11-65307910-CGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307910
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307908
    reference: chr 11
allele count: 1
allele frequency: 1.236246754852269e-5
allele num: 80890
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436032
  ensembl transcript: ENST00000529371
  gene symbol: LTBP3
  hgvsc: ENST00000529371.1:c.-193_-192delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+45_3106+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+45_115+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+45_1984+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+45_*2751+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+45_3106+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+45_2839+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+45_1396+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+45_115+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+45_820+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+45_2057+46delAC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+45_115+46delAC
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: CGT
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

11-65307914-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307914
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307914
    reference: chr 11
allele count: 1
allele frequency: 1.196773498647646e-5
allele num: 83558
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436032
  ensembl transcript: ENST00000529371
  gene symbol: LTBP3
  hgvsc: ENST00000529371.1:c.-195A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+43A>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+43A>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8531
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

11-65307924-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307924
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307924
    reference: chr 11
allele count: 1
allele frequency: 1.093254619000765e-5
allele num: 91470
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+33C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+33C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7277
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

11-65307928-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307928
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307928
    reference: chr 11
allele count: 1
allele frequency: 1.058940635787958e-5
allele num: 94434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+29G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26950
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/11-65307931-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307931
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307931
    reference: chr 11
allele count: 1
allele frequency: 1.036656161884226e-5
allele num: 96464
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+26G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+26G>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

11-65307931-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307931
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307931
    reference: chr 11
allele count: 1
allele frequency: 1.036656161884226e-5
allele num: 96464
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+26G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+26G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

11-65307940-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307940
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307941
    reference: chr 11
allele count: 8
allele frequency: 7.827788649706458e-5
allele num: 102200
alternate allele: CG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+16dupC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+16dupC
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30231
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10449
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ

11-65307940-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307940
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307940
    reference: chr 11
allele count: 3
allele frequency: 2.935420743639922e-5
allele num: 102200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+17G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+17G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10449
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

11-65307943-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307943
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307943
    reference: chr 11
allele count: 3
allele frequency: 2.845381945103098e-5
allele num: 105434
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+14C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+14C>G
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31268
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5453
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

11-65307943-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307943
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307943
    reference: chr 11
allele count: 523
allele frequency: 4.960449190963067e-3
allele num: 105434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+14C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+14C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11019
  bin: 2.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 1.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 3.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 31268
  bin: 2.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 1.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 3
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ

11-65307948-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307948
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307948
    reference: chr 11
allele count: 1
allele frequency: 9.262689885142645e-6
allele num: 107960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2839+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.820+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1396+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2751+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.115+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.115+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1984+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3106+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3106+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2057+9C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.115+9C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

11-65307960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307960
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307960
    reference: chr 11
allele count: 6
allele frequency: 5.280202759785975e-5
allele num: 113632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3103G>A
  hgvsp: ENSP00000326647.4:p.Val1035Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3103G>A
  hgvsp: ENSP00000301873.5:p.Val1035Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2054G>A
  hgvsp: ENSP00000431219.1:p.Val686Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1981G>A
  hgvsp: ENSP00000441912.1:p.Val661Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2836G>A
  hgvsp: ENSP00000435276.1:p.Val946Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.112G>A
  hgvsp: ENSP00000434315.1:p.Val38Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.112G>A
  hgvsp: ENSP00000436341.1:p.Val38Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2748G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1393G>A
  hgvsp: ENSP00000435530.1:p.Val465Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.112G>A
  hgvsp: ENSP00000434406.1:p.Val38Met
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.817G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13147
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val1035Met
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

11-65307967-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307967
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307967
    reference: chr 11
allele count: 2
allele frequency: 1.728578589825586e-5
allele num: 115702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.810G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2829G>A
  hgvsp: ENST00000530866.1:c.2829G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1386G>A
  hgvsp: ENST00000532932.1:c.1386G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3096G>A
  hgvsp: ENST00000322147.4:c.3096G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.105G>A
  hgvsp: ENST00000532661.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.105G>A
  hgvsp: ENST00000529189.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2741G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2047G>A
  hgvsp: ENST00000526927.1:c.2047G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3096G>A
  hgvsp: ENST00000301873.5:c.3096G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.105G>A
  hgvsp: ENST00000530785.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1974G>A
  hgvsp: ENST00000536982.1:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36443
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu1032Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

11-65307973-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307973
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307973
    reference: chr 11
allele count: 2
allele frequency: 1.706309934136436e-5
allele num: 117212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.99C>T
  hgvsp: ENST00000532661.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.99C>T
  hgvsp: ENST00000530785.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3090C>T
  hgvsp: ENST00000301873.5:c.3090C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.99C>T
  hgvsp: ENST00000529189.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3090C>T
  hgvsp: ENST00000322147.4:c.3090C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2823C>T
  hgvsp: ENST00000530866.1:c.2823C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1968C>T
  hgvsp: ENST00000536982.1:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1380C>T
  hgvsp: ENST00000532932.1:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2735C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2041C>T
  hgvsp: ENST00000526927.1:c.2041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.804C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn1030Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

11-65307982-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307982
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307982
    reference: chr 11
allele count: 1
allele frequency: 8.444376889429329e-6
allele num: 118422
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3081C>T
  hgvsp: ENST00000301873.5:c.3081C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.795C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1959C>T
  hgvsp: ENST00000536982.1:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1371C>T
  hgvsp: ENST00000532932.1:c.1371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3081C>T
  hgvsp: ENST00000322147.4:c.3081C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.90C>T
  hgvsp: ENST00000532661.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.90C>T
  hgvsp: ENST00000530785.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2726C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2814C>T
  hgvsp: ENST00000530866.1:c.2814C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.90C>T
  hgvsp: ENST00000529189.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2032C>T
  hgvsp: ENST00000526927.1:c.2032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr1027Tyr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

