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+47_*311+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+47_721+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+47_406+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+47_*573+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+47_*311+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+47_*48+50delAGTT
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13407
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: GAACT
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-82976863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976863
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976863
    reference: chr 11
allele count: 1
allele frequency: 8.711256685889507e-6
allele num: 114794
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3855G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+44G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+44G>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

11-82976864-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976864
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976864
    reference: chr 11
allele count: 1
allele frequency: 8.690060309018545e-6
allele num: 115074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3856T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+43T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+43T>C
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP

11-82976866-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976866
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976866
    reference: chr 11
allele count: 1
allele frequency: 8.690815546130848e-6
allele num: 115064
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3858C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+41C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+41C>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-82976866-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976866
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976866
    reference: chr 11
allele count: 1
allele frequency: 8.690815546130848e-6
allele num: 115064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3858C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+41C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+41C>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

11-82976872-T-TAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976872
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976874
    reference: chr 11
allele count: 1
allele frequency: 8.659658116697553e-6
allele num: 115478
alternate allele: TAG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+33_*311+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+33_*306+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+33_406+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+33_*573+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3866_376-3865dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+33_*48+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+33_*311+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+33_721+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+33_*1129+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+33_682+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+33_406+34dupCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+33_709+34dupCT
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

11-82976874-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976874
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976874
    reference: chr 11
allele count: 1
allele frequency: 8.577653497109331e-6
allele num: 116582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3866C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+33C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+33C>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17746
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

11-82976874-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976874
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976874
    reference: chr 11
allele count: 30041
allele frequency: 2.576812887066614e-1
allele num: 116582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3866C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+33C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+33C>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 3.75e1
  variant carriers: 2905
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 1.25e1
  variant carriers: 1096
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 1.75e1
  variant carriers: 2437
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.25e1
  variant carriers: 1829
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 363
genotype depth: GenotypeDepth
  all individuals: 17746
  bin: 2.25e1
  variant carriers: 3883
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 1112
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 5.25e1
  variant carriers: 682
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 3.25e1
  variant carriers: 4076
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1781
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 11931
  bin: 2.75e1
  variant carriers: 4409
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 204
genotype quality: GenotypeQuality
num of homozygotes: 3972
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

11-82976877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976877
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976877
    reference: chr 11
allele count: 1
allele frequency: 8.507307777380771e-6
allele num: 117546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3869C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+30C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+30C>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-82976879-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976879
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976879
    reference: chr 11
allele count: 1
allele frequency: 8.501377223110144e-6
allele num: 117628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3871G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+28G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+28G>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

11-82976881-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976881
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976881
    reference: chr 11
allele count: 1
allele frequency: 8.483347189467077e-6
allele num: 117878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3873C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+26C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+26C>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

11-82976882-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976882
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976882
    reference: chr 11
allele count: 1
allele frequency: 8.475725522104692e-6
allele num: 117984
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3874G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+25G>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-82976892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976892
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976892
    reference: chr 11
allele count: 1
allele frequency: 8.401666890711118e-6
allele num: 119024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3884G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+15G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+15G>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

11-82976899-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976899
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976899
    reference: chr 11
allele count: 1
allele frequency: 8.345155637152633e-6
allele num: 119830
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+8T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3891T>C
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.709+8T>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

11-82976903-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976903
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976903
    reference: chr 11
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.406+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*311+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.709+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.721+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*306+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1129+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*48+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.406+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*311+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*573+4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3895A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.682+4A>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.709+4A>G
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

11-82976918-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976918
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976918
    reference: chr 11
allele count: 3
allele frequency: 2.482868209355447e-5
allele num: 120828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*295G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*37G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*300G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.710G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.395G>A
  hgvsp: ENSP00000431424.1:p.Arg132His
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*562G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1118G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.698G>A
  hgvsp: ENSP00000434724.1:p.Arg233His
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*300G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.395G>A
  hgvsp: ENSP00000431345.1:p.Arg132His
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.671G>A
  hgvsp: ENSP00000390990.2:p.Arg224His
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3910G>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26306
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg233His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

11-82976919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976919
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976919
    reference: chr 11
allele count: 5
allele frequency: 4.136128253064871e-5
allele num: 120886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*294C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*299C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.394C>T
  hgvsp: ENSP00000431424.1:p.Arg132Cys
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*299C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.670C>T
  hgvsp: ENSP00000390990.2:p.Arg224Cys
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*36C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.697C>T
  hgvsp: ENSP00000434724.1:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*561C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.394C>T
  hgvsp: ENSP00000431345.1:p.Arg132Cys
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1117C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.709C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3911C>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg233Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-82976919-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976919
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976919
    reference: chr 11
allele count: 3
allele frequency: 2.481676951838923e-5
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.697C>A
  hgvsp: ENSP00000434724.1:p.Arg233Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.709C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*299C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.394C>A
  hgvsp: ENSP00000431345.1:p.Arg132Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3911C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1117C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.394C>A
  hgvsp: ENSP00000431424.1:p.Arg132Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.670C>A
  hgvsp: ENSP00000390990.2:p.Arg224Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*36C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*561C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*299C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*294C>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg233Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-82976921-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976921
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976921
    reference: chr 11
allele count: 1
allele frequency: 8.266785708380868e-6
allele num: 120966
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.392T>G
  hgvsp: ENSP00000431345.1:p.Ile131Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*34T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*559T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1115T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.392T>G
  hgvsp: ENSP00000431424.1:p.Ile131Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*292T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.695T>G
  hgvsp: ENSP00000434724.1:p.Ile232Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*297T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3913T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*297T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.668T>G
  hgvsp: ENSP00000390990.2:p.Ile223Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.707T>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile232Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

11-82976921-ATTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976921
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976918
    reference: chr 11
allele count: 1
allele frequency: 8.266785708380868e-6
allele num: 120966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*556_*558delCAA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*289_*291delCAA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.665_667delCAA
  hgvsp: ENSP00000390990.2:p.Thr222del
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.389_391delCAA
  hgvsp: ENSP00000431345.1:p.Thr130del
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.692_694delCAA
  hgvsp: ENSP00000434724.1:p.Thr231del
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.389_391delCAA
  hgvsp: ENSP00000431424.1:p.Thr130del
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*294_*296delCAA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.704_706delCAA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1112_*1114delCAA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*31_*33delCAA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*294_*296delCAA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3916_376-3914delCAA
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr231del
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: ATTG
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

