5-148442536-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442536
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442536
    reference: chr 5
allele count: 1
allele frequency: 2.714146129627619e-5
allele num: 36844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.86C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.50C>T
  hgvsp: ENSP00000423660.1:p.Pro17Leu
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.90C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.50C>T
  hgvsp: ENSP00000425627.1:p.Pro17Leu
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.50C>T
  hgvsp: ENSP00000421860.1:p.Pro17Leu
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.50C>T
  hgvsp: ENSP00000423111.1:p.Pro17Leu
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.50C>T
  hgvsp: ENSP00000421420.1:p.Pro17Leu
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.50C>T
  hgvsp: ENSP00000313025.5:p.Pro17Leu
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-364C>T
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5258
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34595
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro17Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

5-148442538-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442538
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442537
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 37602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-367delG
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.83delG
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.47delG
  hgvsp: ENSP00000421860.1:p.Gly16AlafsTer18
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.87delG
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.47delG
  hgvsp: ENSP00000425627.1:p.Gly16AlafsTer18
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.47delG
  hgvsp: ENSP00000423660.1:p.Gly16AlafsTer18
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.47delG
  hgvsp: ENSP00000423111.1:p.Gly16AlafsTer18
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.47delG
  hgvsp: ENSP00000421420.1:p.Gly16AlafsTer18
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.47delG
  hgvsp: ENSP00000313025.5:p.Gly16AlafsTer18
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34530
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6626
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly16AlafsTer18
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: GC
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

5-148442539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442539
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442539
    reference: chr 5
allele count: 1
allele frequency: 2.63033300015782e-5
allele num: 38018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.47G>A
  hgvsp: ENSP00000421420.1:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.87G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.47G>A
  hgvsp: ENSP00000423111.1:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.47G>A
  hgvsp: ENSP00000423660.1:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.47G>A
  hgvsp: ENSP00000425627.1:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.47G>A
  hgvsp: ENSP00000313025.5:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.83G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.47G>A
  hgvsp: ENSP00000421860.1:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-367G>A
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4643
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6466
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly16Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

5-148442540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442540
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442540
    reference: chr 5
allele count: 1
allele frequency: 2.591613538589126e-5
allele num: 38586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-368G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.46G>A
  hgvsp: ENSP00000425627.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.46G>A
  hgvsp: ENSP00000313025.5:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.46G>A
  hgvsp: ENSP00000423660.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.46G>A
  hgvsp: ENSP00000421420.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.82G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.86G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.46G>A
  hgvsp: ENSP00000421860.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.46G>A
  hgvsp: ENSP00000423111.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly16Ser
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

5-148442542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442542
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442542
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 39500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.44G>A
  hgvsp: ENSP00000313025.5:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-370G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.44G>A
  hgvsp: ENSP00000421420.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.44G>A
  hgvsp: ENSP00000425627.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.44G>A
  hgvsp: ENSP00000423111.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.80G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.44G>A
  hgvsp: ENSP00000423660.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.44G>A
  hgvsp: ENSP00000421860.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.84G>A
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34263
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg15Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

5-148442545-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442545
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442545
    reference: chr 5
allele count: 1
allele frequency: 2.424595092619533e-5
allele num: 41244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.81C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.41C>T
  hgvsp: ENSP00000421420.1:p.Thr14Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.41C>T
  hgvsp: ENSP00000425627.1:p.Thr14Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.41C>T
  hgvsp: ENSP00000313025.5:p.Thr14Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.77C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-373C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.41C>T
  hgvsp: ENSP00000421860.1:p.Thr14Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.41C>T
  hgvsp: ENSP00000423660.1:p.Thr14Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.41C>T
  hgvsp: ENSP00000423111.1:p.Thr14Ile
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5651
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5855
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr14Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/5-148442551-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442551
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442551
    reference: chr 5
allele count: 4
allele frequency: 9.240436148586214e-5
allele num: 43288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.75G>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.71G>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.35G>T
  hgvsp: ENSP00000423660.1:p.Ser12Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.35G>T
  hgvsp: ENSP00000421860.1:p.Ser12Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.35G>T
  hgvsp: ENSP00000423111.1:p.Ser12Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.35G>T
  hgvsp: ENSP00000421420.1:p.Ser12Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.35G>T
  hgvsp: ENSP00000425627.1:p.Ser12Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.35G>T
  hgvsp: ENSP00000313025.5:p.Ser12Ile
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-379G>T
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33576
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6605
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser12Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

5-148442554-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442554
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442554
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 44166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.68G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.32G>A
  hgvsp: ENSP00000423660.1:p.Arg11Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.32G>A
  hgvsp: ENSP00000421420.1:p.Arg11Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.32G>A
  hgvsp: ENSP00000313025.5:p.Arg11Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-382G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.32G>A
  hgvsp: ENSP00000423111.1:p.Arg11Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.32G>A
  hgvsp: ENSP00000421860.1:p.Arg11Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.32G>A
  hgvsp: ENSP00000425627.1:p.Arg11Gln
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.72G>A
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33302
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33799
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg11Gln
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

5-148442555-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442555
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442555
    reference: chr 5
allele count: 9
allele frequency: 2.024564718585504e-4
allele num: 44454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-383C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.31C>T
  hgvsp: ENSP00000423660.1:p.Arg11Trp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.31C>T
  hgvsp: ENSP00000313025.5:p.Arg11Trp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.31C>T
  hgvsp: ENSP00000421860.1:p.Arg11Trp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.31C>T
  hgvsp: ENSP00000423111.1:p.Arg11Trp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.31C>T
  hgvsp: ENSP00000425627.1:p.Arg11Trp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.31C>T
  hgvsp: ENSP00000421420.1:p.Arg11Trp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.71C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.67C>T
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33142
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4715
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg11Trp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

5-148442555-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442555
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442555
    reference: chr 5
allele count: 1
allele frequency: 2.249516353983894e-5
allele num: 44454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.31C>A
  hgvsp: ENST00000323829.5:c.31C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.31C>A
  hgvsp: ENST00000512049.1:c.31C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.31C>A
  hgvsp: ENST00000515425.1:c.31C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.67C>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.31C>A
  hgvsp: ENST00000511307.1:c.31C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.31C>A
  hgvsp: ENST00000504690.1:c.31C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.31C>A
  hgvsp: ENST00000513604.1:c.31C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.71C>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-383C>A
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5864
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg11Arg
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/5-148442556-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442556
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442556
    reference: chr 5
allele count: 1
allele frequency: 2.216115592589309e-5
allele num: 45124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.30G>T
  hgvsp: ENSP00000425627.1:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.30G>T
  hgvsp: ENSP00000423660.1:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.30G>T
  hgvsp: ENSP00000421420.1:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.30G>T
  hgvsp: ENSP00000421860.1:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.66G>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.30G>T
  hgvsp: ENSP00000313025.5:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.70G>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-384G>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.30G>T
  hgvsp: ENSP00000423111.1:p.Glu10Asp
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu10Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