11-65307986-TAGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307986
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307983
    reference: chr 11
allele count: 1
allele frequency: 8.420059950826851e-6
allele num: 118764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.83_85delTCT
  hgvsp: ENSP00000434406.1:p.Phe28del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.83_85delTCT
  hgvsp: ENSP00000436341.1:p.Phe28del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1952_1954delTCT
  hgvsp: ENSP00000441912.1:p.Phe651del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2807_2809delTCT
  hgvsp: ENSP00000435276.1:p.Phe936del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2025_2027delTCT
  hgvsp: ENSP00000431219.1:p.Phe676del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3074_3076delTCT
  hgvsp: ENSP00000301873.5:p.Phe1025del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1364_1366delTCT
  hgvsp: ENSP00000435530.1:p.Phe455del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2719_*2721delTCT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.83_85delTCT
  hgvsp: ENSP00000434315.1:p.Phe28del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3074_3076delTCT
  hgvsp: ENSP00000326647.4:p.Phe1025del
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.788_790delTCT
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe1025del
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: TAGA
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

11-65307994-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307994
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307994
    reference: chr 11
allele count: 2
allele frequency: 1.678274733573886e-5
allele num: 119170
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3069G>A
  hgvsp: ENST00000301873.5:c.3069G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1947G>A
  hgvsp: ENST00000536982.1:c.1947G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1359G>A
  hgvsp: ENST00000532932.1:c.1359G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2714G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.78G>A
  hgvsp: ENST00000530785.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.78G>A
  hgvsp: ENST00000532661.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.783G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.78G>A
  hgvsp: ENST00000529189.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3069G>A
  hgvsp: ENST00000322147.4:c.3069G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2802G>A
  hgvsp: ENST00000530866.1:c.2802G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2020G>A
  hgvsp: ENST00000526927.1:c.2020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37382
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln1023Gln
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-65307995-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307995
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307995
    reference: chr 11
allele count: 3
allele frequency: 2.516567402063585e-5
allele num: 119210
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3068A>G
  hgvsp: ENSP00000301873.5:p.Gln1023Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2019A>G
  hgvsp: ENSP00000431219.1:p.Gln674Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2801A>G
  hgvsp: ENSP00000435276.1:p.Gln934Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3068A>G
  hgvsp: ENSP00000326647.4:p.Gln1023Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.77A>G
  hgvsp: ENSP00000436341.1:p.Gln26Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1946A>G
  hgvsp: ENSP00000441912.1:p.Gln649Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2713A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.77A>G
  hgvsp: ENSP00000434315.1:p.Gln26Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.782A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1358A>G
  hgvsp: ENSP00000435530.1:p.Gln453Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.77A>G
  hgvsp: ENSP00000434406.1:p.Gln26Arg
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln1023Arg
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-65307997-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65307997
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65307997
    reference: chr 11
allele count: 1
allele frequency: 8.382510729613734e-6
allele num: 119296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1944G>A
  hgvsp: ENST00000536982.1:c.1944G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.75G>A
  hgvsp: ENST00000530785.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.75G>A
  hgvsp: ENST00000532661.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2711G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.75G>A
  hgvsp: ENST00000529189.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2017G>A
  hgvsp: ENST00000526927.1:c.2017G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2799G>A
  hgvsp: ENST00000530866.1:c.2799G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.780G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3066G>A
  hgvsp: ENST00000322147.4:c.3066G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3066G>A
  hgvsp: ENST00000301873.5:c.3066G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1356G>A
  hgvsp: ENST00000532932.1:c.1356G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys1022Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

11-65308002-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308002
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308002
    reference: chr 11
allele count: 1
allele frequency: 8.373105584861425e-6
allele num: 119430
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1351T>C
  hgvsp: ENSP00000435530.1:p.Cys451Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1939T>C
  hgvsp: ENSP00000441912.1:p.Cys647Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2794T>C
  hgvsp: ENSP00000435276.1:p.Cys932Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.70T>C
  hgvsp: ENSP00000434315.1:p.Cys24Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3061T>C
  hgvsp: ENSP00000301873.5:p.Cys1021Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.775T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.2012T>C
  hgvsp: ENSP00000431219.1:p.Cys672Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.70T>C
  hgvsp: ENSP00000434406.1:p.Cys24Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2706T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.70T>C
  hgvsp: ENSP00000436341.1:p.Cys24Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3061T>C
  hgvsp: ENSP00000326647.4:p.Cys1021Arg
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys1021Arg
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum

11-65308021-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308021
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308021
    reference: chr 11
allele count: 1
allele frequency: 8.351009637065121e-6
allele num: 119746
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1920G>C
  hgvsp: ENSP00000441912.1:p.Gln640His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1993G>C
  hgvsp: ENSP00000431219.1:p.Gln665His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3042G>C
  hgvsp: ENSP00000301873.5:p.Gln1014His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.51G>C
  hgvsp: ENSP00000434406.1:p.Gln17His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.756G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3042G>C
  hgvsp: ENSP00000326647.4:p.Gln1014His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.51G>C
  hgvsp: ENSP00000434315.1:p.Gln17His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1332G>C
  hgvsp: ENSP00000435530.1:p.Gln444His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2687G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2775G>C
  hgvsp: ENSP00000435276.1:p.Gln925His
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.51G>C
  hgvsp: ENSP00000436341.1:p.Gln17His
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln1014His
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-65308024-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308024
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308024
    reference: chr 11
allele count: 1
allele frequency: 8.350591221858508e-6
allele num: 119752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1917G>T
  hgvsp: ENST00000536982.1:c.1917G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2772G>T
  hgvsp: ENST00000530866.1:c.2772G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1329G>T
  hgvsp: ENST00000532932.1:c.1329G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.48G>T
  hgvsp: ENST00000529189.1:c.48G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2684G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3039G>T
  hgvsp: ENST00000301873.5:c.3039G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.753G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3039G>T
  hgvsp: ENST00000322147.4:c.3039G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.48G>T
  hgvsp: ENST00000532661.1:c.48G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.48G>T
  hgvsp: ENST00000530785.1:c.48G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1990G>T
  hgvsp: ENST00000526927.1:c.1990G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr1013Thr
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

11-65308027-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308027
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308027
    reference: chr 11
allele count: 2
allele frequency: 1.669755714738934e-5
allele num: 119778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2769C>T
  hgvsp: ENST00000530866.1:c.2769C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1326C>T
  hgvsp: ENST00000532932.1:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.45C>T
  hgvsp: ENST00000530785.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1914C>T
  hgvsp: ENST00000536982.1:c.1914C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.45C>T
  hgvsp: ENST00000532661.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2681C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3036C>T
  hgvsp: ENST00000322147.4:c.3036C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3036C>T
  hgvsp: ENST00000301873.5:c.3036C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1987C>T
  hgvsp: ENST00000526927.1:c.1987C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.750C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.45C>T
  hgvsp: ENST00000529189.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn1012Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