11-82976924-G-GAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976924
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976926
    reference: chr 11
allele count: 1
allele frequency: 8.264599414866361e-6
allele num: 120998
alternate allele: GAA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.691_692insTT
  hgvsp: ENSP00000434724.1:p.Thr231IlefsTer16
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*288_*289insTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*30_*31insTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*555_*556insTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3917_376-3916insTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1111_*1112insTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*293_*294insTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.388_389insTT
  hgvsp: ENSP00000431345.1:p.Thr130IlefsTer16
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.388_389insTT
  hgvsp: ENSP00000431424.1:p.Thr130IlefsTer16
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.703_704insTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*293_*294insTT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.664_665insTT
  hgvsp: ENSP00000390990.2:p.Thr222IlefsTer16
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr231IlefsTer16
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

11-82976933-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976933
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976933
    reference: chr 11
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.683A>G
  hgvsp: ENSP00000434724.1:p.Lys228Arg
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.695A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*285A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*285A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3925A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*352A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.380A>G
  hgvsp: ENSP00000431345.1:p.Lys127Arg
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1103A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.380A>G
  hgvsp: ENSP00000431424.1:p.Lys127Arg
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.656A>G
  hgvsp: ENSP00000390990.2:p.Lys219Arg
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*547A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*280A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*22A>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys228Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

11-82976934-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976934
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976934
    reference: chr 11
allele count: 1
allele frequency: 8.254911672445104e-6
allele num: 121140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.655A>T
  hgvsp: ENSP00000390990.2:p.Lys219Ter
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.379A>T
  hgvsp: ENSP00000431345.1:p.Lys127Ter
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.682A>T
  hgvsp: ENSP00000434724.1:p.Lys228Ter
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*351A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*21A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.379A>T
  hgvsp: ENSP00000431424.1:p.Lys127Ter
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*279A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*284A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.694A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*546A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3926A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*284A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1102A>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys228Ter
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

11-82976938-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976938
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976938
    reference: chr 11
allele count: 2
allele frequency: 1.650628063978344e-5
allele num: 121166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*347T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.651T>C
  hgvsp: ENST00000455220.2:c.651T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.678T>C
  hgvsp: ENST00000529689.1:c.678T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*280T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*542T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*17T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1098T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*275T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.375T>C
  hgvsp: ENST00000525503.1:c.375T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.375T>C
  hgvsp: ENST00000529611.1:c.375T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3930T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.690T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*280T>C
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser226Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

11-82976939-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976939
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976939
    reference: chr 11
allele count: 4
allele frequency: 3.300711303285858e-5
allele num: 121186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.374C>G
  hgvsp: ENSP00000431345.1:p.Ser125Cys
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.650C>G
  hgvsp: ENSP00000390990.2:p.Ser217Cys
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*279C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1097C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3931C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.689C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*346C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*541C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*274C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.374C>G
  hgvsp: ENSP00000431424.1:p.Ser125Cys
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.677C>G
  hgvsp: ENSP00000434724.1:p.Ser226Cys
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*279C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*16C>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser226Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

11-82976949-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976949
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976949
    reference: chr 11
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*269C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3941C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*635C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1087C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.364C>A
  hgvsp: ENSP00000431345.1:p.Leu122Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.640C>A
  hgvsp: ENSP00000390990.2:p.Leu214Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*264C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.679C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.667C>A
  hgvsp: ENSP00000434724.1:p.Leu223Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*531C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*269C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.364C>A
  hgvsp: ENSP00000431424.1:p.Leu122Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*6C>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*336C>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu223Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-82976952-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976952
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976952
    reference: chr 11
allele count: 6
allele frequency: 4.948861761794787e-5
allele num: 121240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*266A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.676A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.*3A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.361A>T
  hgvsp: ENSP00000431424.1:p.Thr121Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*333A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1084A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*632A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*266A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.664A>T
  hgvsp: ENSP00000434724.1:p.Thr222Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*528A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.361A>T
  hgvsp: ENSP00000431345.1:p.Thr121Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*261A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3944A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.637A>T
  hgvsp: ENSP00000390990.2:p.Thr213Ser
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr222Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

11-82976959-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976959
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976959
    reference: chr 11
allele count: 76
allele frequency: 6.268971888610268e-4
allele num: 121232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3951C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*259C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.630C>T
  hgvsp: ENST00000455220.2:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*741C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1077C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.623C>T
  hgvsp: ENSP00000431523.1:p.Pro208Leu
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.657C>T
  hgvsp: ENST00000529689.1:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.354C>T
  hgvsp: ENST00000529611.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*259C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*326C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*521C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*625C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*254C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.354C>T
  hgvsp: ENST00000525503.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.669C>T
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: p.Pro208Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

11-82976963-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976963
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976963
    reference: chr 11
allele count: 2
allele frequency: 1.649647800194658e-5
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3955C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.653C>T
  hgvsp: ENSP00000434724.1:p.Ala218Val
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.626C>T
  hgvsp: ENSP00000390990.2:p.Ala209Val
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.350C>T
  hgvsp: ENSP00000431424.1:p.Ala117Val
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.350C>T
  hgvsp: ENSP00000431345.1:p.Ala117Val
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*737C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.665C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*255C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*517C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*621C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*255C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*322C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.619C>T
  hgvsp: ENSP00000431523.1:p.Leu207Phe
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*250C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1073C>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala218Val
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/11-82976964-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976964
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976964
    reference: chr 11
allele count: 2
allele frequency: 1.649620587264929e-5
allele num: 121240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*249G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.349G>T
  hgvsp: ENSP00000431424.1:p.Ala117Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*516G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.652G>T
  hgvsp: ENSP00000434724.1:p.Ala218Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1072G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.625G>T
  hgvsp: ENSP00000390990.2:p.Ala209Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.349G>T
  hgvsp: ENSP00000431345.1:p.Ala117Ser
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3956G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*321G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*254G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.618G>T
  hgvsp: ENSP00000431523.1:p.Leu206Phe
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*254G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*620G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*736G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.664G>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala218Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-82976966-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976966
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976966
    reference: chr 11
allele count: 30
allele frequency: 2.474512521033356e-4
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*252T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.650T>C
  hgvsp: ENSP00000434724.1:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*247T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1070T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.616T>C
  hgvsp: ENST00000529073.1:c.616T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*252T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.623T>C
  hgvsp: ENSP00000390990.2:p.Ile208Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.347T>C
  hgvsp: ENSP00000431345.1:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3958T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.662T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.347T>C
  hgvsp: ENSP00000431424.1:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*319T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*514T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*734T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*618T>C
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile217Thr
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