5-148442556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442556
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442556
    reference: chr 5
allele count: 1
allele frequency: 2.216115592589309e-5
allele num: 45124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.30G>A
  hgvsp: ENST00000504690.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.30G>A
  hgvsp: ENST00000323829.5:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.30G>A
  hgvsp: ENST00000513604.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.30G>A
  hgvsp: ENST00000512049.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.30G>A
  hgvsp: ENST00000511307.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.70G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.66G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.30G>A
  hgvsp: ENST00000515425.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-384G>A
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu10Glu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

5-148442562-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442562
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442562
    reference: chr 5
allele count: 1
allele frequency: 2.138945927446954e-5
allele num: 46752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.24C>T
  hgvsp: ENST00000513604.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.24C>T
  hgvsp: ENST00000504690.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.24C>T
  hgvsp: ENST00000323829.5:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.24C>T
  hgvsp: ENST00000515425.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.60C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.24C>T
  hgvsp: ENST00000512049.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.24C>T
  hgvsp: ENST00000511307.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.64C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-390C>T
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4311
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro8Pro
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

5-148442565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442565
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442565
    reference: chr 5
allele count: 1
allele frequency: 2.106948716868232e-5
allele num: 47462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.21C>T
  hgvsp: ENST00000504690.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.21C>T
  hgvsp: ENST00000511307.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-393C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.57C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.21C>T
  hgvsp: ENST00000515425.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.21C>T
  hgvsp: ENST00000323829.5:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.61C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.21C>T
  hgvsp: ENST00000513604.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.21C>T
  hgvsp: ENST00000512049.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile7Ile
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/5-148442575-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442575
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442575
    reference: chr 5
allele count: 1
allele frequency: 2.067568126369764e-5
allele num: 48366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.11G>T
  hgvsp: ENSP00000421420.1:p.Cys4Phe
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.51G>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.11G>T
  hgvsp: ENSP00000425627.1:p.Cys4Phe
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.11G>T
  hgvsp: ENSP00000421860.1:p.Cys4Phe
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.47G>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.11G>T
  hgvsp: ENSP00000423660.1:p.Cys4Phe
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.11G>T
  hgvsp: ENSP00000313025.5:p.Cys4Phe
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.11G>T
  hgvsp: ENSP00000423111.1:p.Cys4Phe
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-403G>T
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31752
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34203
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5857
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Cys4Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

5-148442596-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442596
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442596
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 47264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.26A>G
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.-11A>G
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.-11A>G
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000313025
  ensembl transcript: ENST00000323829
  gene symbol: SH3TC2
  hgvsc: ENST00000323829.5:c.-11A>G
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-424A>G
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.-11A>G
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.30A>G
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.-11A>G
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.-11A>G
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6761
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29863
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4197
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum

5-148442608-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442608
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442608
    reference: chr 5
allele count: 8
allele frequency: 1.79928928073411e-4
allele num: 44462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.14G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.18G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-436G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10591
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27295
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

5-148442609-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442609
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442609
    reference: chr 5
allele count: 1
allele frequency: 2.29821658393087e-5
allele num: 43512
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-437C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.13C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423111
  ensembl transcript: ENST00000513604
  gene symbol: SH3TC2
  hgvsc: ENST00000513604.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.17C>T
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10988
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27497
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5855
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

5-148442615-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442615
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442615
    reference: chr 5
allele count: 1
allele frequency: 2.392230036840342e-5
allele num: 41802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-443G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.-30G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.-30G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.7G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.-30G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.-30G>A
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.11G>A
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26543
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3273
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5857
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12864
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

5-148442617-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442617
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442617
    reference: chr 5
allele count: 1
allele frequency: 2.408129846361316e-5
allele num: 41526
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421420
  ensembl transcript: ENST00000511307
  gene symbol: SH3TC2
  hgvsc: ENST00000511307.1:c.-32A>C
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.-32A>C
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.-32A>C
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000511949
  gene symbol: SH3TC2
  hgvsc: ENST00000511949.1:n.9A>C
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169247
  ensembl transcript: ENST00000504091
  gene symbol: SH3TC2
  hgvsc: ENST00000504091.1:n.5A>C
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.-32A>C
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000377886
  ensembl transcript: ENST00000394358
  gene symbol: SH3TC2
  hgvsc: ENST00000394358.2:c.-445A>C
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9686
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3971
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5857
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

5-148442629-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148442629
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148442629
    reference: chr 5
allele count: 1
allele frequency: 2.707239157507174e-5
allele num: 36938
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000425627
  ensembl transcript: ENST00000504690
  gene symbol: SH3TC2
  hgvsc: ENST00000504690.1:c.-44G>C
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000421860
  ensembl transcript: ENST00000512049
  gene symbol: SH3TC2
  hgvsc: ENST00000512049.1:c.-44G>C
  variant of: http://identifiers.org/hgnc/29427
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169247
  ensembl protein: ENSP00000423660
  ensembl transcript: ENST00000515425
  gene symbol: SH3TC2
  hgvsc: ENST00000515425.1:c.-44G>C
  variant of: http://identifiers.org/hgnc/29427
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5851
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6559
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genotype quality: GenotypeQuality
  all individuals: 17113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 513
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 1736
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genotype quality: GenotypeQuality
  all individuals: 14530
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 87
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genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 180
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/5-148521608-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521608
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521608
    reference: chr 5
allele count: 1
allele frequency: 8.277460475126231e-6
allele num: 120810
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-51A>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-51A>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-51A>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-51A>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-51A>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-51A>C
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29880
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56666
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD

5-148521613-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521613
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521613
    reference: chr 5
allele count: 1
allele frequency: 8.278693953241936e-6
allele num: 120792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-46C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-46C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-46C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29880
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

5-148521628-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521628
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521627
    reference: chr 5
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-30delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-30delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-30delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-30delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-30delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-30delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-30delG
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29880
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56667
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: TG
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

5-148521631-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521631
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521631
    reference: chr 5
allele count: 3
allele frequency: 2.484883624616914e-5
allele num: 120730
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-28A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-28A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-28A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-28A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-28A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-28A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-28A>G
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29879
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-148521633-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521633
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521633
    reference: chr 5
allele count: 3
allele frequency: 2.485048292771823e-5
allele num: 120722
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-26G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-26G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-26G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-26G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-26G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-26G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-26G>C
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29877
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56667
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