11-65308040-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308040
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308040
    reference: chr 11
allele count: 1
allele frequency: 8.350033400133601e-6
allele num: 119760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3023G>A
  hgvsp: ENSP00000326647.4:p.Gly1008Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2668G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2756G>A
  hgvsp: ENSP00000435276.1:p.Gly919Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1901G>A
  hgvsp: ENSP00000441912.1:p.Gly634Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.32G>A
  hgvsp: ENSP00000434406.1:p.Gly11Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3023G>A
  hgvsp: ENSP00000301873.5:p.Gly1008Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1974G>A
  hgvsp: ENSP00000431219.1:p.Gly659Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1313G>A
  hgvsp: ENSP00000435530.1:p.Gly438Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.32G>A
  hgvsp: ENSP00000436341.1:p.Gly11Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.32G>A
  hgvsp: ENSP00000434315.1:p.Gly11Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.737G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly1008Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

11-65308041-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308041
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308041
    reference: chr 11
allele count: 1
allele frequency: 8.350591221858508e-6
allele num: 119752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2667G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3022G>A
  hgvsp: ENSP00000301873.5:p.Gly1008Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.736G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1900G>A
  hgvsp: ENSP00000441912.1:p.Gly634Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.31G>A
  hgvsp: ENSP00000434315.1:p.Gly11Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2755G>A
  hgvsp: ENSP00000435276.1:p.Gly919Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3022G>A
  hgvsp: ENSP00000326647.4:p.Gly1008Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1312G>A
  hgvsp: ENSP00000435530.1:p.Gly438Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.31G>A
  hgvsp: ENSP00000434406.1:p.Gly11Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.31G>A
  hgvsp: ENSP00000436341.1:p.Gly11Ser
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1973G>A
  hgvsp: ENSP00000431219.1:p.Gly659Ser
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly1008Ser
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

11-65308042-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308042
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308042
    reference: chr 11
allele count: 1
allele frequency: 8.351986102295126e-6
allele num: 119732
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1311G>C
  hgvsp: ENSP00000435530.1:p.Glu437Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.735G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2754G>C
  hgvsp: ENSP00000435276.1:p.Glu918Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3021G>C
  hgvsp: ENSP00000301873.5:p.Glu1007Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.30G>C
  hgvsp: ENSP00000434406.1:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3021G>C
  hgvsp: ENSP00000326647.4:p.Glu1007Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.30G>C
  hgvsp: ENSP00000434315.1:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1899G>C
  hgvsp: ENSP00000441912.1:p.Glu633Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.30G>C
  hgvsp: ENSP00000436341.1:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1972G>C
  hgvsp: ENSP00000431219.1:p.Glu658Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2666G>C
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1007Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-65308051-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308051
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308051
    reference: chr 11
allele count: 476
allele frequency: 3.978402955385053e-3
allele num: 119646
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1302T>C
  hgvsp: ENST00000532932.1:c.1302T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.21T>C
  hgvsp: ENST00000529189.1:c.21T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2657T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3012T>C
  hgvsp: ENST00000322147.4:c.3012T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2745T>C
  hgvsp: ENST00000530866.1:c.2745T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.726T>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.21T>C
  hgvsp: ENST00000532661.1:c.21T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1890T>C
  hgvsp: ENST00000536982.1:c.1890T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.21T>C
  hgvsp: ENST00000530785.1:c.21T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3012T>C
  hgvsp: ENST00000301873.5:c.3012T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1963T>C
  hgvsp: ENST00000526927.1:c.1963T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 36902
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 14947
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
hgvs: p.Ile1004Ile
num of homozygotes: 10
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

11-65308054-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308054
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308054
    reference: chr 11
allele count: 1
allele frequency: 8.359246999030327e-6
allele num: 119628
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1299G>C
  hgvsp: ENSP00000435530.1:p.Glu433Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1960G>C
  hgvsp: ENSP00000431219.1:p.Glu654Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1887G>C
  hgvsp: ENSP00000441912.1:p.Glu629Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2654G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3009G>C
  hgvsp: ENSP00000326647.4:p.Glu1003Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3009G>C
  hgvsp: ENSP00000301873.5:p.Glu1003Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2742G>C
  hgvsp: ENSP00000435276.1:p.Glu914Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.18G>C
  hgvsp: ENSP00000434406.1:p.Glu6Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.18G>C
  hgvsp: ENSP00000434315.1:p.Glu6Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.18G>C
  hgvsp: ENSP00000436341.1:p.Glu6Asp
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.723G>C
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1003Asp
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

11-65308054-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308054
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308054
    reference: chr 11
allele count: 15
allele frequency: 1.253887049854549e-4
allele num: 119628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.723G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2742G>A
  hgvsp: ENST00000530866.1:c.2742G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1887G>A
  hgvsp: ENST00000536982.1:c.1887G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.18G>A
  hgvsp: ENST00000530785.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1960G>A
  hgvsp: ENST00000526927.1:c.1960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.18G>A
  hgvsp: ENST00000529189.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3009G>A
  hgvsp: ENST00000322147.4:c.3009G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1299G>A
  hgvsp: ENST00000532932.1:c.1299G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3009G>A
  hgvsp: ENST00000301873.5:c.3009G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2654G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.18G>A
  hgvsp: ENST00000532661.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 14957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1003Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