11-82976970-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976970
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976970
    reference: chr 11
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1066G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*315G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.619G>C
  hgvsp: ENSP00000390990.2:p.Glu207Gln
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*243G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*248G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.343G>C
  hgvsp: ENSP00000431424.1:p.Glu115Gln
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.343G>C
  hgvsp: ENSP00000431345.1:p.Glu115Gln
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.658G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.646G>C
  hgvsp: ENSP00000434724.1:p.Glu216Gln
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3962G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.612G>C
  hgvsp: ENST00000529073.1:c.612G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*614G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*730G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*248G>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*510G>C
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu216Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/11-82976970-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976970
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976969
    reference: chr 11
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*509delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*247delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*242delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*314delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.342delT
  hgvsp: ENSP00000431424.1:p.Glu115LysfsTer5
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.657delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.618delT
  hgvsp: ENSP00000390990.2:p.Glu207LysfsTer5
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.611delT
  hgvsp: ENSP00000431523.1:p.Leu204ArgfsTer12
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.645delT
  hgvsp: ENSP00000434724.1:p.Glu216LysfsTer5
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1065delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.342delT
  hgvsp: ENSP00000431345.1:p.Glu115LysfsTer5
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*613delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*729delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3963delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*247delT
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu216LysfsTer5
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: CA
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-82976972-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976972
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976972
    reference: chr 11
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.341C>G
  hgvsp: ENSP00000431424.1:p.Ala114Gly
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*612C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*728C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.341C>G
  hgvsp: ENSP00000431345.1:p.Ala114Gly
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3964C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*241C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.656C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.644C>G
  hgvsp: ENSP00000434724.1:p.Ala215Gly
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.610C>G
  hgvsp: ENSP00000431523.1:p.Leu204Val
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*313C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.617C>G
  hgvsp: ENSP00000390990.2:p.Ala206Gly
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*246C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*246C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1064C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*508C>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala215Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-82976973-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976973
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976973
    reference: chr 11
allele count: 11
allele frequency: 9.073362258112411e-5
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3965G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.655G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*507G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.616G>A
  hgvsp: ENSP00000390990.2:p.Ala206Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*611G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.340G>A
  hgvsp: ENSP00000431424.1:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.340G>A
  hgvsp: ENSP00000431345.1:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*312G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*240G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.609G>A
  hgvsp: ENST00000529073.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.643G>A
  hgvsp: ENSP00000434724.1:p.Ala215Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*727G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1063G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*245G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*245G>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala215Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

11-82976974-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976974
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976974
    reference: chr 11
allele count: 7
allele frequency: 5.774243574091794e-5
allele num: 121228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*506C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*311C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3966C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1062C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*610C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.339C>T
  hgvsp: ENST00000529611.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.339C>T
  hgvsp: ENST00000525503.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*244C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.608C>T
  hgvsp: ENSP00000431523.1:p.Thr203Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.615C>T
  hgvsp: ENST00000455220.2:c.615C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.642C>T
  hgvsp: ENST00000529689.1:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*244C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.654C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*726C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*239C>T
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr203Met
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-82976977-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976977
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976977
    reference: chr 11
allele count: 2
allele frequency: 1.649756660892518e-5
allele num: 121230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.336T>G
  hgvsp: ENSP00000431345.1:p.Ile112Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*503T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*241T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.612T>G
  hgvsp: ENSP00000390990.2:p.Ile204Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.605T>G
  hgvsp: ENSP00000431523.1:p.Leu202Trp
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*241T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*236T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*308T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*607T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*723T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.336T>G
  hgvsp: ENSP00000431424.1:p.Ile112Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1059T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.639T>G
  hgvsp: ENSP00000434724.1:p.Ile213Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3969T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.651T>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile213Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

11-82976978-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976978
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976978
    reference: chr 11
allele count: 252
allele frequency: 2.078761981753089e-3
allele num: 121226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.611T>C
  hgvsp: ENSP00000390990.2:p.Ile204Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*502T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*240T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*606T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3970T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*722T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.335T>C
  hgvsp: ENSP00000431345.1:p.Ile112Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.650T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.604T>C
  hgvsp: ENST00000529073.1:c.604T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*307T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1058T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*240T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.335T>C
  hgvsp: ENSP00000431424.1:p.Ile112Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.638T>C
  hgvsp: ENSP00000434724.1:p.Ile213Thr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*235T>C
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
hgvs: p.Ile213Thr
num of homozygotes: 2
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

11-82976978-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976978
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976978
    reference: chr 11
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1058T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.611T>A
  hgvsp: ENSP00000390990.2:p.Ile204Asn
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*606T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*722T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.638T>A
  hgvsp: ENSP00000434724.1:p.Ile213Asn
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.650T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*307T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.604T>A
  hgvsp: ENSP00000431523.1:p.Leu202Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*240T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*502T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.335T>A
  hgvsp: ENSP00000431424.1:p.Ile112Asn
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.335T>A
  hgvsp: ENSP00000431345.1:p.Ile112Asn
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*240T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*235T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3970T>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20406
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile213Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

11-82976988-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976988
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976988
    reference: chr 11
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*712A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1048A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.325A>G
  hgvsp: ENSP00000431345.1:p.Ser109Gly
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.601A>G
  hgvsp: ENSP00000390990.2:p.Ser201Gly
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.594A>G
  hgvsp: ENST00000529073.1:c.594A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.325A>G
  hgvsp: ENSP00000431424.1:p.Ser109Gly
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.628A>G
  hgvsp: ENSP00000434724.1:p.Ser210Gly
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.640A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*225A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*596A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*230A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*297A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3980A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*230A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*492A>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser210Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

11-82976989-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976989
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976989
    reference: chr 11
allele count: 8
allele frequency: 6.603275224511358e-5
allele num: 121152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.324C>G
  hgvsp: ENST00000529611.1:c.324C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*229C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*229C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.324C>G
  hgvsp: ENST00000525503.1:c.324C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*296C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*491C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*595C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.593C>G
  hgvsp: ENSP00000431523.1:p.Pro198Arg
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*711C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.600C>G
  hgvsp: ENST00000455220.2:c.600C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.627C>G
  hgvsp: ENST00000529689.1:c.627C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3981C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.639C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1047C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*224C>G
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro198Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-82976992-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976992
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976992
    reference: chr 11
allele count: 3
allele frequency: 2.476964232636481e-5
allele num: 121116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3984G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.636G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*488G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.624G>T
  hgvsp: ENSP00000434724.1:p.Glu208Asp
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.590G>T
  hgvsp: ENSP00000431523.1:p.Arg197Ile
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*592G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*221G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.321G>T
  hgvsp: ENSP00000431424.1:p.Glu107Asp
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*226G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*293G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1044G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.321G>T
  hgvsp: ENSP00000431345.1:p.Glu107Asp
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*708G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*226G>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.597G>T
  hgvsp: ENSP00000390990.2:p.Glu199Asp
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu208Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