5-148521634-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521634
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521634
    reference: chr 5
allele count: 1
allele frequency: 8.283357078956959e-6
allele num: 120724
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-25A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-25A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-25A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-25A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-25A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-25A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-25A>G
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ

5-148521640-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521640
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521640
    reference: chr 5
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-19C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-19C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-19C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-19C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-19C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-19C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-19C>G
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

5-148521641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521641
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521641
    reference: chr 5
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-18C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-18C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-18C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

5-148521644-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521644
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521644
    reference: chr 5
allele count: 2
allele frequency: 1.65708320214758e-5
allele num: 120694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-15T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-15T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-15T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-15T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-15T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-15T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-15T>C
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56667
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

5-148521644-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521644
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521644
    reference: chr 5
allele count: 1
allele frequency: 8.285416010737898e-6
allele num: 120694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.-15T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.-15T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.-15T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.-15T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.-15T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.-15T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.-15T>G
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56667
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

5-148521664-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521664
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521664
    reference: chr 5
allele count: 1
allele frequency: 8.289949265510494e-6
allele num: 120628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.6C>T
  hgvsp: ENST00000515171.1:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.6C>T
  hgvsp: ENST00000356541.3:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.6C>T
  hgvsp: ENST00000326685.7:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.6C>T
  hgvsp: ENST00000508983.1:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.6C>T
  hgvsp: ENST00000309868.7:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.6C>T
  hgvsp: ENST00000504238.1:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.6C>T
  hgvsp: ENST00000506113.1:c.6C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29876
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn2Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/5-148521671-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521671
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521671
    reference: chr 5
allele count: 1
allele frequency: 8.292011476143882e-6
allele num: 120598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13A>C
  hgvsp: ENSP00000310309.7:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13A>C
  hgvsp: ENSP00000420855.1:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13A>C
  hgvsp: ENSP00000425394.1:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13A>C
  hgvsp: ENSP00000315841.7:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13A>C
  hgvsp: ENSP00000348938.3:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13A>C
  hgvsp: ENSP00000421002.1:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13A>C
  hgvsp: ENSP00000421183.1:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29875
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile5Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

5-148521683-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521683
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521683
    reference: chr 5
allele count: 1
allele frequency: 8.295588406085643e-6
allele num: 120546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+12C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+12C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+12C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+12C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+12C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+12C>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+12C>G
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29875
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

5-148521683-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521683
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521683
    reference: chr 5
allele count: 1
allele frequency: 8.295588406085643e-6
allele num: 120546
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+12C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+12C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+12C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+12C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+12C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+12C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+12C>T
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29875
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56665
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

5-148521684-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521684
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521684
    reference: chr 5
allele count: 1
allele frequency: 8.29655195300833e-6
allele num: 120532
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+13T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+13T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+13T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+13T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+13T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+13T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+13T>C
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29874
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

5-148521686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521686
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521686
    reference: chr 5
allele count: 1
allele frequency: 8.296827293243064e-6
allele num: 120528
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+15C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+15C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+15C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+15C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+15C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+15C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+15C>T
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29873
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

5-148521702-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521702
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521702
    reference: chr 5
allele count: 8
allele frequency: 6.6417600664176e-5
allele num: 120450
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+31G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+31G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+31G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+31G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+31G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+31G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+31G>A
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29871
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56665
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

5-148521704-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521704
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521704
    reference: chr 5
allele count: 1
allele frequency: 8.302200083022e-6
allele num: 120450
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+33A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+33A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+33A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+33A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+33A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+33A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+33A>G
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/5-148521705-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521705
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521704
    reference: chr 5
allele count: 1
allele frequency: 8.303027283747654e-6
allele num: 120438
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+35delA
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+35delA
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+35delA
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+35delA
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+35delA
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+35delA
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+35delA
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56664
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: CA
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

5-148521711-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521711
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521711
    reference: chr 5
allele count: 29
allele frequency: 2.420337511893038e-4
allele num: 119818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+40T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+40T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+40T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+40T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+40T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+40T>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+40T>G
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29881
  bin: 9.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 56111
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 2.25e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

5-148521712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521712
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521712
    reference: chr 5
allele count: 1
allele frequency: 8.305647840531562e-6
allele num: 120400
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+41G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+41G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+41G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+41G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+41G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+41G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+41G>A
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29857
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

5-148521716-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521716
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521716
    reference: chr 5
allele count: 69
allele frequency: 5.731753916698509e-4
allele num: 120382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+45G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+45G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+45G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+45G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+45G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+45G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+45G>A
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29853
  bin: 9.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ

5-148521716-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521716
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521716
    reference: chr 5
allele count: 1
allele frequency: 8.306889734345666e-6
allele num: 120382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+45G>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+45G>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+45G>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+45G>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+45G>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+45G>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+45G>T
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29853
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

5-148521720-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521720
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521720
    reference: chr 5
allele count: 2
allele frequency: 1.661957786272229e-5
allele num: 120340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+49G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+49G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+49G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+49G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+49G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+49G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+49G>A
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29846
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56655
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

5-148521720-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521720
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521720
    reference: chr 5
allele count: 1
allele frequency: 8.309788931361144e-6
allele num: 120340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+49G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+49G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+49G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+49G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+49G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+49G>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+49G>C
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29846
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56655
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

5-148521722-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148521722
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148521722
    reference: chr 5
allele count: 1
allele frequency: 8.309650828472188e-6
allele num: 120342
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.13+51G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.13+51G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.13+51G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.13+51G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.13+51G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.13+51G>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.13+51G>A
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29846
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

5-148562974-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148562974
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148562974
    reference: chr 5
allele count: 1
allele frequency: 8.904878092218918e-6
allele num: 112298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.14-41A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.14-41A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6332T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.14-41A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.14-41A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.14-41A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.14-41A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.14-41A>G
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19157T>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1679
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum

5-148562977-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148562977
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148562976
    reference: chr 5
allele count: 1
allele frequency: 8.902975374370115e-6
allele num: 112322
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.14-35delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.14-35delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.14-35delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.14-35delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.14-35delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.14-35delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.14-35delG
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19161delC
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6336delC
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25069
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: AG
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-148562981-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148562981
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148562981
    reference: chr 5
allele count: 38484
allele frequency: 3.407291980238344e-1
allele num: 112946
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.14-34C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.14-34C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.14-34C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.14-34C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.14-34C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.14-34C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6339G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19164G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.14-34C>A
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 3.25e1
  variant carriers: 1557
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 4.25e1
  variant carriers: 3212
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 2.25e1
  variant carriers: 317
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 9.75e1
  variant carriers: 3095
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 5.75e1
  variant carriers: 3176
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.25e1
  variant carriers: 767
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 7.5e0
  variant carriers: 1199
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 2.5e0
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 13280
  bin: 2.75e1
  variant carriers: 761
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 7.75e1
  variant carriers: 1082
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 465
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 8.25e1
  variant carriers: 773
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 8.75e1
  variant carriers: 630
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 3.75e1
  variant carriers: 2405
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 4.75e1
  variant carriers: 3667
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 7.25e1
  variant carriers: 1431
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 6.75e1
  variant carriers: 1941
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 6.25e1
  variant carriers: 2623
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 5.25e1
  variant carriers: 3623
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 8.25e1
  variant carriers: 338
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 1.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 2.25e1
  variant carriers: 238
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 7.75e1
  variant carriers: 254
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.75e1
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 2.5e0
  variant carriers: 18
num of homozygotes: 6823
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

