11-14902140-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902140
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902140
    reference: chr 11
allele count: 2
allele frequency: 1.657357840131263e-5
allele num: 120674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*138A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*138A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.542A>G
  hgvsp: ENSP00000334592.5:p.Gln181Arg
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.446A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.377A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.417A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-235A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1387A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*138A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln181Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

11-14902155-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902155
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902155
    reference: chr 11
allele count: 3
allele frequency: 2.491818529162583e-5
allele num: 120394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1402C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-250C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*123C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*123C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.431C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.527C>G
  hgvsp: ENSP00000334592.5:p.Pro176Arg
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.402C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.362C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*123C>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7797
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro176Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-14902160-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902160
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902160
    reference: chr 11
allele count: 1
allele frequency: 8.314072398942449e-6
allele num: 120278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.397T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.357T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*118T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-255T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.522T>A
  hgvsp: ENST00000334636.5:c.522T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*118T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1407T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*118T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.426T>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22876
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly174Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-14902167-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902167
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902167
    reference: chr 11
allele count: 2
allele frequency: 1.665057111458923e-5
allele num: 120116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*111A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1414A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.390A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.515A>G
  hgvsp: ENSP00000334592.5:p.Tyr172Cys
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.350A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*111A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*111A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-262A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.419A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr172Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS

11-14902177-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902177
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902177
    reference: chr 11
allele count: 3
allele frequency: 2.502419005038204e-5
allele num: 119884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*101A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*101A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.505A>G
  hgvsp: ENSP00000334592.5:p.Ile169Val
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.340A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*101A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.409A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-272A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.380A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1424A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile169Val
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP

11-14902180-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902180
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902180
    reference: chr 11
allele count: 1
allele frequency: 8.352683717278361e-6
allele num: 119722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1427G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.377G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.502G>A
  hgvsp: ENSP00000334592.5:p.Ala168Thr
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.482G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.337G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-275G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.406G>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala168Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-14902185-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902185
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902185
    reference: chr 11
allele count: 12
allele frequency: 1.002372281065188e-4
allele num: 119716
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.477A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*93A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.372A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.401A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*93A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.332A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*93A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.497A>G
  hgvsp: ENSP00000334592.5:p.Asn166Ser
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-280A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1432A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24936
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn166Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-14902186-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902186
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902186
    reference: chr 11
allele count: 1
allele frequency: 8.354498061756449e-6
allele num: 119696
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.496A>C
  hgvsp: ENSP00000334592.5:p.Asn166His
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-281A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.331A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*92A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.476A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*92A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.400A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*92A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.371A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1433A>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn166His
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

11-14902197-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902197
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902197
    reference: chr 11
allele count: 1
allele frequency: 8.367360599772408e-6
allele num: 119512
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*81C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.320C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*81C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.389C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*81C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.465C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.485C>A
  hgvsp: ENSP00000334592.5:p.Thr162Asn
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1444C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-292C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.360C>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr162Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-14902205-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902205
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902205
    reference: chr 11
allele count: 1
allele frequency: 8.385041086701324e-6
allele num: 119260
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.477G>C
  hgvsp: ENSP00000334592.5:p.Leu159Phe
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*73G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.312G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1452G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-300G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*73G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*73G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.457G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.381G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.352G>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu159Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

11-14902208-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902208
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902208
    reference: chr 11
allele count: 1
allele frequency: 8.385462961410099e-6
allele num: 119254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*70C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*70C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*70C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-303C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.309C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1455C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.474C>A
  hgvsp: ENST00000334636.5:c.474C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.349C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.454C>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.378C>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20896
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile158Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

11-14902215-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902215
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902215
    reference: chr 11
allele count: 16
allele frequency: 1.341809094111135e-4
allele num: 119242
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.467C>G
  hgvsp: ENSP00000334592.5:p.Ser156Cys
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.447C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*63C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.371C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1462C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.342C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*63C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*63C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.302C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-310C>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20884
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser156Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/11-14902239-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902239
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902239
    reference: chr 11
allele count: 1
allele frequency: 8.400114241553686e-6
allele num: 119046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.423G>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.318G>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.347G>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.443G>T
  hgvsp: ENSP00000334592.5:p.Gly148Val
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*39G>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*39G>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.278G>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-334G>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*39G>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1486G>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly148Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