11-82976998-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82976998
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82976998
    reference: chr 11
allele count: 1
allele frequency: 8.261868173631421e-6
allele num: 121038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.315T>A
  hgvsp: ENST00000529611.1:c.315T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.584T>A
  hgvsp: ENSP00000431523.1:p.Phe195Tyr
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.591T>A
  hgvsp: ENST00000455220.2:c.591T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*287T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*702T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*220T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*215T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.618T>A
  hgvsp: ENST00000529689.1:c.618T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*482T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1038T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*220T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.315T>A
  hgvsp: ENST00000525503.1:c.315T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3990T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*586T>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.630T>A
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe195Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-82977001-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977001
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977001
    reference: chr 11
allele count: 1
allele frequency: 8.266649031148734e-6
allele num: 120968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*284T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*217T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.581T>G
  hgvsp: ENSP00000431523.1:p.Leu194Ter
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.588T>G
  hgvsp: ENSP00000390990.2:p.Ile196Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3993T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.627T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.312T>G
  hgvsp: ENSP00000431345.1:p.Ile104Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.312T>G
  hgvsp: ENSP00000431424.1:p.Ile104Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*217T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.615T>G
  hgvsp: ENSP00000434724.1:p.Ile205Met
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*699T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*479T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*212T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1035T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*583T>G
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu194Ter
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

11-82977004-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977004
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977004
    reference: chr 11
allele count: 1
allele frequency: 8.272940865018697e-6
allele num: 120876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*476T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*580T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.309T>C
  hgvsp: ENST00000529611.1:c.309T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*281T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.578T>C
  hgvsp: ENSP00000431523.1:p.Val193Ala
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*214T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*696T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.585T>C
  hgvsp: ENST00000455220.2:c.585T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.612T>C
  hgvsp: ENST00000529689.1:c.612T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.624T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.309T>C
  hgvsp: ENST00000525503.1:c.309T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1032T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3996T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*214T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*209T>C
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val193Ala
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

11-82977007-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977007
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977007
    reference: chr 11
allele count: 2
allele frequency: 1.655903295247558e-5
allele num: 120780
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.306A>G
  hgvsp: ENST00000525503.1:c.306A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*211A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*473A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.582A>G
  hgvsp: ENST00000455220.2:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*693A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.575A>G
  hgvsp: ENSP00000431523.1:p.Lys192Arg
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.306A>G
  hgvsp: ENST00000529611.1:c.306A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*577A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*278A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-3999A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*206A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1029A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*211A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.609A>G
  hgvsp: ENST00000529689.1:c.609A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.621A>G
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys192Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

11-82977009-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977009
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977009
    reference: chr 11
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1027A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*204A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*209A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.304A>G
  hgvsp: ENSP00000431345.1:p.Lys102Glu
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*209A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*691A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.619A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.607A>G
  hgvsp: ENSP00000434724.1:p.Lys203Glu
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.304A>G
  hgvsp: ENSP00000431424.1:p.Lys102Glu
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*276A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*575A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*471A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.573A>G
  hgvsp: ENST00000529073.1:c.573A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-4001A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.580A>G
  hgvsp: ENSP00000390990.2:p.Lys194Glu
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys203Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

11-82977025-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977025
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977025
    reference: chr 11
allele count: 1
allele frequency: 8.397574780403419e-6
allele num: 119082
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*197-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.292-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*192-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*563-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.607-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*264-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.595-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.568-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.561-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.292-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*459-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-4017A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*679-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*197-4A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1015-4A>G
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.595-4A>G
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

11-82977032-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977032
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977032
    reference: chr 11
allele count: 23
allele frequency: 1.955117307038422e-4
allele num: 117640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.292-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*459-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.595-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*679-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.561-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*197-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.292-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.607-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-4024G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*192-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*563-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*264-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*197-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1015-11G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.568-11G>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19356
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-82977035-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977035
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977035
    reference: chr 11
allele count: 6
allele frequency: 5.131011835533967e-5
allele num: 116936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.292-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*197-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*679-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*563-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.568-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.607-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1015-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.595-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-4027C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*197-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*264-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*459-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.561-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*192-14C>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.292-14C>T
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18695
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

11-82977037-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977037
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977037
    reference: chr 11
allele count: 1
allele frequency: 8.562083668681611e-6
allele num: 116794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.607-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.595-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.292-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.568-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*197-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.561-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*459-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*197-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*264-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-4029T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*679-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.292-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*563-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*192-16T>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1015-16T>C
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

11-82977039-AAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977039
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977037
    reference: chr 11
allele count: 7
allele frequency: 6.019848299822844e-5
allele num: 116282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-4033_376-4032delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*192-20_*192-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1015-20_*1015-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.607-20_607-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.595-20_595-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*563-20_*563-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*197-20_*197-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*679-20_*679-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.292-20_292-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.292-20_292-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.561-20_561-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*197-20_*197-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*459-20_*459-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*264-20_*264-19delCT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.568-20_568-19delCT
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17097
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5222
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: AAG
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS

11-82977046-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82977046
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82977046
    reference: chr 11
allele count: 1
allele frequency: 8.656659568205821e-6
allele num: 115518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.561-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*197-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.292-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.292-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*1015-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.568-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*563-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl transcript: ENST00000525504
  gene symbol: CCDC90B
  hgvsc: ENST00000525504.1:n.607-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.376-4038G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.595-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*192-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*459-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*679-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*264-25G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*197-25G>A
  variant of: http://identifiers.org/hgnc/28108
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ

11-82984640-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984640
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984640
    reference: chr 11
allele count: 1
allele frequency: 1.095146311547223e-5
allele num: 91312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*892A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+50A>T
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+50A>T
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS

11-82984640-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984640
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984640
    reference: chr 11
allele count: 1
allele frequency: 1.095146311547223e-5
allele num: 91312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*892A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+50A>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+50A>G
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12590
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

11-82984642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984642
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984642
    reference: chr 11
allele count: 1
allele frequency: 1.102317070482153e-5
allele num: 90718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*890G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+48G>A
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+48G>A
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10784
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/11-82984651-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984651
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984651
    reference: chr 11
allele count: 1
allele frequency: 1.090869422930075e-5
allele num: 91670
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*881T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+39T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+39T>G
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-82984660-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984660
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984659
    reference: chr 11
allele count: 3
allele frequency: 3.243243243243243e-5
allele num: 92500
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*871delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+29delT
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+29delT
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14889
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5922
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: CA
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-82984663-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984663
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984663
    reference: chr 11
allele count: 4
allele frequency: 4.296824646586173e-5
allele num: 93092
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*869T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+27T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+27T>G
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

11-82984667-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984667
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984667
    reference: chr 11
allele count: 1
allele frequency: 1.066257223892692e-5
allele num: 93786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*865C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+23C>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+23C>G
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17086
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