11-65308062-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308062
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308062
    reference: chr 11
allele count: 1
allele frequency: 8.365260745177427e-6
allele num: 119542
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.10G>C
  hgvsp: ENSP00000434406.1:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2734G>C
  hgvsp: ENSP00000435276.1:p.Gly912Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1879G>C
  hgvsp: ENSP00000441912.1:p.Gly627Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3001G>C
  hgvsp: ENSP00000301873.5:p.Gly1001Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1952G>C
  hgvsp: ENSP00000431219.1:p.Gly652Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1291G>C
  hgvsp: ENSP00000435530.1:p.Gly431Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3001G>C
  hgvsp: ENSP00000326647.4:p.Gly1001Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.10G>C
  hgvsp: ENSP00000436341.1:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.10G>C
  hgvsp: ENSP00000434315.1:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.715G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2646G>C
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly1001Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-65308063-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308063
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308063
    reference: chr 11
allele count: 1
allele frequency: 8.367220576668843e-6
allele num: 119514
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1290C>T
  hgvsp: ENST00000532932.1:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.9C>T
  hgvsp: ENST00000529189.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2733C>T
  hgvsp: ENST00000530866.1:c.2733C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.9C>T
  hgvsp: ENST00000532661.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.9C>T
  hgvsp: ENST00000530785.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.714C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2645C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.3000C>T
  hgvsp: ENST00000322147.4:c.3000C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1951C>T
  hgvsp: ENST00000526927.1:c.1951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.3000C>T
  hgvsp: ENST00000301873.5:c.3000C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1878C>T
  hgvsp: ENST00000536982.1:c.1878C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe1000Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

11-65308071-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308071
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308071
    reference: chr 11
allele count: 1
allele frequency: 8.375209380234507e-6
allele num: 119400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1282A>G
  hgvsp: ENSP00000435530.1:p.Met428Val
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1943A>G
  hgvsp: ENSP00000431219.1:p.Met649Val
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.1A>G
  hgvsp: ENSP00000434406.1:p.Met1?
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2992A>G
  hgvsp: ENSP00000301873.5:p.Met998Val
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.1A>G
  hgvsp: ENSP00000436341.1:p.Met1?
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2992A>G
  hgvsp: ENSP00000326647.4:p.Met998Val
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2725A>G
  hgvsp: ENSP00000435276.1:p.Met909Val
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2637A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.706A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.1A>G
  hgvsp: ENSP00000434315.1:p.Met1?
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1870A>G
  hgvsp: ENSP00000441912.1:p.Met624Val
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

11-65308077-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308077
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308077
    reference: chr 11
allele count: 1
allele frequency: 8.38321345338095e-6
allele num: 119286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2986G>C
  hgvsp: ENSP00000326647.4:p.Glu996Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-6G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2631G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1276G>C
  hgvsp: ENSP00000435530.1:p.Glu426Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2719G>C
  hgvsp: ENSP00000435276.1:p.Glu907Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1937G>C
  hgvsp: ENSP00000431219.1:p.Glu647Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2986G>C
  hgvsp: ENSP00000301873.5:p.Glu996Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1864G>C
  hgvsp: ENSP00000441912.1:p.Glu622Gln
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.700G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-6G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-6G>C
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu996Gln
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

11-65308077-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308077
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308077
    reference: chr 11
allele count: 2
allele frequency: 1.67664269067619e-5
allele num: 119286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2631G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1937G>A
  hgvsp: ENSP00000431219.1:p.Glu647Lys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2986G>A
  hgvsp: ENSP00000301873.5:p.Glu996Lys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2719G>A
  hgvsp: ENSP00000435276.1:p.Glu907Lys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1864G>A
  hgvsp: ENSP00000441912.1:p.Glu622Lys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1276G>A
  hgvsp: ENSP00000435530.1:p.Glu426Lys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2986G>A
  hgvsp: ENSP00000326647.4:p.Glu996Lys
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.700G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36458
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu996Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS

11-65308078-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308078
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308078
    reference: chr 11
allele count: 1
allele frequency: 8.386869517084054e-6
allele num: 119234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2985C>T
  hgvsp: ENST00000322147.4:c.2985C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2718C>T
  hgvsp: ENST00000530866.1:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1936C>T
  hgvsp: ENST00000526927.1:c.1936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.699C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2630C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2985C>T
  hgvsp: ENST00000301873.5:c.2985C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1275C>T
  hgvsp: ENST00000532932.1:c.1275C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1863C>T
  hgvsp: ENST00000536982.1:c.1863C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14851
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp995Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

11-65308080-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308080
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308080
    reference: chr 11
allele count: 20
allele frequency: 1.677796047112513e-4
allele num: 119204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2628G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1934G>A
  hgvsp: ENSP00000431219.1:p.Asp646Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.697G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2983G>A
  hgvsp: ENSP00000326647.4:p.Asp995Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2983G>A
  hgvsp: ENSP00000301873.5:p.Asp995Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2716G>A
  hgvsp: ENSP00000435276.1:p.Asp906Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1273G>A
  hgvsp: ENSP00000435530.1:p.Asp425Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1861G>A
  hgvsp: ENSP00000441912.1:p.Asp621Asn
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp995Asn
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

11-65308089-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308089
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308088
    reference: chr 11
allele count: 1
allele frequency: 8.403361344537815e-6
allele num: 119000
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-19delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-5delC
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-5delC
  variant of: http://identifiers.org/hgnc/6716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2978-5delC
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: CG
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

11-65308094-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308094
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308094
    reference: chr 11
allele count: 1
allele frequency: 8.41864224137931e-6
allele num: 118784
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-23A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-9A>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-9A>G
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2383
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

11-65308095-GACAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308095
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308091
    reference: chr 11
allele count: 2
allele frequency: 1.683671751355356e-5
allele num: 118788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-14_1268-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-14_-14-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-28_-25delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-14_2978-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-14_*2623-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-14_2711-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-14_1929-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-14_-14-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-14_1856-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-14_2978-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-14_692-11delTTGT
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: GACAA
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

11-65308097-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308097
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308097
    reference: chr 11
allele count: 1
allele frequency: 8.424174009738345e-6
allele num: 118706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-26G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-12G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-12G>C
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-65308101-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308101
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308101
    reference: chr 11
allele count: 1
allele frequency: 8.435117079425063e-6
allele num: 118552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-30G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-16G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-16G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/11-65308102-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308102
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308102
    reference: chr 11
allele count: 4
allele frequency: 3.376724239814956e-5
allele num: 118458
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-31T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-17T>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-17T>G
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/11-65308103-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308103
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308103
    reference: chr 11
allele count: 10
allele frequency: 8.453799983092401e-5
allele num: 118290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-18G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-18G>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

11-65308105-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308105
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308105
    reference: chr 11
allele count: 2
allele frequency: 1.69061707523246e-5
allele num: 118300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-20C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-20C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35246
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