5-148562982-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148562982
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148562982
    reference: chr 5
allele count: 1
allele frequency: 8.837982111924206e-6
allele num: 113148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.14-33C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6340G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.14-33C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19165G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.14-33C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.14-33C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.14-33C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.14-33C>T
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.14-33C>T
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/5-148563006-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563006
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563006
    reference: chr 5
allele count: 1
allele frequency: 8.791054223222449e-6
allele num: 113752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.14-9C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.14-9C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6364G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.14-9C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19189G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.14-9C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.14-9C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.14-9C>A
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.14-9C>A
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8463
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

5-148563007-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563007
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563007
    reference: chr 5
allele count: 59
allele frequency: 5.179163960041433e-4
allele num: 113918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.14-8T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.14-8T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.14-8T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.14-8T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.14-8T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19190A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.14-8T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.14-8T>C
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6365A>G
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 9347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11808
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28278
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8462
  bin: 6.75e1
  variant carriers: 0
hgvs: c.14-8T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/5-148563018-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563018
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563018
    reference: chr 5
allele count: 1
allele frequency: 8.7139894386448e-6
allele num: 114758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.17C>A
  hgvsp: ENSP00000348938.3:p.Pro6His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.17C>A
  hgvsp: ENSP00000315841.7:p.Pro6His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.17C>A
  hgvsp: ENSP00000421183.1:p.Pro6His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19201G>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.17C>A
  hgvsp: ENSP00000425394.1:p.Pro6His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6376G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.17C>A
  hgvsp: ENSP00000421002.1:p.Pro6His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.17C>A
  hgvsp: ENSP00000310309.7:p.Pro6His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.17C>A
  hgvsp: ENSP00000420855.1:p.Pro6His
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28347
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8475
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro6His
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

5-148563020-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563020
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563020
    reference: chr 5
allele count: 1
allele frequency: 8.695198511382016e-6
allele num: 115006
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.19T>C
  hgvsp: ENSP00000421002.1:p.Tyr7His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.19T>C
  hgvsp: ENSP00000315841.7:p.Tyr7His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.19T>C
  hgvsp: ENSP00000421183.1:p.Tyr7His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6378A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.19T>C
  hgvsp: ENSP00000348938.3:p.Tyr7His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.19T>C
  hgvsp: ENSP00000425394.1:p.Tyr7His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.19T>C
  hgvsp: ENSP00000310309.7:p.Tyr7His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.19T>C
  hgvsp: ENSP00000420855.1:p.Tyr7His
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19203A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr7His
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

5-148563032-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563032
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563032
    reference: chr 5
allele count: 3
allele frequency: 2.573472643985795e-5
allele num: 116574
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19215G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.31C>G
  hgvsp: ENSP00000310309.7:p.Pro11Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.31C>G
  hgvsp: ENSP00000315841.7:p.Pro11Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.31C>G
  hgvsp: ENSP00000421002.1:p.Pro11Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.31C>G
  hgvsp: ENSP00000425394.1:p.Pro11Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.31C>G
  hgvsp: ENSP00000348938.3:p.Pro11Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.31C>G
  hgvsp: ENSP00000420855.1:p.Pro11Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.31C>G
  hgvsp: ENSP00000421183.1:p.Pro11Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6390G>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13451
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8532
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2839
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro11Ala
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

5-148563032-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563032
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563032
    reference: chr 5
allele count: 3
allele frequency: 2.573472643985795e-5
allele num: 116574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.31C>T
  hgvsp: ENSP00000421183.1:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.31C>T
  hgvsp: ENSP00000425394.1:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6390G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.31C>T
  hgvsp: ENSP00000348938.3:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.31C>T
  hgvsp: ENSP00000420855.1:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.31C>T
  hgvsp: ENSP00000310309.7:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.31C>T
  hgvsp: ENSP00000315841.7:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19215G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.31C>T
  hgvsp: ENSP00000421002.1:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3435
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 37000
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro11Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

5-148563036-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563036
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563036
    reference: chr 5
allele count: 2
allele frequency: 1.704622937406246e-5
allele num: 117328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.35A>G
  hgvsp: ENSP00000421183.1:p.Tyr12Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.35A>G
  hgvsp: ENSP00000310309.7:p.Tyr12Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6394T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.35A>G
  hgvsp: ENSP00000421002.1:p.Tyr12Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.35A>G
  hgvsp: ENSP00000425394.1:p.Tyr12Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.35A>G
  hgvsp: ENSP00000315841.7:p.Tyr12Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.35A>G
  hgvsp: ENSP00000420855.1:p.Tyr12Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.35A>G
  hgvsp: ENSP00000348938.3:p.Tyr12Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19219T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr12Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

5-148563040-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563040
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563040
    reference: chr 5
allele count: 1
allele frequency: 8.481620328747603e-6
allele num: 117902
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.39T>C
  hgvsp: ENST00000515171.1:c.39T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.39T>C
  hgvsp: ENST00000504238.1:c.39T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.39T>C
  hgvsp: ENST00000326685.7:c.39T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6398A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.39T>C
  hgvsp: ENST00000508983.1:c.39T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.39T>C
  hgvsp: ENST00000356541.3:c.39T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.39T>C
  hgvsp: ENST00000309868.7:c.39T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19223A>G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.39T>C
  hgvsp: ENST00000506113.1:c.39T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn13Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