11-82984670-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984670
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984671
    reference: chr 11
allele count: 8
allele frequency: 8.466145998687747e-5
allele num: 94494
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*861dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+19dupA
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+19dupA
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-82984671-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984671
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984671
    reference: chr 11
allele count: 1
allele frequency: 1.05572095183801e-5
allele num: 94722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431523
  ensembl transcript: ENST00000529073
  gene symbol: CCDC90B
  hgvsc: ENST00000529073.1:c.560+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433992
  ensembl transcript: ENST00000528149
  gene symbol: CCDC90B
  hgvsc: ENST00000528149.1:c.*678+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000260054
  ensembl transcript: ENST00000260054
  gene symbol: CCDC90B
  hgvsc: ENST00000260054.4:c.*191+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434724
  ensembl transcript: ENST00000529689
  gene symbol: CCDC90B
  hgvsc: ENST00000529689.1:c.594+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*861A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431345
  ensembl transcript: ENST00000529611
  gene symbol: CCDC90B
  hgvsc: ENST00000529611.1:c.291+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434078
  ensembl transcript: ENST00000529856
  gene symbol: CCDC90B
  hgvsc: ENST00000529856.1:c.*196+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434775
  ensembl transcript: ENST00000527025
  gene symbol: CCDC90B
  hgvsc: ENST00000527025.1:c.*562+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432646
  ensembl transcript: ENST00000534753
  gene symbol: CCDC90B
  hgvsc: ENST00000534753.1:c.*263+19A>C
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000434242
  ensembl transcript: ENST00000529745
  gene symbol: CCDC90B
  hgvsc: ENST00000529745.1:c.*196+19A>C
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-82984678-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82984678
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 82984678
    reference: chr 11
allele count: 1
allele frequency: 1.038982628210456e-5
allele num: 96248
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000433201
  ensembl transcript: ENST00000533761
  gene symbol: CCDC90B
  hgvsc: ENST00000533761.1:c.*842+12T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432115
  ensembl transcript: ENST00000529312
  gene symbol: CCDC90B
  hgvsc: ENST00000529312.1:c.*458+12T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000432999
  ensembl transcript: ENST00000526265
  gene symbol: CCDC90B
  hgvsc: ENST00000526265.1:c.*854T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000390990
  ensembl transcript: ENST00000455220
  gene symbol: CCDC90B
  hgvsc: ENST00000455220.2:c.567+12T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000431424
  ensembl transcript: ENST00000525503
  gene symbol: CCDC90B
  hgvsc: ENST00000525503.1:c.291+12T>G
  variant of: http://identifiers.org/hgnc/28108
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137500
  ensembl protein: ENSP00000436974
  ensembl transcript: ENST00000527495
  gene symbol: CCDC90B
  hgvsc: ENST00000527495.1:c.375+12T>G
  variant of: http://identifiers.org/hgnc/28108
canonical: false
consequence: 3' UTR
filter: PASS
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 5607
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3136
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3467
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34920
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3087
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5253
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.689922480620155e-5
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66352
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

DP
type: SiteQuality
SIO_000300: 3.240435e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

VQSLOD
type: SiteQuality
SIO_000300: 8.98e-1

FS
type: SiteQuality
SIO_000300: 5.498e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.752e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-1

GenotypeDepth
all individuals: 640
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8147
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4998
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12039
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5224
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4183
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.992029086841001e-5
allele num: 14302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.256e0

MQ
type: SiteQuality
SIO_000300: 5.404e1

FS
type: SiteQuality
SIO_000300: 1.207e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

DP
type: SiteQuality
SIO_000300: 1.757221e6

QD
type: SiteQuality
SIO_000300: 1.252e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

GenotypeDepth
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12039
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4998
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8147
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 720
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5224
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.992029086841001e-5
allele num: 14302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.404e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

DP
type: SiteQuality
SIO_000300: 1.757221e6

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

FS
type: SiteQuality
SIO_000300: 1.207e0

QD
type: SiteQuality
SIO_000300: 1.252e1

MQRankSum
type: SiteQuality
SIO_000300: -1.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

GenotypeDepth
all individuals: 539
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5224
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8147
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 2407
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12039
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4998
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.151095005514416e-5
allele num: 63470
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.910167818361303e-4
allele num: 10130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.16822429906542e-3
allele num: 856
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.256e0

MQ
type: SiteQuality
SIO_000300: 5.404e1

FS
type: SiteQuality
SIO_000300: 1.207e0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

DP
type: SiteQuality
SIO_000300: 1.757221e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 1.252e1

GenotypeDepth
all individuals: 155
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2423
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3986
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2879
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8140
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 395
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20415
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1397
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4764
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.975049362771496e-5
allele num: 11142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63554
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.816e0

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

DP
type: SiteQuality
SIO_000300: 1.785057e6

QD
type: SiteQuality
SIO_000300: 8.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeDepth
all individuals: 2423
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1933
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21122
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2966
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8146
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2348
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4826
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570055893989826e-5
allele num: 63692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.343e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.33e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.790459e6

GenotypeDepth
all individuals: 539
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3650
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2404
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4834
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22509
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 746
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2353
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570598397989634e-5
allele num: 63670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.539e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.277e0

DP
type: SiteQuality
SIO_000300: 1.800416e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeDepth
all individuals: 423
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2423
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2404
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2353
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3650
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22509
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4834
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14396
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.859988168014199e-5
allele num: 10142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-3

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.277e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.539e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

DP
type: SiteQuality
SIO_000300: 1.800416e6

GenotypeDepth
all individuals: 3065
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 640
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5070
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2839
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1821
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.920606601248885e-5
allele num: 11210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.741e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.830465e6

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.535e0

GenotypeDepth
all individuals: 425
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11931
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27011
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 174
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18399
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.197604790419162e-4
allele num: 8350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64412
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.246e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.41e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

QD
type: SiteQuality
SIO_000300: 1.946e1

FS
type: SiteQuality
SIO_000300: 9.340000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.086245e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.33e-1

GenotypeDepth
all individuals: 293
bin: 8.25e1
variant carriers: 182

GenotypeDepth
all individuals: 334
bin: 7.25e1
variant carriers: 205

GenotypeQuality
all individuals: 18399
bin: 6.25e1
variant carriers: 235

GenotypeQuality
all individuals: 1628
bin: 3.25e1
variant carriers: 88

GenotypeQuality
all individuals: 594
bin: 9.25e1
variant carriers: 299

GenotypeQuality
all individuals: 964
bin: 2.75e1
variant carriers: 55

GenotypeQuality
all individuals: 1059
bin: 7.75e1
variant carriers: 296

GenotypeQuality
all individuals: 855
bin: 7.25e1
variant carriers: 141

GenotypeQuality
all individuals: 418
bin: 5.75e1
variant carriers: 108

GenotypeQuality
all individuals: 767
bin: 8.25e1
variant carriers: 291

GenotypeQuality
all individuals: 174
bin: 1.75e1
variant carriers: 45

GenotypeQuality
all individuals: 766
bin: 4.75e1
variant carriers: 142

GenotypeQuality
all individuals: 704
bin: 4.25e1
variant carriers: 82

GenotypeQuality
all individuals: 123
bin: 1.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1761
bin: 2.25e1
variant carriers: 56