11-65308108-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308108
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308108
    reference: chr 11
allele count: 1
allele frequency: 8.461382251404589e-6
allele num: 118184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-37G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-23G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-23G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

11-65308110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308110
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308110
    reference: chr 11
allele count: 2
allele frequency: 1.694398319156867e-5
allele num: 118036
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-39G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-25G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-25G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

11-65308111-TCCGGTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308111
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308105
    reference: chr 11
allele count: 1
allele frequency: 8.474576271186441e-6
allele num: 118000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-32_*2623-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-32_692-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-32_2978-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-32_1856-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-32_-14-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-32_-14-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-32_1929-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-46_-41delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-32_2711-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-32_1268-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-32_2978-27delGACCGG
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: TCCGGTC
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-65308113-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308113
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308113
    reference: chr 11
allele count: 14
allele frequency: 1.187084520417854e-4
allele num: 117936
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-42G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-28G>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-28G>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14301
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35063
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7315
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-65308113-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308113
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308113
    reference: chr 11
allele count: 1
allele frequency: 8.479175145841813e-6
allele num: 117936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-42G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-28G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-28G>C
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

11-65308113-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308113
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308113
    reference: chr 11
allele count: 2
allele frequency: 1.695835029168363e-5
allele num: 117936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-42G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-28G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

11-65308114-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308114
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308114
    reference: chr 11
allele count: 23
allele frequency: 1.950905050299422e-4
allele num: 117894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-43C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-29C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-29C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35042
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 9.75e1
  variant carriers: 23
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-65308116-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308116
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308115
    reference: chr 11
allele count: 1
allele frequency: 8.486658972095866e-6
allele num: 117832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-46delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-32delG
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-32delG
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: TC
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

11-65308117-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308117
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308117
    reference: chr 11
allele count: 1
allele frequency: 8.489973341483707e-6
allele num: 117786
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-46G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-32G>C
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-32G>C
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

11-65308119-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308119
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308119
    reference: chr 11
allele count: 1
allele frequency: 8.493434575073469e-6
allele num: 117738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-48G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-34G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

11-65308120-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308120
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308120
    reference: chr 11
allele count: 2
allele frequency: 1.700304354479452e-5
allele num: 117626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-49C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-35C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-35C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-65308133-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308133
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308133
    reference: chr 11
allele count: 4
allele frequency: 3.419738731960878e-5
allele num: 116968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-62C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-48C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-48C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

11-65308134-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308134
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308134
    reference: chr 11
allele count: 1
allele frequency: 8.548177528550913e-6
allele num: 116984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.692-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2623-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2978-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1268-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1929-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2978-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2711-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1856-49C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000436341
  ensembl transcript: ENST00000532661
  gene symbol: LTBP3
  hgvsc: ENST00000532661.1:c.-63C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-14-49C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-65308297-C-CCGGGGTGAGAGGGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308297
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308312
    reference: chr 11
allele count: 2
allele frequency: 2.805206463195691e-5
allele num: 71296
alternate allele: CCGGGGTGAGAGGGCG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3819
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6813
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

11-65308299-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308299
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308299
    reference: chr 11
allele count: 2
allele frequency: 2.805521265851195e-5
allele num: 71288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.316C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+43C>G
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+43C>G
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-65308301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308301
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308301
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 71850
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.314C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+41C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+41C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18652
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2234
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

11-65308304-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308304
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308304
    reference: chr 11
allele count: 2
allele frequency: 2.743559494087629e-5
allele num: 72898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.311C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+38C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+38C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14635
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4863
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

11-65308304-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308304
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308304
    reference: chr 11
allele count: 1
allele frequency: 1.371779747043815e-5
allele num: 72898
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.311C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+38C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+38C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

11-65308310-G-GCGCGGGGCGGGCGGAGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308310
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308327
    reference: chr 11
allele count: 2
allele frequency: 2.710688243745087e-5
allele num: 73782
alternate allele: GCGCGGGGCGGGCGGAGC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 7103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14274
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18157
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

11-65308313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308313
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308313
    reference: chr 11
allele count: 1
allele frequency: 1.35762578402889e-5
allele num: 73658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.302G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+29G>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+29G>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6499
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

11-65308314-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308314
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308314
    reference: chr 11
allele count: 1
allele frequency: 1.342966882436679e-5
allele num: 74462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.301C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+28C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+28C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5581
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

11-65308314-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308314
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308314
    reference: chr 11
allele count: 3
allele frequency: 4.028900647310038e-5
allele num: 74462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.301C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+28C>A
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+28C>A
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18646
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14040
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

11-65308316-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308316
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308316
    reference: chr 11
allele count: 2
allele frequency: 2.652942112803099e-5
allele num: 75388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.299C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+26C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+26C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18640
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

11-65308317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65308317
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65308317
    reference: chr 11
allele count: 1
allele frequency: 1.321597547114953e-5
allele num: 75666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435276
  ensembl transcript: ENST00000530866
  gene symbol: LTBP3
  hgvsc: ENST00000530866.1:c.2710+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000526124
  gene symbol: LTBP3
  hgvsc: ENST00000526124.1:n.298C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000301873
  ensembl transcript: ENST00000301873
  gene symbol: LTBP3
  hgvsc: ENST00000301873.5:c.2977+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434315
  ensembl transcript: ENST00000530785
  gene symbol: LTBP3
  hgvsc: ENST00000530785.1:c.-15+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000435530
  ensembl transcript: ENST00000532932
  gene symbol: LTBP3
  hgvsc: ENST00000532932.1:c.1267+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000441912
  ensembl transcript: ENST00000536982
  gene symbol: LTBP3
  hgvsc: ENST00000536982.1:c.1855+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000434406
  ensembl transcript: ENST00000529189
  gene symbol: LTBP3
  hgvsc: ENST00000529189.1:c.-15+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000326647
  ensembl transcript: ENST00000322147
  gene symbol: LTBP3
  hgvsc: ENST00000322147.4:c.2977+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000432350
  ensembl transcript: ENST00000528516
  gene symbol: LTBP3
  hgvsc: ENST00000528516.1:c.*2622+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl protein: ENSP00000431219
  ensembl transcript: ENST00000526927
  gene symbol: LTBP3
  hgvsc: ENST00000526927.1:c.1928+25C>T
  variant of: http://identifiers.org/hgnc/6716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168056
  ensembl transcript: ENST00000529582
  gene symbol: LTBP3
  hgvsc: ENST00000529582.1:n.691+25C>T
  variant of: http://identifiers.org/hgnc/6716
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13728
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 26
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2928
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19623
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3222
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2284
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19924
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2869
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44760
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.552795031055901e-4
allele num: 6440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 5.757e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