5-148563043-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563043
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563043
    reference: chr 5
allele count: 1
allele frequency: 8.452513777597457e-6
allele num: 118308
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6401T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.42A>G
  hgvsp: ENST00000356541.3:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.42A>G
  hgvsp: ENST00000504238.1:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19226T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.42A>G
  hgvsp: ENST00000309868.7:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.42A>G
  hgvsp: ENST00000515171.1:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.42A>G
  hgvsp: ENST00000506113.1:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.42A>G
  hgvsp: ENST00000508983.1:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.42A>G
  hgvsp: ENST00000326685.7:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro14Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/5-148563044-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563044
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563044
    reference: chr 5
allele count: 11
allele frequency: 9.291168322183931e-5
allele num: 118392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.43C>A
  hgvsp: ENST00000504238.1:c.43C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.43C>A
  hgvsp: ENST00000515171.1:c.43C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6402G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.43C>A
  hgvsp: ENST00000309868.7:c.43C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.43C>A
  hgvsp: ENST00000508983.1:c.43C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.43C>A
  hgvsp: ENST00000326685.7:c.43C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.43C>A
  hgvsp: ENST00000506113.1:c.43C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19227G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.43C>A
  hgvsp: ENST00000356541.3:c.43C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14508
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28789
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1510
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg15Arg
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

5-148563044-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563044
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563044
    reference: chr 5
allele count: 1
allele frequency: 8.446516656530846e-6
allele num: 118392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.43C>G
  hgvsp: ENSP00000421183.1:p.Arg15Gly
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.43C>G
  hgvsp: ENSP00000425394.1:p.Arg15Gly
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6402G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.43C>G
  hgvsp: ENSP00000421002.1:p.Arg15Gly
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.43C>G
  hgvsp: ENSP00000310309.7:p.Arg15Gly
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.43C>G
  hgvsp: ENSP00000348938.3:p.Arg15Gly
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19227G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.43C>G
  hgvsp: ENSP00000315841.7:p.Arg15Gly
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.43C>G
  hgvsp: ENSP00000420855.1:p.Arg15Gly
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg15Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

5-148563044-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563044
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563044
    reference: chr 5
allele count: 9
allele frequency: 7.601864990877762e-5
allele num: 118392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.43C>T
  hgvsp: ENSP00000421183.1:p.Arg15Trp
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6402G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.43C>T
  hgvsp: ENSP00000425394.1:p.Arg15Trp
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.43C>T
  hgvsp: ENSP00000421002.1:p.Arg15Trp
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.43C>T
  hgvsp: ENSP00000315841.7:p.Arg15Trp
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.43C>T
  hgvsp: ENSP00000310309.7:p.Arg15Trp
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.43C>T
  hgvsp: ENSP00000420855.1:p.Arg15Trp
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.43C>T
  hgvsp: ENSP00000348938.3:p.Arg15Trp
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19227G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1510
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg15Trp
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

5-148563045-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563045
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563045
    reference: chr 5
allele count: 3
allele frequency: 2.529724260055654e-5
allele num: 118590
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6403C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.44G>A
  hgvsp: ENSP00000421183.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.44G>A
  hgvsp: ENSP00000425394.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.44G>A
  hgvsp: ENSP00000420855.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.44G>A
  hgvsp: ENSP00000348938.3:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.44G>A
  hgvsp: ENSP00000310309.7:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.44G>A
  hgvsp: ENSP00000315841.7:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19228C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.44G>A
  hgvsp: ENSP00000421002.1:p.Arg15Gln
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg15Gln
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

5-148563051-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563051
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563051
    reference: chr 5
allele count: 1
allele frequency: 8.40152571707022e-6
allele num: 119026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.50G>A
  hgvsp: ENSP00000421183.1:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6409C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.50G>A
  hgvsp: ENSP00000348938.3:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.50G>A
  hgvsp: ENSP00000310309.7:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.50G>A
  hgvsp: ENSP00000315841.7:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19234C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.50G>A
  hgvsp: ENSP00000421002.1:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.50G>A
  hgvsp: ENSP00000420855.1:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.50G>A
  hgvsp: ENSP00000425394.1:p.Ser17Asn
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser17Asn
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

5-148563057-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563057
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563057
    reference: chr 5
allele count: 40
allele frequency: 3.354747806833621e-4
allele num: 119234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19240T>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.56A>G
  hgvsp: ENSP00000425394.1:p.Asn19Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.56A>G
  hgvsp: ENSP00000421183.1:p.Asn19Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.56A>G
  hgvsp: ENSP00000421002.1:p.Asn19Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6415T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.56A>G
  hgvsp: ENSP00000420855.1:p.Asn19Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.56A>G
  hgvsp: ENSP00000315841.7:p.Asn19Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.56A>G
  hgvsp: ENSP00000310309.7:p.Asn19Ser
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.56A>G
  hgvsp: ENSP00000348938.3:p.Asn19Ser
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 28940
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn19Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-148563058-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563058
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563058
    reference: chr 5
allele count: 1
allele frequency: 8.386025527061704e-6
allele num: 119246
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.57T>C
  hgvsp: ENST00000506113.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6416A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.57T>C
  hgvsp: ENST00000326685.7:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.57T>C
  hgvsp: ENST00000356541.3:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.57T>C
  hgvsp: ENST00000504238.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.57T>C
  hgvsp: ENST00000515171.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.57T>C
  hgvsp: ENST00000309868.7:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.57T>C
  hgvsp: ENST00000508983.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19241A>G
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38740
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn19Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

5-148563059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563059
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563059
    reference: chr 5
allele count: 1
allele frequency: 8.384197464618687e-6
allele num: 119272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.58G>A
  hgvsp: ENSP00000310309.7:p.Val20Ile
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19242C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.58G>A
  hgvsp: ENSP00000348938.3:p.Val20Ile
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.58G>A
  hgvsp: ENSP00000315841.7:p.Val20Ile
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6417C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.58G>A
  hgvsp: ENSP00000425394.1:p.Val20Ile
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.58G>A
  hgvsp: ENSP00000420855.1:p.Val20Ile
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.58G>A
  hgvsp: ENSP00000421183.1:p.Val20Ile
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.58G>A
  hgvsp: ENSP00000421002.1:p.Val20Ile
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val20Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

5-148563060-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563060
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563060
    reference: chr 5
allele count: 8
allele frequency: 6.705783738474434e-5
allele num: 119300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.59T>C
  hgvsp: ENSP00000348938.3:p.Val20Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6418A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.59T>C
  hgvsp: ENSP00000420855.1:p.Val20Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.59T>C
  hgvsp: ENSP00000425394.1:p.Val20Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.59T>C
  hgvsp: ENSP00000310309.7:p.Val20Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.59T>C
  hgvsp: ENSP00000315841.7:p.Val20Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19243A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.59T>C
  hgvsp: ENSP00000421183.1:p.Val20Ala
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.59T>C
  hgvsp: ENSP00000421002.1:p.Val20Ala
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9392
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val20Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-148563063-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563063
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563063
    reference: chr 5
allele count: 1
allele frequency: 8.379420144126027e-6
allele num: 119340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.62T>C
  hgvsp: ENSP00000421183.1:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.62T>C
  hgvsp: ENSP00000310309.7:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.62T>C
  hgvsp: ENSP00000315841.7:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.62T>C
  hgvsp: ENSP00000420855.1:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19246A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.62T>C
  hgvsp: ENSP00000421002.1:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.62T>C
  hgvsp: ENSP00000348938.3:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6421A>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.62T>C
  hgvsp: ENSP00000425394.1:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile21Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD

5-148563074-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 148563074
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 148563074
    reference: chr 5
allele count: 2
allele frequency: 1.675097993232604e-5
allele num: 119396
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000512647
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000512647.2:n.74-6432G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421002
  ensembl transcript: ENST00000515171
  gene symbol: ABLIM3
  hgvsc: ENST00000515171.1:c.73C>T
  hgvsp: ENSP00000421002.1:p.Arg25Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000315841
  ensembl transcript: ENST00000326685
  gene symbol: ABLIM3
  hgvsc: ENST00000326685.7:c.73C>T
  hgvsp: ENSP00000315841.7:p.Arg25Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000310309
  ensembl transcript: ENST00000309868
  gene symbol: ABLIM3
  hgvsc: ENST00000309868.7:c.73C>T
  hgvsp: ENSP00000310309.7:p.Arg25Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248647
  ensembl transcript: ENST00000522685
  gene symbol: RP11-331K21.1
  hgvsc: ENST00000522685.1:n.88-19257G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000420855
  ensembl transcript: ENST00000508983
  gene symbol: ABLIM3
  hgvsc: ENST00000508983.1:c.73C>T
  hgvsp: ENSP00000420855.1:p.Arg25Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000348938
  ensembl transcript: ENST00000356541
  gene symbol: ABLIM3
  hgvsc: ENST00000356541.3:c.73C>T
  hgvsp: ENSP00000348938.3:p.Arg25Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000421183
  ensembl transcript: ENST00000504238
  gene symbol: ABLIM3
  hgvsc: ENST00000504238.1:c.73C>T
  hgvsp: ENSP00000421183.1:p.Arg25Cys
  variant of: http://identifiers.org/hgnc/29132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173210
  ensembl protein: ENSP00000425394
  ensembl transcript: ENST00000506113
  gene symbol: ABLIM3
  hgvsc: ENST00000506113.1:c.73C>T
  hgvsp: ENSP00000425394.1:p.Arg25Cys
  variant of: http://identifiers.org/hgnc/29132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Arg25Cys
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 374
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6923
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4126
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 589
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33598
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5851
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2662
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.364066193853428e-4
allele num: 4230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: -1.253e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.56e-2

FS
type: SiteQuality
SIO_000300: 4.713e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 8.74173e5

GenotypeQuality
all individuals: 935
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33710
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4436
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5852
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 8.81532e5

VQSLOD
type: SiteQuality
SIO_000300: 3.68e0

QD
type: SiteQuality
SIO_000300: 1.183e1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeQuality
all individuals: 396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33746
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5853
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 241
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.492694716027683e-5
allele num: 18206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4316
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 8.85818e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.208e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.955e0

MQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.98e-1

FS
type: SiteQuality
SIO_000300: 1.465e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.51e-2

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33882
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5853
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6324
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4827
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4364
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.119319453772107e-4
allele num: 8934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18524
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.486e0

FS
type: SiteQuality
SIO_000300: 2.801e0

VQSLOD
type: SiteQuality
SIO_000300: -9.824000000000001e-1

DP
type: SiteQuality
SIO_000300: 8.90045e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.039e0

MQRankSum
type: SiteQuality
SIO_000300: -8.37e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

QD
type: SiteQuality
SIO_000300: 1.118e1

GenotypeQuality
all individuals: 270
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1319
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5946
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33980
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5854
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.58e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

DP
type: SiteQuality
SIO_000300: 9.00516e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.652e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
all individuals: 385
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5878
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1441
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5480
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33890
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20116
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.076923076923077e-4
allele num: 3250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-1

DP
type: SiteQuality
SIO_000300: 9.14175e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.133e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

QD
type: SiteQuality
SIO_000300: 1.113e1

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4993
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5861
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33707
bin: 2.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.881998682600922e-4
allele num: 21254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3528
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.747e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.13e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.874e0

VQSLOD
type: SiteQuality
SIO_000300: 4.81e-1

DP
type: SiteQuality
SIO_000300: 9.30851e5

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.074e1

GenotypeQuality
all individuals: 409
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4768
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.145e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 9.40033e5

FS
type: SiteQuality
SIO_000300: 1.0942e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 1.34e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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bin: 8.25e1
variant carriers: 2

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 4.112217856163757e-4
allele num: 21886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3688
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
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SIO_000300: 1.152e1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
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SIO_000300: -2.36e-1

InbreedingCoeff
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SIO_000300: 1.04e-2

DP
type: SiteQuality
SIO_000300: 9.43023e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 3.258e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.075500107550011e-4
allele num: 9298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1032
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.258e0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

DP
type: SiteQuality
SIO_000300: 9.43023e5

QD
type: SiteQuality
SIO_000300: 1.152e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.069976460517869e-4
allele num: 9346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3762
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 2.391e0

DP
type: SiteQuality
SIO_000300: 9.45885e5

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.116e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1072
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.489539373260304e-5
allele num: 22274
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 9.45885e5

FS
type: SiteQuality
SIO_000300: 2.391e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3990
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.061345786457228e-4
allele num: 9422
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 23270
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.964e0

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.054629824931449e-4
allele num: 9482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 23728
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3632
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4028
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.03e1

VQSLOD
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 24326
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 4100
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East Asian
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allele count: 1
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allele num: 3696
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3484
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

QD
type: SiteQuality
SIO_000300: 1.347e1

DP
type: SiteQuality
SIO_000300: 9.07464e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 1

Other
type: Population
allele count: 1
allele frequency: 2.958579881656805e-3
allele num: 338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 2.693965517241379e-4
allele num: 22272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1042
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3154
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.08084738434933e-4
allele num: 9252
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

FS
type: SiteQuality
SIO_000300: 1.388e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
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SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

QD
type: SiteQuality
SIO_000300: 1.25e1

DP
type: SiteQuality
SIO_000300: 8.61207e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.09e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.57e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3088
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.09217999126256e-4
allele num: 9156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 998
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

FS
type: SiteQuality
SIO_000300: 2.102e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.22e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.53043e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 920
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 20720
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2862
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3202
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.102535832414554e-4
allele num: 9070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.883e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.331e0

DP
type: SiteQuality
SIO_000300: 8.34759e5

MQRankSum
type: SiteQuality
SIO_000300: -1.099e0

VQSLOD
type: SiteQuality
SIO_000300: -2.55e0

FS
type: SiteQuality
SIO_000300: 2.447e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.45e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.84e-1