GenotypeQuality
all individuals: 557
bin: 5.25e1
variant carriers: 170

GenotypeQuality
all individuals: 244
bin: 2.5e0
variant carriers: 25

GenotypeQuality
all individuals: 157
bin: 7.5e0
variant carriers: 26

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 165

GenotypeQuality
all individuals: 27011
bin: 9.75e1
variant carriers: 23826

GenotypeQuality
all individuals: 2642
bin: 6.75e1
variant carriers: 229

GenotypeQuality
all individuals: 1494
bin: 3.75e1
variant carriers: 101

Other
type: Population
allele count: 246
allele frequency: 2.827586206896552e-1
allele num: 870
num of homozygotes: 40

European (Finnish)
type: Population
allele count: 2212
allele frequency: 3.381228981962702e-1
allele num: 6542
num of homozygotes: 407

Latino
type: Population
allele count: 1355
allele frequency: 1.208742194469224e-1
allele num: 11210
num of homozygotes: 112

East Asian
type: Population
allele count: 2146
allele frequency: 2.570059880239521e-1
allele num: 8350
num of homozygotes: 263

South Asian
type: Population
allele count: 3234
allele frequency: 2.158014146536768e-1
allele num: 14986
num of homozygotes: 321

African
type: Population
allele count: 2635
allele frequency: 2.580297688993341e-1
allele num: 10212
num of homozygotes: 327

European (Non-Finnish)
type: Population
allele count: 18213
allele frequency: 2.827578712041234e-1
allele num: 64412
num of homozygotes: 2502

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.41e-2

DP
type: SiteQuality
SIO_000300: 2.086245e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.246e0

FS
type: SiteQuality
SIO_000300: 9.340000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.33e-1

GenotypeDepth
all individuals: 188
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 450
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5558
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6117
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1897
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65020
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.647168306301516e-5
allele num: 15044
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.881e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.082e0

DP
type: SiteQuality
SIO_000300: 1.794181e6

MQ
type: SiteQuality
SIO_000300: 5.923e1

QD
type: SiteQuality
SIO_000300: 2.881e1

GenotypeDepth
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 450
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1539
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6114
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34594
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65120
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.750390015600624e-5
allele num: 10256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15000
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.801899e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.038e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.784e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.337e0

MQ
type: SiteQuality
SIO_000300: 5.782e1

QD
type: SiteQuality
SIO_000300: 1.362e1

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

GenotypeDepth
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2284
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35527
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1620
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1319
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6111
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15090
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533695285420693e-5
allele num: 65202
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-1

DP
type: SiteQuality
SIO_000300: 1.809272e6

MQRankSum
type: SiteQuality
SIO_000300: 7.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.309e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeDepth
all individuals: 5798
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1840
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35995
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5605
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6111
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1385
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.626027034190299e-5
allele num: 15092
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.859e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

DP
type: SiteQuality
SIO_000300: 1.813405e6

FS
type: SiteQuality
SIO_000300: 5.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.133e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.915e0

GenotypeDepth
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39555
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6113
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 587
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5697
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15408
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.639e0

DP
type: SiteQuality
SIO_000300: 1.843493e6

MQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

GenotypeDepth
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1840
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 300
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 373
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6110
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5815
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41506
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66116
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

FS
type: SiteQuality
SIO_000300: 1.234e0

VQSLOD
type: SiteQuality
SIO_000300: -3.837e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 5.734e1

QD
type: SiteQuality
SIO_000300: 1.469e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

DP
type: SiteQuality
SIO_000300: 1.862249e6

GenotypeDepth
all individuals: 19765
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 939
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 450
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6109
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 661
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41947
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

DP
type: SiteQuality
SIO_000300: 1.868069e6

FS
type: SiteQuality
SIO_000300: 1.336e0

MQRankSum
type: SiteQuality
SIO_000300: -8.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.37e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.401e1

GenotypeDepth
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 938
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6108
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42919
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5945
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.138735420503377e-5
allele num: 16290
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50407604608489e-5
allele num: 66486
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.499e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.011e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

FS
type: SiteQuality
SIO_000300: 3.549e0

QD
type: SiteQuality
SIO_000300: 9.75e0

DP
type: SiteQuality
SIO_000300: 1.882128e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.88e-1

GenotypeDepth
all individuals: 449
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1544
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 1841
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6113
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.014675808973896e-5
allele num: 66504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.127450980392157e-5
allele num: 16320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

DP
type: SiteQuality
SIO_000300: 1.882871e6

QD
type: SiteQuality
SIO_000300: 1.285e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

GenotypeDepth
all individuals: 449
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 373
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6113
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.838235294117647e-4
allele num: 16320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

QD
type: SiteQuality
SIO_000300: 1.285e1

DP
type: SiteQuality
SIO_000300: 1.882871e6

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeDepth
all individuals: 83
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 936
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6105
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43125
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

MQ
type: SiteQuality
SIO_000300: 5.652e1

FS
type: SiteQuality
SIO_000300: 1.49e0

MQRankSum
type: SiteQuality
SIO_000300: -1.867e0

QD
type: SiteQuality
SIO_000300: 1.228e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.883556e6

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

GenotypeDepth
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1843
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43125
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6105
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.49e0

MQRankSum
type: SiteQuality
SIO_000300: -1.867e0

MQ
type: SiteQuality
SIO_000300: 5.652e1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-1

DP
type: SiteQuality
SIO_000300: 1.883556e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

QD
type: SiteQuality
SIO_000300: 1.228e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

GenotypeDepth
all individuals: 1538
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5989
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1842
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6104
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1569
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5963
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43159
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502810255177181e-5
allele num: 66542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.489e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 2.832e0

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

MQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.444e0

DP
type: SiteQuality
SIO_000300: 1.884128e6

MQ
type: SiteQuality
SIO_000300: 5.652e1

GenotypeDepth
all individuals: 258
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26459
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1537
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5982
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6105
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

QD
type: SiteQuality
SIO_000300: 1.3e1

DP
type: SiteQuality
SIO_000300: 1.885603e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

FS
type: SiteQuality
SIO_000300: 1.908e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 936
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26461
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5997
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5982
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6105
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43273
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50154659299078e-5
allele num: 66598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-1

DP
type: SiteQuality
SIO_000300: 1.885712e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.662e0

FS
type: SiteQuality
SIO_000300: 1.0394e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.162e1