DP
type: SiteQuality
SIO_000300: 9.73268e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.953e1

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3175
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19013
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1634
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2878
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.165627165627166e-5
allele num: 46176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.06e-1

FS
type: SiteQuality
SIO_000300: 8.616e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.254e1

DP
type: SiteQuality
SIO_000300: 9.96761e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.625e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2657
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25067
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 627
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15514
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7678
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.863417982155113e-5
allele num: 14570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4082
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.09159e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 2.463e0

VQSLOD
type: SiteQuality
SIO_000300: -1.915e0

MQ
type: SiteQuality
SIO_000300: 5.787e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

QD
type: SiteQuality
SIO_000300: 8.050000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
all individuals: 27420
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4063
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2385
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2225
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 975
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14794
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.219809709685289e-4
allele num: 8198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.083e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

DP
type: SiteQuality
SIO_000300: 1.125996e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.133e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.903e-1

QD
type: SiteQuality
SIO_000300: 1.49e1

GenotypeQuality
all individuals: 1425
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2232
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1529
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4314
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28675
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.706908115358819e-5
allele num: 14910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7194
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.131e1

ClippingRankSum
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SIO_000300: -9.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

BaseQRankSum
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SIO_000300: -1.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

DP
type: SiteQuality
SIO_000300: 1.150881e6

MQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

FS
type: SiteQuality
SIO_000300: 2.621e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.77e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53090
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.170686022008897e-4
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7194
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.150881e6

BaseQRankSum
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SIO_000300: -1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.77e-1

FS
type: SiteQuality
SIO_000300: 2.621e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

QD
type: SiteQuality
SIO_000300: 1.131e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.25e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1722
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variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 3.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.919970028900702e-5
allele num: 56054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5052
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7556
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.48015873015873e-4
allele num: 8064
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.377410468319559e-3
allele num: 726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

FS
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.233486e6

QD
type: SiteQuality
SIO_000300: 1.8e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 891
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 241
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 889
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variant carriers: 0

GenotypeQuality
all individuals: 5016
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56054
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.970354685018528e-4
allele num: 7556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 7.42e-1

DP
type: SiteQuality
SIO_000300: 1.233486e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

QD
type: SiteQuality
SIO_000300: 1.8e0

GenotypeQuality
all individuals: 959
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
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GenotypeQuality
all individuals: 77
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GenotypeQuality
all individuals: 496
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GenotypeQuality
all individuals: 32957
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variant carriers: 0

GenotypeQuality
all individuals: 1504
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variant carriers: 0

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1273
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GenotypeQuality
all individuals: 8598
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variant carriers: 0

GenotypeQuality
all individuals: 800
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
all individuals: 1901
bin: 7.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2056
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GenotypeQuality
all individuals: 379
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.728907330567082e-5
allele num: 57840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7766
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.288161793121216e-4
allele num: 15526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5264
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.826e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

VQSLOD
type: SiteQuality
SIO_000300: 5.46e0

DP
type: SiteQuality
SIO_000300: 1.269645e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 2

GenotypeQuality
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bin: 8.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 800
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variant carriers: 508

GenotypeQuality
all individuals: 369
bin: 8.75e1
variant carriers: 4

Other
type: Population
allele count: 3
allele frequency: 3.978779840848806e-3
allele num: 754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 480
allele frequency: 8.298755186721992e-3
allele num: 57840
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 29
allele frequency: 5.509118541033435e-3
allele num: 5264
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15526
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.912961210974456e-4
allele num: 8456
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 6.105006105006105e-4
allele num: 9828
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.46e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.826e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

DP
type: SiteQuality
SIO_000300: 1.269645e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.198e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.688447641238645e-5
allele num: 59226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

BaseQRankSum
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SIO_000300: -7.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.302742e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.097e0

GenotypeDepth
all individuals: 3
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37795
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 523
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variant carriers: 6

GenotypeQuality
all individuals: 54
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GenotypeQuality
all individuals: 534
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GenotypeQuality
all individuals: 488
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16026
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.606596646397642e-4
allele num: 10854
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.190476190476191e-3
allele num: 840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.911e1

MQRankSum
type: SiteQuality
SIO_000300: -5.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.685e0

DP
type: SiteQuality
SIO_000300: 1.37982e6

QD
type: SiteQuality
SIO_000300: 1.249e1

FS
type: SiteQuality
SIO_000300: 5.778e0

VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

Latino
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allele frequency: 9.028530155290719e-5
allele num: 11076
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.577585662901496e-5
allele num: 63388
num of homozygotes: 0

MQ
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SIO_000300: 6.0e1

DP
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BaseQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

FS
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MQRankSum
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SIO_000300: -5.85e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.557583875891717e-5
allele num: 64202
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.143260842855388e-5
allele num: 16278
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -1.263e0

DP
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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SIO_000300: -1.232e0

MQ
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SIO_000300: 5.956e1

QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.542305438168975e-5
allele num: 64838
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Latino
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MQRankSum
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SIO_000300: 7.03e-1

BaseQRankSum
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.097560975609756e-5
allele num: 16400
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65022
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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East Asian
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Other
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QD
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SIO_000300: 1.597e1

VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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SIO_000300: 3.12e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.990842126219391e-4
allele num: 10046
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Finnish)
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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MQ
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MQRankSum
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FS
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.826817683595177e-4
allele num: 16422
num of homozygotes: 0

Other
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African
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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FS
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MQ
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VQSLOD
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.530737203036983e-5
allele num: 65328
num of homozygotes: 0