QD
type: SiteQuality
SIO_000300: 8.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.868075163080518e-5
allele num: 20542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9052
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.48e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.031e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.30801e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.139731023478459e-4
allele num: 8774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2318
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.03456e5

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.97e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

QD
type: SiteQuality
SIO_000300: 1.485e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.790451e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.665e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.37e-1

QD
type: SiteQuality
SIO_000300: 1.46e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66396
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10270
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South Asian
type: Population
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allele frequency: 6.076810889645114e-5
allele num: 16456
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.986e1

FS
type: SiteQuality
SIO_000300: 3.992e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.155e0

MQRankSum
type: SiteQuality
SIO_000300: -5.14e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.402e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.602811035918792e-4
allele num: 11526
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66368
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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DP
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 295
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10250
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.520795660036166e-5
allele num: 66360
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQ
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ClippingRankSum
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FS
type: SiteQuality
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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African
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allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.506931886678722e-5
allele num: 66360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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MQRankSum
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DP
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.507340749449821e-5
allele num: 66342
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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QD
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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SIO_000300: 5.789797e6

ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66336
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 9.75800156128025e-5
allele num: 10248
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 8.69e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66336
num of homozygotes: 0

Latino
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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South Asian
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allele frequency: 1.216101179618144e-4
allele num: 16446
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 5.23e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.507477086348288e-5
allele num: 66336
num of homozygotes: 0

Latino
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Other
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South Asian
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ClippingRankSum
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BaseQRankSum
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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Latino
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East Asian
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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QD
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ClippingRankSum
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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South Asian
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MQ
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FS
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ClippingRankSum
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ReadPosRankSum
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DP
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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South Asian
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East Asian
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Other
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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DP
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Latino
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South Asian
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European (Non-Finnish)
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Other
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FS
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VQSLOD
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ReadPosRankSum
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SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 2.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.056e0

QD
type: SiteQuality
SIO_000300: 1.231e1

DP
type: SiteQuality
SIO_000300: 5.787393e6

MQ
type: SiteQuality
SIO_000300: 5.99e1

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56665
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.800078400627205e-5
allele num: 10204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.49e-1

FS
type: SiteQuality
SIO_000300: 1.174e0

VQSLOD
type: SiteQuality
SIO_000300: 4.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

DP
type: SiteQuality
SIO_000300: 5.787031e6

GenotypeQuality
all individuals: 919
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56665
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.14e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 4.809e0

QD
type: SiteQuality
SIO_000300: 1.429e1

DP
type: SiteQuality
SIO_000300: 5.786856e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.64e0

VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

GenotypeQuality
all individuals: 430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.06426564341179e-5
allele num: 66194
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.96347928529354e-4
allele num: 10186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.514e0

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

DP
type: SiteQuality
SIO_000300: 5.78305e6

QD
type: SiteQuality
SIO_000300: 1.293e1

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56665
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66200
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.086427267194157e-5
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.83e0

DP
type: SiteQuality
SIO_000300: 5.782433e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.631e0

VQSLOD
type: SiteQuality
SIO_000300: -5.78e-2

FS
type: SiteQuality
SIO_000300: 2.096e0

QD
type: SiteQuality
SIO_000300: 1.216e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510756586898719e-5
allele num: 66192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.399e0

MQRankSum
type: SiteQuality
SIO_000300: -2.56e-1

DP
type: SiteQuality
SIO_000300: 5.782197e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.56e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 5.141e0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

MQ
type: SiteQuality
SIO_000300: 6.03e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 293
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 614
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 472
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 150
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516990291262136e-4
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.859988168014199e-5
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.113094875388459e-4
allele num: 65644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.188e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

QD
type: SiteQuality
SIO_000300: 4.2e-1

DP
type: SiteQuality
SIO_000300: 5.784609e6

FS
type: SiteQuality
SIO_000300: 3.05e1

VQSLOD
type: SiteQuality
SIO_000300: -1.153e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQ
type: SiteQuality
SIO_000300: 5.927e1

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56653
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511258878645912e-5
allele num: 66170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.564e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

FS
type: SiteQuality
SIO_000300: 9.356999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.722e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

QD
type: SiteQuality
SIO_000300: 1.534e1

DP
type: SiteQuality
SIO_000300: 5.777866e6

MQ
type: SiteQuality
SIO_000300: 5.927e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.74e-1

GenotypeQuality
all individuals: 307
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56658
bin: 9.75e1
variant carriers: 69

GenotypeQuality
all individuals: 477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.968503937007874e-4
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 49
allele frequency: 7.406287787182587e-4
allele num: 66160
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.434570906877663e-4
allele num: 16430
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.216333622936577e-3
allele num: 11510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.777347e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.37e0

QD
type: SiteQuality
SIO_000300: 1.335e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 8.25e1
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GenotypeQuality
all individuals: 56658
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511487303506651e-5
allele num: 66160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

DP
type: SiteQuality
SIO_000300: 5.777347e6

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.37e0

QD
type: SiteQuality
SIO_000300: 1.335e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.970055161544523e-4
allele num: 10152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.473e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 5.776511e6

QD
type: SiteQuality
SIO_000300: 1.586e1

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66132
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.850275807722617e-5
allele num: 10152
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.586e1

FS
type: SiteQuality
SIO_000300: 1.473e0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.33e0

DP
type: SiteQuality
SIO_000300: 5.776511e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

GenotypeQuality
all individuals: 161
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56658
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.508e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 5.776583e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 1965
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16272
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25066
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4582
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166044776119403e-4
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.855e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.471e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.343457e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

GenotypeQuality
all individuals: 1017
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2353
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
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variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16323
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variant carriers: 0

GenotypeQuality
all individuals: 542
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variant carriers: 0

GenotypeQuality
all individuals: 389
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variant carriers: 0

GenotypeQuality
all individuals: 1809
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variant carriers: 0

GenotypeQuality
all individuals: 4571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.902951079421667e-5
allele num: 10098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.06e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 8.99e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 2.345206e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.06e-1