GenotypeDepth
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1840
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5996
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1539
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6105
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43286
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314814814814815e-4
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.137e1

MQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

FS
type: SiteQuality
SIO_000300: 5.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.886071e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

GenotypeDepth
all individuals: 1538
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 683
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5996
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 188
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6106
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1618
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5981
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43308
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1568
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502881844380403e-5
allele num: 66624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: -6.914e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

DP
type: SiteQuality
SIO_000300: 1.886265e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 1.2215e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

QD
type: SiteQuality
SIO_000300: 1.371e1

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6001
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1840
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 448
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43340
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6104
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 976
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.062e0

FS
type: SiteQuality
SIO_000300: 9.81e-1

QD
type: SiteQuality
SIO_000300: 8.93e0

DP
type: SiteQuality
SIO_000300: 1.886716e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.869e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.926e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.014e0

GenotypeDepth
all individuals: 938
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 449
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1536
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 683
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43344
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6108
bin: 9.75e1
variant carriers: 6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.001170152119776e-5
allele num: 66658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 5.32e-1

DP
type: SiteQuality
SIO_000300: 1.887141e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e-1

QD
type: SiteQuality
SIO_000300: 1.057e1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

GenotypeDepth
all individuals: 1532
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 170
bin: 8.75e1
variant carriers: 3

GenotypeDepth
all individuals: 195
bin: 7.75e1
variant carriers: 7

GenotypeDepth
all individuals: 454
bin: 5.75e1
variant carriers: 8

GenotypeDepth
all individuals: 299
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5992
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 933
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 193
bin: 9.25e1
variant carriers: 6

GenotypeDepth
all individuals: 26426
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 575
bin: 5.25e1
variant carriers: 6

GenotypeDepth
all individuals: 1852
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5981
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6158
bin: 9.75e1
variant carriers: 76

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43312
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.05143721633888e-4
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 69
allele frequency: 1.035227750105023e-3
allele num: 66652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

VQSLOD
type: SiteQuality
SIO_000300: 5.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.521e0

DP
type: SiteQuality
SIO_000300: 1.890563e6

GenotypeDepth
all individuals: 934
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1838
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6010
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1612
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6093
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43352
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000390050706592e-5
allele num: 66658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.605e0

VQSLOD
type: SiteQuality
SIO_000300: -2.924e-1

FS
type: SiteQuality
SIO_000300: 2.489e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

DP
type: SiteQuality
SIO_000300: 1.886259e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

QD
type: SiteQuality
SIO_000300: 1.105e1

GenotypeDepth
all individuals: 374
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 300
bin: 6.75e1
variant carriers: 2

GenotypeDepth
all individuals: 446
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1838
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 935
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5990
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6093
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43365
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.494e0

DP
type: SiteQuality
SIO_000300: 1.88637e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 4.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 8.045e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.63e-1

GenotypeDepth
all individuals: 6001
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 8.25e1
variant carriers: 4

GenotypeDepth
all individuals: 933
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1850
bin: 9.75e1
variant carriers: 15

GenotypeDepth
all individuals: 26419
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 568
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6111
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 43355
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5988
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.200546070989228e-4
allele num: 66658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 4.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

DP
type: SiteQuality
SIO_000300: 1.888101e6

QD
type: SiteQuality
SIO_000300: 1.325e1

GenotypeDepth
all individuals: 447
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 684
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1532
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1836
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6086
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

FS
type: SiteQuality
SIO_000300: 5.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

DP
type: SiteQuality
SIO_000300: 1.886067e6

QD
type: SiteQuality
SIO_000300: 1.278e1

GenotypeDepth
all individuals: 447
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26413
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 936
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6006
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1836
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20445
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6086
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 5.54e-1

DP
type: SiteQuality
SIO_000300: 1.886067e6

QD
type: SiteQuality
SIO_000300: 1.278e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeDepth
all individuals: 20448
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1531
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 935
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 683
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1837
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6084
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43362
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5991
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.7136e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.275e0

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.885989e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

QD
type: SiteQuality
SIO_000300: 1.14e1

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 937
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1838
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 570
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 375
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26388
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 446
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6092
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43347
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5990
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.42600679281902e-4
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729804532087874e-4
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.630701551285019e-4
allele num: 8638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

FS
type: SiteQuality
SIO_000300: 5.45e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 9.109999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

DP
type: SiteQuality
SIO_000300: 1.886388e6

GenotypeDepth
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26380
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20452
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 936
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1837
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43340
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6091
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5989
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.501875468867217e-5
allele num: 66650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.059e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

DP
type: SiteQuality
SIO_000300: 1.885993e6

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.65e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 683
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26360
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 299
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5991
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6085
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.707e1

MQRankSum
type: SiteQuality
SIO_000300: -1.319e0

FS
type: SiteQuality
SIO_000300: 2.812e0

QD
type: SiteQuality
SIO_000300: 1.287e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.262e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e0

DP
type: SiteQuality
SIO_000300: 1.885666e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

GenotypeDepth
all individuals: 703
bin: 4.75e1
variant carriers: 23

GenotypeDepth
all individuals: 287
bin: 7.25e1
variant carriers: 29

GenotypeDepth
all individuals: 26236
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 20406
bin: 2.75e1
variant carriers: 4

GenotypeDepth
all individuals: 1854
bin: 9.75e1
variant carriers: 26

GenotypeDepth
all individuals: 196
bin: 7.75e1
variant carriers: 10

GenotypeDepth
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 6.75e1
variant carriers: 13

GenotypeDepth
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 244
bin: 8.25e1
variant carriers: 12

GenotypeDepth
all individuals: 176
bin: 8.75e1
variant carriers: 10

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43215
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5959
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6305
bin: 9.75e1
variant carriers: 250

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.854307188282906e-4
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.31858407079646e-3
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.326007959854646e-4
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 156
allele frequency: 9.461426491994178e-3
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 84
allele frequency: 1.260315078769693e-3
allele num: 66650
num of homozygotes: 2

QD
type: SiteQuality
SIO_000300: 1.271e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-2

FS
type: SiteQuality
SIO_000300: 1.147e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.45e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

DP
type: SiteQuality
SIO_000300: 1.895189e6

GenotypeDepth
all individuals: 26236
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 590
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 942
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 703
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 469
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1530
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1854
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 244
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6305
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5959
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43215
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.45e-2

QD
type: SiteQuality
SIO_000300: 1.271e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 1.147e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-2

DP
type: SiteQuality
SIO_000300: 1.895189e6

GenotypeDepth
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1521
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 680
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 446
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1829
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6067
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43298
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.929e1

FS
type: SiteQuality
SIO_000300: 3.343e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.366e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

DP
type: SiteQuality
SIO_000300: 1.884203e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.82e-1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