11-14902244-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902244
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902244
    reference: chr 11
allele count: 2
allele frequency: 1.678866429386878e-5
allele num: 119128
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*34T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.342T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*34T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.418T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-339T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*34T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.273T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.438T>C
  hgvsp: ENST00000334636.5:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1491T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.313T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr146Tyr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

11-14902249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902249
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902249
    reference: chr 11
allele count: 2
allele frequency: 1.679458542565877e-5
allele num: 119086
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.433C>T
  hgvsp: ENSP00000334592.5:p.Arg145Ter
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*29C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.413C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.337C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*29C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*29C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.308C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1496C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.268C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-344C>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg145Ter
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

11-14902252-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902252
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902252
    reference: chr 11
allele count: 3
allele frequency: 2.518384204694268e-5
allele num: 119124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.410T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.305T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1499T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.430T>C
  hgvsp: ENSP00000334592.5:p.Phe144Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-347T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.265T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.334T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*26T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe144Leu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

11-14902255-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902255
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902255
    reference: chr 11
allele count: 1
allele frequency: 8.395741679819996e-6
allele num: 119108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.407A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*23A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*23A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.427A>T
  hgvsp: ENSP00000334592.5:p.Ser143Cys
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*23A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1502A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.262A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.302A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.331A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-350A>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser143Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-14902255-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902255
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902255
    reference: chr 11
allele count: 4
allele frequency: 3.358296671927998e-5
allele num: 119108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*23A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.407A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1502A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-350A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.262A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.427A>G
  hgvsp: ENSP00000334592.5:p.Ser143Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.331A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.302A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*23A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*23A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser143Gly
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

11-14902259-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902259
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902259
    reference: chr 11
allele count: 1
allele frequency: 8.39785686692756e-6
allele num: 119078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.327A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1506A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*19A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.423A>G
  hgvsp: ENST00000334636.5:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.298A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*19A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.403A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-354A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*19A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.258A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val141Val
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

11-14902261-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902261
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902261
    reference: chr 11
allele count: 1
allele frequency: 8.403643819960336e-6
allele num: 118996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*17G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1508G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.421G>C
  hgvsp: ENSP00000334592.5:p.Val141Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.296G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*17G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*17G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.401G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-356G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.325G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.256G>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7678
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7365
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val141Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-14902264-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902264
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902264
    reference: chr 11
allele count: 2
allele frequency: 1.680361613819294e-5
allele num: 119022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.322G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.398G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1511G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.418G>A
  hgvsp: ENSP00000334592.5:p.Ala140Thr
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-359G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.253G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.293G>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26381
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala140Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

11-14902270-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902270
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902270
    reference: chr 11
allele count: 2
allele frequency: 1.679797080512674e-5
allele num: 119062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-365C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.287C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.392C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.247C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1517C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.316C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.412C>T
  hgvsp: ENSP00000334592.5:p.Arg138Ter
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg138Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-14902279-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902279
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902279
    reference: chr 11
allele count: 1
allele frequency: 8.410853365182432e-6
allele num: 118894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.307G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1526G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.113G>C
  hgvsp: ENSP00000465097.1:p.Ter38SerextTer20
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.238G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.278G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.383G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.113G>C
  hgvsp: ENSP00000432087.2:p.Ter38SerextTer20
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.403G>C
  hgvsp: ENSP00000334592.5:p.Asp135His
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-374G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.113G>C
  hgvsp: ENSP00000466060.1:p.Ter38SerextTer20
  variant of: http://identifiers.org/hgnc/20580
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ter38SerextTer20
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

11-14902281-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902281
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902281
    reference: chr 11
allele count: 1
allele frequency: 8.423038695439767e-6
allele num: 118722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1528T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.276T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.111T>C
  hgvsp: ENST00000532805.1:c.111T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.111T>C
  hgvsp: ENST00000530609.1:c.111T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.401T>C
  hgvsp: ENSP00000334592.5:p.Val134Ala
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.305T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.111T>C
  hgvsp: ENST00000534686.1:c.111T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.381T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.236T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-376T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val134Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