African
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Other
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South Asian
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Latino
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East Asian
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European (Finnish)
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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QD
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MQ
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DP
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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FS
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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DP
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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Other
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East Asian
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South Asian
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African
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European (Finnish)
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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Other
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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ReadPosRankSum
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DP
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MQ
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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MQRankSum
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DP
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MQ
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VQSLOD
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ReadPosRankSum
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FS
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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East Asian
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African
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European (Non-Finnish)
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DP
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QD
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FS
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VQSLOD
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GenotypeQuality
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Latino
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allele frequency: 2.088772845953003e-3
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
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allele count: 13
allele frequency: 1.984066420438936e-4
allele num: 65522
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 437
allele frequency: 4.313067508882748e-2
allele num: 10132
num of homozygotes: 10

Other
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allele frequency: 1.121076233183856e-3
allele num: 892
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South Asian
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MQ
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SIO_000300: 5.872e1

VQSLOD
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BaseQRankSum
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FS
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QD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 3.05e-2

DP
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SIO_000300: 1.50865e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65514
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Other
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South Asian
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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FS
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MQ
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 3.040992579978105e-4
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.37375217510761e-4
allele num: 65514
num of homozygotes: 0

Latino
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East Asian
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Other
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African
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BaseQRankSum
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ClippingRankSum
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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SIO_000300: 5.56e-1

DP
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SIO_000300: 1.491286e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2854
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.527930570834861e-5
allele num: 65448
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VQSLOD
type: SiteQuality
SIO_000300: -4.055e-1

FS
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BaseQRankSum
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QD
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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SIO_000300: 1.11e0

ReadPosRankSum
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SIO_000300: 1.19e0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8552
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African
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allele frequency: 0.0e0
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Latino
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South Asian
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European (Non-Finnish)
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allele num: 65432
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Other
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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VQSLOD
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MQ
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
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East Asian
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Other
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Latino
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

Other
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African
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South Asian
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East Asian
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European (Non-Finnish)
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European (Finnish)
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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allele num: 890
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.935e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-1

QD
type: SiteQuality
SIO_000300: 1.136e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

DP
type: SiteQuality
SIO_000300: 1.484801e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

VQSLOD
type: SiteQuality
SIO_000300: 2.82e-1

FS
type: SiteQuality
SIO_000300: 6.769e0

GenotypeQuality
all individuals: 161
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39840
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532707988474036e-5
allele num: 65244
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

FS
type: SiteQuality
SIO_000300: 2.423e0

DP
type: SiteQuality
SIO_000300: 1.483765e6

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.12e-1

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

GenotypeQuality
all individuals: 167
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39729
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 20

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 20
allele frequency: 1.741856819369448e-3
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.94e-1

DP
type: SiteQuality
SIO_000300: 1.484941e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

QD
type: SiteQuality
SIO_000300: 1.186e1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e-1

GenotypeDepth
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65078
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.49e-1

FS
type: SiteQuality
SIO_000300: 2.859e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.480611e6

QD
type: SiteQuality
SIO_000300: 9.81e0

GenotypeQuality
all individuals: 1627
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2821
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7418
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540215014015957e-5
allele num: 64926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.5e-1

QD
type: SiteQuality
SIO_000300: 1.078e1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.475479e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 7420
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2383
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.218769043266301e-4
allele num: 16410
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 3.304e0

MQ
type: SiteQuality
SIO_000300: 5.672e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.74e-1

DP
type: SiteQuality
SIO_000300: 1.475575e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

QD
type: SiteQuality
SIO_000300: 1.453e1

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540927021696253e-5
allele num: 64896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.473167e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

MQ
type: SiteQuality
SIO_000300: 5.856e1

FS
type: SiteQuality
SIO_000300: 3.341e0

QD
type: SiteQuality
SIO_000300: 8.76e0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

VQSLOD
type: SiteQuality
SIO_000300: -1.775e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543781647523774e-5
allele num: 64776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.077e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.169e0

MQ
type: SiteQuality
SIO_000300: 5.841e1

QD
type: SiteQuality
SIO_000300: 1.055e1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.86e-1

FS
type: SiteQuality
SIO_000300: 6.183e0

DP
type: SiteQuality
SIO_000300: 1.469957e6

GenotypeQuality
all individuals: 373
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
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GenotypeQuality
all individuals: 1169
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1733
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GenotypeQuality
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GenotypeQuality
all individuals: 151
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9890
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64710
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele frequency: 3.491620111731844e-4
allele num: 11456
num of homozygotes: 1

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 7.2e-3

QD
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DP
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MQ
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BaseQRankSum
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FS
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SIO_000300: 1.837e0

MQRankSum
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ClippingRankSum
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SIO_000300: -4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 10
allele frequency: 1.54765221159501e-4
allele num: 64614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9822
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
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East Asian
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -4.53e-1

ReadPosRankSum
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BaseQRankSum
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DP
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QD
type: SiteQuality
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FS
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SIO_000300: 1.878e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
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SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.017087062652563e-4
allele num: 9832
num of homozygotes: 0

South Asian
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allele frequency: 6.095330976472023e-5
allele num: 16406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

BaseQRankSum
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SIO_000300: 1.73e0

MQ
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InbreedingCoeff
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SIO_000300: 1.2e-3

ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 9.09e-1

QD
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DP
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SIO_000300: 1.466643e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

VQSLOD
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SIO_000300: 1.67e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64540
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0960741282614e-5
allele num: 16404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.324e0

QD
type: SiteQuality
SIO_000300: 1.474e1

FS
type: SiteQuality
SIO_000300: 6.084e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e0

VQSLOD
type: SiteQuality
SIO_000300: 6.820000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.464372e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.102506825515016e-5
allele num: 64464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
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allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
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FS
type: SiteQuality
SIO_000300: 4.136e0

BaseQRankSum
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SIO_000300: -2.87e0

DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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QD
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SIO_000300: 1.194e1

ReadPosRankSum
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SIO_000300: 2.19e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.097560975609756e-5
allele num: 16400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64446
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Other
type: Population
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allele frequency: 0.0e0
allele num: 888
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.97e-1

DP
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MQRankSum
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BaseQRankSum
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MQ
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VQSLOD
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FS
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QD
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InbreedingCoeff
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SIO_000300: 2.3e-3