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 147

GenotypeQuality
all individuals: 401
bin: 1.75e1
variant carriers: 170

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 58

GenotypeQuality
all individuals: 31749
bin: 9.75e1
variant carriers: 30137

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 269

GenotypeQuality
all individuals: 145
bin: 5.25e1
variant carriers: 119

GenotypeQuality
all individuals: 267
bin: 2.75e1
variant carriers: 117

GenotypeQuality
all individuals: 287
bin: 3.25e1
variant carriers: 124

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 109

GenotypeQuality
all individuals: 625
bin: 9.25e1
variant carriers: 310

GenotypeQuality
all individuals: 3883
bin: 6.75e1
variant carriers: 126

GenotypeQuality
all individuals: 568
bin: 7.5e0
variant carriers: 68

GenotypeQuality
all individuals: 1235
bin: 7.25e1
variant carriers: 148

GenotypeQuality
all individuals: 15456
bin: 6.25e1
variant carriers: 147

South Asian
type: Population
allele count: 3936
allele frequency: 3.690922730682671e-1
allele num: 10664
num of homozygotes: 745

East Asian
type: Population
allele count: 4348
allele frequency: 5.085380116959064e-1
allele num: 8550
num of homozygotes: 1107

Other
type: Population
allele count: 274
allele frequency: 3.357843137254902e-1
allele num: 816
num of homozygotes: 38

African
type: Population
allele count: 2555
allele frequency: 2.486376021798365e-1
allele num: 10276
num of homozygotes: 322

European (Finnish)
type: Population
allele count: 2154
allele frequency: 3.261659600242278e-1
allele num: 6604
num of homozygotes: 370

Latino
type: Population
allele count: 2962
allele frequency: 2.585996158547232e-1
allele num: 11454
num of homozygotes: 379

European (Non-Finnish)
type: Population
allele count: 22255
allele frequency: 3.446006627233594e-1
allele num: 64582
num of homozygotes: 3862

FS
type: SiteQuality
SIO_000300: 5.261e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.71e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 1.55e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.517e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

DP
type: SiteQuality
SIO_000300: 2.663184e6

GenotypeQuality
all individuals: 467
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 798
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variant carriers: 0

GenotypeQuality
all individuals: 687
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variant carriers: 0

GenotypeQuality
all individuals: 2850
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 34837
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variant carriers: 0

GenotypeQuality
all individuals: 206
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GenotypeQuality
all individuals: 8468
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variant carriers: 0

GenotypeQuality
all individuals: 722
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variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3505
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546838262591263e-5
allele num: 64648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.377e0

VQSLOD
type: SiteQuality
SIO_000300: 7.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.892e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

QD
type: SiteQuality
SIO_000300: 1.182e1

DP
type: SiteQuality
SIO_000300: 1.662517e6

GenotypeQuality
all individuals: 35236
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
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GenotypeQuality
all individuals: 712
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
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variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
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variant carriers: 0

GenotypeQuality
all individuals: 3136
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3494
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GenotypeQuality
all individuals: 2527
bin: 7.25e1
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GenotypeQuality
all individuals: 605
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.018759018759019e-5
allele num: 11088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.855e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.923e0

DP
type: SiteQuality
SIO_000300: 1.669799e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.252e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

QD
type: SiteQuality
SIO_000300: 8.619999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

GenotypeQuality
all individuals: 117
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
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GenotypeQuality
all individuals: 496
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.75e1
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GenotypeQuality
all individuals: 35280
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variant carriers: 0

GenotypeQuality
all individuals: 51
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GenotypeQuality
all individuals: 3179
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GenotypeQuality
all individuals: 63
bin: 4.25e1
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GenotypeQuality
all individuals: 605
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GenotypeQuality
all individuals: 498
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GenotypeQuality
all individuals: 2834
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GenotypeQuality
all individuals: 711
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GenotypeQuality
all individuals: 3496
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variant carriers: 59

GenotypeQuality
all individuals: 2526
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 54
allele frequency: 8.322544849269465e-4
allele num: 64884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.78858880343409e-4
allele num: 11182
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.940993788819876e-4
allele num: 10304
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.201923076923077e-3
allele num: 832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 5.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 1.671253e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

QD
type: SiteQuality
SIO_000300: 1.48e1

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 606
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GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 61
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GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 3056
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GenotypeQuality
all individuals: 258
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GenotypeQuality
all individuals: 427
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GenotypeQuality
all individuals: 1502
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GenotypeQuality
all individuals: 215
bin: 3.75e1
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GenotypeQuality
all individuals: 712
bin: 9.25e1
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GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2530
bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.480325644504748e-5
allele num: 11792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

FS
type: SiteQuality
SIO_000300: 2.818e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.631e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.676933e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.38e-1

GenotypeQuality
all individuals: 205
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535296465747536e-5
allele num: 65134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11974
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.096e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.42e-1

QD
type: SiteQuality
SIO_000300: 1.274e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.57e0

MQRankSum
type: SiteQuality
SIO_000300: -1.112e0

DP
type: SiteQuality
SIO_000300: 1.678898e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.052875809012089e-5
allele num: 65512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.638252367858234e-5
allele num: 13092
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

DP
type: SiteQuality
SIO_000300: 1.695363e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

QD
type: SiteQuality
SIO_000300: 1.102e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.895752895752896e-4
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13092
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

DP
type: SiteQuality
SIO_000300: 1.695363e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.102e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

DP
type: SiteQuality
SIO_000300: 1.702619e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

QD
type: SiteQuality
SIO_000300: 1.904e1

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: -6.038e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.120478496154942e-5
allele num: 14044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 1.34e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.707759e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

FS
type: SiteQuality
SIO_000300: 2.316e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14336
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.711666e6

VQSLOD
type: SiteQuality
SIO_000300: -2.77e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

FS
type: SiteQuality
SIO_000300: 3.155e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 5.557099194220616e-4
allele num: 14396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.550142571133895e-5
allele num: 65932
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 8603
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65932
num of homozygotes: 0

African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

South Asian
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FS
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: 8.0e-4

MQ
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SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 14396
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
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allele count: 8
allele frequency: 7.702676680146351e-4
allele num: 10386
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65932
num of homozygotes: 0

East Asian
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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DP
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BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14548
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.031589159037167e-5
allele num: 65972
num of homozygotes: 0

ClippingRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 14882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.513500423780119e-5
allele num: 66072
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
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VQSLOD
type: SiteQuality
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DP
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BaseQRankSum
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FS
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MQ
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MQRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.050155791511632e-5
allele num: 66114
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 2.790071194920146e-3
allele num: 10394
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 4.652399308786388e-4
allele num: 15046
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Other
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QD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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MQ
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DP
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VQSLOD
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ClippingRankSum
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SIO_000300: -3.29e-1

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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allele frequency: 8.680555555555556e-5
allele num: 11520
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African
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East Asian
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QD
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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East Asian
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MQ
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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African
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Other
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European (Non-Finnish)
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Latino
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VQSLOD
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MQRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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African
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type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.719878e6

MQ
type: SiteQuality
SIO_000300: 5.853e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.485e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 1.5843e1

QD
type: SiteQuality
SIO_000300: 1.453e1