11-14902290-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902290
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902290
    reference: chr 11
allele count: 6
allele frequency: 5.071936972729885e-5
allele num: 118298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-385G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.392G>A
  hgvsp: ENSP00000334592.5:p.Arg131Gln
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.227G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1537G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.267G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.102G>A
  hgvsp: ENST00000530609.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.296G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.102G>A
  hgvsp: ENST00000534686.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.372G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.102G>A
  hgvsp: ENST00000532805.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46113
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg131Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

11-14902291-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902291
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902291
    reference: chr 11
allele count: 1
allele frequency: 8.472852979055108e-6
allele num: 118024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.101C>T
  hgvsp: ENSP00000466060.1:p.Pro34Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.391C>T
  hgvsp: ENSP00000334592.5:p.Arg131Ter
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.101C>T
  hgvsp: ENSP00000432087.2:p.Pro34Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1538C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.226C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.295C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-386C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.101C>T
  hgvsp: ENSP00000465097.1:p.Pro34Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.371C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.266C>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg131Ter
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

11-14902305-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902305
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902305
    reference: chr 11
allele count: 1
allele frequency: 8.670921198668147e-6
allele num: 115328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.87A>T
  hgvsp: ENSP00000465097.1:p.Gln29His
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.87A>T
  hgvsp: ENSP00000432087.2:p.Gln29His
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.357A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.377A>T
  hgvsp: ENSP00000334592.5:p.Asn126Ile
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.252A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1552A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.87A>T
  hgvsp: ENSP00000466060.1:p.Gln29His
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.281A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-400A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.212A>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn126Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

11-14902307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902307
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902307
    reference: chr 11
allele count: 28
allele frequency: 2.499776805642354e-4
allele num: 112010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1554C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.85C>T
  hgvsp: ENSP00000432087.2:p.Gln29Ter
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.85C>T
  hgvsp: ENSP00000465097.1:p.Gln29Ter
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.279C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.210C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.250C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.375C>T
  hgvsp: ENST00000334636.5:c.375C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.85C>T
  hgvsp: ENSP00000466060.1:p.Gln29Ter
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-402C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.355C>T
  variant of: http://identifiers.org/hgnc/20580
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5131
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21338
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6954
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18530
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln29Ter
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

11-14902308-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902308
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902308
    reference: chr 11
allele count: 1
allele frequency: 8.927136710171579e-6
allele num: 112018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1555T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.84T>C
  hgvsp: ENST00000532805.1:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.84T>C
  hgvsp: ENST00000530609.1:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-403T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.374T>C
  hgvsp: ENSP00000334592.5:p.Leu125Pro
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.84T>C
  hgvsp: ENST00000534686.1:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.278T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.209T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.354T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.249T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu125Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-14902310-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902310
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902310
    reference: chr 11
allele count: 1
allele frequency: 9.016807328860996e-6
allele num: 110904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.207A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.352A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.247A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.82A>T
  hgvsp: ENSP00000465097.1:p.Thr28Ser
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1557A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.82A>T
  hgvsp: ENSP00000432087.2:p.Thr28Ser
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.372A>T
  hgvsp: ENSP00000334592.5:p.Leu124Phe
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.82A>T
  hgvsp: ENSP00000466060.1:p.Thr28Ser
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-405A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.276A>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu124Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-14902317-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902317
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902316
    reference: chr 11
allele count: 12
allele frequency: 1.168793220999318e-4
allele num: 102670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-4delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-4delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-413delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-4delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-4delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-4delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-4delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1565delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-4delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-4delT
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5995
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15839
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15159
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
hgvs: c.368-4delT
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: GA
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

11-14902325-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902325
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902325
    reference: chr 11
allele count: 1
allele frequency: 1.09421162052741e-5
allele num: 91390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-11T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-11T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-11T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-11T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-11T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-420T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-11T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-11T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1572T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-11T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9926
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17645
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