ClippingRankSum
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SIO_000300: -1.94e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
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allele count: 13
allele frequency: 2.018758929126033e-4
allele num: 64396
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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South Asian
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Latino
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allele frequency: 8.732099196646873e-5
allele num: 11452
num of homozygotes: 0

European (Finnish)
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allele num: 6606
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FS
type: SiteQuality
SIO_000300: 6.19e-1

MQRankSum
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MQ
type: SiteQuality
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QD
type: SiteQuality
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: -1.36e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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South Asian
type: Population
allele count: 1
allele frequency: 6.100536847242558e-5
allele num: 16392
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MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

ReadPosRankSum
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SIO_000300: 3.37e-1

ClippingRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

FS
type: SiteQuality
SIO_000300: 6.19e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 1.461669e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

QD
type: SiteQuality
SIO_000300: 1.22e1

GenotypeQuality
all individuals: 37939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2383
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7315
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3371
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.105782967886204e-5
allele num: 64396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

DP
type: SiteQuality
SIO_000300: 1.461669e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

QD
type: SiteQuality
SIO_000300: 1.22e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

GenotypeQuality
all individuals: 156
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.417634996582365e-4
allele num: 64372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 6.36e-1

MQ
type: SiteQuality
SIO_000300: 5.912e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

DP
type: SiteQuality
SIO_000300: 1.463032e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.056e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

QD
type: SiteQuality
SIO_000300: 1.253e1

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37774
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7308
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 318
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64332
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.179245283018868e-4
allele num: 8480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.46075e6

MQ
type: SiteQuality
SIO_000300: 5.994e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.033e1

MQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

FS
type: SiteQuality
SIO_000300: 5.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeQuality
all individuals: 527
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37686
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variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
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variant carriers: 0

GenotypeQuality
all individuals: 7307
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555161581288296e-5
allele num: 64302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

FS
type: SiteQuality
SIO_000300: 3.617e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 1.460109e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.459e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7308
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
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variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
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variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556129594472628e-5
allele num: 64262
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 4.102e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

QD
type: SiteQuality
SIO_000300: 1.282e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 1.459786e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

GenotypeQuality
all individuals: 184
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7296
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1829
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2812
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.115750116840629e-5
allele num: 64190
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.256e1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 5.467e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.875e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

DP
type: SiteQuality
SIO_000300: 1.458638e6

GenotypeQuality
all individuals: 402
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36988
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1228
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 742
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.111932418162619e-4
allele num: 9470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.132832080200501e-5
allele num: 63840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.984e0

VQSLOD
type: SiteQuality
SIO_000300: 7.74e-1

FS
type: SiteQuality
SIO_000300: 2.064e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 8.26e-1

DP
type: SiteQuality
SIO_000300: 1.455481e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.507e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeQuality
all individuals: 2827
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 758
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variant carriers: 0

GenotypeQuality
all individuals: 289
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variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
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variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
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variant carriers: 0

GenotypeQuality
all individuals: 2388
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1229
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7263
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63862
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110228522546743e-5
allele num: 16366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.917e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.637e0

DP
type: SiteQuality
SIO_000300: 1.455559e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e0

VQSLOD
type: SiteQuality
SIO_000300: -5.049e-1

QD
type: SiteQuality
SIO_000300: 1.023e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.24e-1

GenotypeQuality
all individuals: 269
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 160
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variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.885197850512946e-5
allele num: 40940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12516
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.708e0

FS
type: SiteQuality
SIO_000300: 2.833e0

VQSLOD
type: SiteQuality
SIO_000300: -6.427e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

DP
type: SiteQuality
SIO_000300: 1.083625e6

MQRankSum
type: SiteQuality
SIO_000300: -2.691e0

MQ
type: SiteQuality
SIO_000300: 5.604e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3988
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2330
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.086636697997548e-4
allele num: 4894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

FS
type: SiteQuality
SIO_000300: 1.902e0

DP
type: SiteQuality
SIO_000300: 1.088615e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.22e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.194e-1

QD
type: SiteQuality
SIO_000300: 3.425e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

GenotypeQuality
all individuals: 2220
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 481
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variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4056
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 1.093477e6

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.459e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4730
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
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variant carriers: 0

GenotypeQuality
all individuals: 6820
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 472
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 483
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variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 3.184713375796178e-4
allele num: 6280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4194
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.859e0

QD
type: SiteQuality
SIO_000300: 1.036e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.94e-1

DP
type: SiteQuality
SIO_000300: 1.105814e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.465e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.388002674562995e-5
allele num: 41876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2408
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.465e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.859e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

QD
type: SiteQuality
SIO_000300: 1.036e1

DP
type: SiteQuality
SIO_000300: 1.105814e6

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.715646515137225e-5
allele num: 42412
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.124889e6

MQ
type: SiteQuality
SIO_000300: 5.245e1

QD
type: SiteQuality
SIO_000300: 2.43e0

FS
type: SiteQuality
SIO_000300: 3.188e0

MQRankSum
type: SiteQuality
SIO_000300: -2.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.875e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.36e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.364401569962643e-5
allele num: 42294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.539999999999999e0

DP
type: SiteQuality
SIO_000300: 1.138131e6

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

FS
type: SiteQuality
SIO_000300: 2.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.315e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: 4.95e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6824
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1520
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3931
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17889
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.887679444707367e-5
allele num: 12678
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 1.161e0

QD
type: SiteQuality
SIO_000300: 1.484e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

DP
type: SiteQuality
SIO_000300: 1.14538e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeQuality
all individuals: 1238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 513
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17889
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5581
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3931
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6824
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4576
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.771450557906887e-4
allele num: 5198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42758
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

QD
type: SiteQuality
SIO_000300: 1.484e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 1.161e0

DP
type: SiteQuality
SIO_000300: 1.14538e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 496
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1372
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18279
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4527
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3718
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2049
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8293
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6824
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1049
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.539408866995074e-4
allele num: 6496
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.188183807439825e-4
allele num: 4570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43342
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.538e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

DP
type: SiteQuality
SIO_000300: 1.154279e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.03e-1

QD
type: SiteQuality
SIO_000300: 1.123e1

GenotypeQuality
all individuals: 1023
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3082
bin: 3.75e1
variant carriers: 0