GenotypeDepth
all individuals: 114
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 572
bin: 5.25e1
variant carriers: 3

GenotypeDepth
all individuals: 20538
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 930
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 299
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1830
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 376
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6040
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43277
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6073
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.201092994625109e-4
allele num: 66606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.177e1

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-2

DP
type: SiteQuality
SIO_000300: 1.884428e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.283e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

FS
type: SiteQuality
SIO_000300: 6.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.89e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-3

GenotypeDepth
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 20542
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 928
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 680
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26145
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1829
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6068
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43262
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5986
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.475440222428174e-4
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

DP
type: SiteQuality
SIO_000300: 1.883782e6

QD
type: SiteQuality
SIO_000300: 1.201e1

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.662e0

FS
type: SiteQuality
SIO_000300: 6.749e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeDepth
all individuals: 928
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26031
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6038
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 376
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1829
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6065
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43157
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.076e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.39e-1

DP
type: SiteQuality
SIO_000300: 1.882544e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

FS
type: SiteQuality
SIO_000300: 9.137e0

VQSLOD
type: SiteQuality
SIO_000300: -1.763e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.624e0

GenotypeDepth
all individuals: 929
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25943
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20535
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6033
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1829
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43052
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6065
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.88128e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

FS
type: SiteQuality
SIO_000300: 2.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 1.34e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6035
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1520
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 252
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 930
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 446
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1829
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6064
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42917
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5962
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.396e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.51e0

VQSLOD
type: SiteQuality
SIO_000300: 5.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 1.006e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 1.879989e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

GenotypeDepth
all individuals: 299
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 392
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6032
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 928
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 681
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20524
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6065
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 561
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5961
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42753
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.222643354933366e-4
allele num: 16358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.01e0

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.415e1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 1.878259e6

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 928
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6031
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 352
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20514
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 680
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5952
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42586
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6063
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506069459923492e-5
allele num: 66398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.514e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

DP
type: SiteQuality
SIO_000300: 1.876732e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-2

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20169
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23003
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2249
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1829
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 446
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 507
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 681
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6061
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 511
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39631
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5748
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.172882946281961e-4
allele num: 8526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15966
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.852e0

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.843301e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.052e0

QD
type: SiteQuality
SIO_000300: 1.421e1

GenotypeDepth
all individuals: 299
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1111
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 685
bin: 4.75e1
variant carriers: 5

GenotypeDepth
all individuals: 445
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1523
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 927
bin: 4.25e1
variant carriers: 3

GenotypeDepth
all individuals: 261
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1829
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 376
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36337
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6076
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 554
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.070409134157945e-3
allele num: 8408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.854943424225561e-4
allele num: 64692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.859988168014199e-5
allele num: 10142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15686
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.876264867743653e-5
allele num: 11266
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.716e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.966e0

QD
type: SiteQuality
SIO_000300: 1.385e1

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 1.802361e6

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2061
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1502
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6219
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1828
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 683
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33758
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5606
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6059
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1457
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.336777566835766e-5
allele num: 64262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

DP
type: SiteQuality
SIO_000300: 1.772863e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.008e0

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.282e1

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5477
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 920
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 680
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5913
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1453
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6054
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 551
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558214909000249e-5
allele num: 64176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15566
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.077e1

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 1.7637e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: 6.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.48e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeDepth
all individuals: 2327
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1470
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2478
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17636
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1427
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1789
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30727
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 195
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6059
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 606
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6788
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2410
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63890
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.514963880288958e-4
allele num: 15504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.735077e6

QD
type: SiteQuality
SIO_000300: 1.656e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e-1

MQ
type: SiteQuality
SIO_000300: 6.043e1

FS
type: SiteQuality
SIO_000300: 6.143e0

GenotypeDepth
all individuals: 1828
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14644
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 682
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1451
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15960
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 445
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3623
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2447
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6052
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1231
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4335
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7919
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11056
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.948269001193792e-5
allele num: 10052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.856e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.62e-1

DP
type: SiteQuality
SIO_000300: 1.685971e6

VQSLOD
type: SiteQuality
SIO_000300: -8.408e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.85e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeDepth
all individuals: 2134
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 374
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4320
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 529
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1696
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7085
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3814
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4424
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5892
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1523
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7422
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4091
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 942
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2766
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5798
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.439263097294185e-4
allele num: 6948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48318
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.279286e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

QD
type: SiteQuality
SIO_000300: 1.508e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 1696
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4320
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6951
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 330
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5892
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2766
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7085
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4424
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1523
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4091
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 942
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3814
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7422
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.069622087006912e-5
allele num: 48318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6948
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.279286e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.508e1

GenotypeDepth
all individuals: 7345
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2129
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1696
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 529
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7024
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4087
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10685
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7897
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4422
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5839
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3753
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6932
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.411843876177658e-5
allele num: 11888
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.514e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.733e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.308e0

DP
type: SiteQuality
SIO_000300: 1.281835e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.129e1

GenotypeDepth
all individuals: 155
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4671
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1696
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10196
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 374
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1880
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 848
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6922
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2819
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4378
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5699
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2291
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4084
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 582
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12092
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5806
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.150747986191024e-4
allele num: 8690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12154
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.505e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 1.304838e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.86e1

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1409
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12534
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13555
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1696
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4086
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 12986
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2501
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6453
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4863
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14827
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48946
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7022
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.357206803939123e-4
allele num: 8936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.006e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.97e0

DP
type: SiteQuality
SIO_000300: 1.342584e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

GenotypeDepth
all individuals: 856
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1696
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13999
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 134
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 528
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 374
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15363
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 556
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4006
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4087
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4347
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17085
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.120178643930166e-5
allele num: 49260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12478
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

DP
type: SiteQuality
SIO_000300: 1.35936e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.503e1

GenotypeDepth
all individuals: 12922
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1067
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2019
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 527
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1696
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3853
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4084
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 462
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5670
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1240
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18698
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3818
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2636
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.01450443190975e-5
allele num: 49640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9076
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

FS
type: SiteQuality
SIO_000300: 6.066e0

QD
type: SiteQuality
SIO_000300: 1.167e1

DP
type: SiteQuality
SIO_000300: 1.381305e6

GenotypeDepth
all individuals: 12282
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 2028
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5962
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12116
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 17893
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4092
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1006
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3617
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5382
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3684
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12766
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2719
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 9.839752600506045e-4
allele num: 7114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.00096046102129e-5
allele num: 49976
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.155e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.395106e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

GenotypeDepth
all individuals: 259
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 374
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12082
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1696
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 192
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12849
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19217
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4084
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3540
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5289
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.994893073731248e-5
allele num: 50128
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

DP
type: SiteQuality
SIO_000300: 1.399015e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 1.768e1