11-14902325-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902325
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902324
    reference: chr 11
allele count: 6
allele frequency: 6.56526972316446e-5
allele num: 91390
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-12delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-12delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-12delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-12delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-12delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-12delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1573delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-12delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-12delA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-421delA
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11307
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: AT
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-14902326-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902326
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902326
    reference: chr 11
allele count: 475
allele frequency: 5.209247236357256e-3
allele num: 91184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-12A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1573A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-421A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-12A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-12A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-12A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-12A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-12A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-12A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-12A>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11338
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10832
  bin: 2.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 17684
  bin: 1.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 1.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 3.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 9869
  bin: 2.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 19433
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 9.75e1
  variant carriers: 452
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 4
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

11-14902328-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902328
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902328
    reference: chr 11
allele count: 2
allele frequency: 2.194522471910112e-5
allele num: 91136
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-14A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-14A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-14A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-14A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-14A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-14A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-423A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-14A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-14A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1575A>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17830
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

11-14902340-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902340
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902340
    reference: chr 11
allele count: 1
allele frequency: 1.291589171316388e-5
allele num: 77424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-26T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1587T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-435T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26572
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9202
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

11-14902341-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902341
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902341
    reference: chr 11
allele count: 2
allele frequency: 2.643125231273458e-5
allele num: 75668
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-436A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-27A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-27A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1588A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-27A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-27A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-27A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-27A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-27A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-27A>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22408
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6612
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

11-14902354-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902354
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902354
    reference: chr 11
allele count: 45
allele frequency: 6.906925343811395e-4
allele num: 65152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-40A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-40A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-40A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-449A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-40A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-40A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-40A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-40A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-40A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1601A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18173
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 18917
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 7166
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5838
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

11-14902362-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14902362
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14902362
    reference: chr 11
allele count: 1
allele frequency: 1.70299727520436e-5
allele num: 58720
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.78-48A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.78-48A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.348-48A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.243-48A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.78-48A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.78-457A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.67-1609A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.272-48A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.203-48A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.368-48A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7076
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8401
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3527
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

11-14907277-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907277
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907277
    reference: chr 11
allele count: 1
allele frequency: 8.333611120370679e-6
allele num: 119996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+45A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+45A>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6891
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

11-14907281-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907281
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907281
    reference: chr 11
allele count: 5
allele frequency: 4.16611118517531e-5
allele num: 120016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+41T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+41T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

11-14907285-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907285
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907285
    reference: chr 11
allele count: 3
allele frequency: 2.498459283441878e-5
allele num: 120074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+37A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+37A>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26250
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-14907293-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907293
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907293
    reference: chr 11
allele count: 3
allele frequency: 2.494802494802495e-5
allele num: 120250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+29T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+29T>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26704
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6798
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

11-14907300-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907300
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907300
    reference: chr 11
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+22T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+22T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

11-14907307-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907307
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907307
    reference: chr 11
allele count: 1
allele frequency: 8.291873963515755e-6
allele num: 120600
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+15A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+15A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

11-14907309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907309
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907309
    reference: chr 11
allele count: 2
allele frequency: 1.657660047077545e-5
allele num: 120652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+13G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+13G>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

11-14907313-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907313
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907312
    reference: chr 11
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+8delT
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+8delT
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24077
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.367+8delT
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: TA
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

11-14907319-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907319
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907319
    reference: chr 11
allele count: 2
allele frequency: 1.655245472903632e-5
allele num: 120828
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+3A>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+3A>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.367+3A>T
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

11-14907321-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907321
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907321
    reference: chr 11
allele count: 2
allele frequency: 1.654971534489607e-5
allele num: 120848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66+1G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202+1G>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.25e1
  variant carriers: 0
hgvs: c.367+1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

11-14907322-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907322
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907322
    reference: chr 11
allele count: 1
allele frequency: 8.27417299640901e-6
allele num: 120858
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.66G>C
  hgvsp: ENSP00000466604.1:p.Val23Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.77G>C
  hgvsp: ENSP00000466060.1:p.Arg26Thr
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.242G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.367G>C
  hgvsp: ENSP00000334592.5:p.Gly123Arg
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.77G>C
  hgvsp: ENSP00000432087.2:p.Arg26Thr
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.271G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.202G>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.77G>C
  hgvsp: ENSP00000435484.1:p.Arg26Thr
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.77G>C
  hgvsp: ENSP00000465097.1:p.Arg26Thr
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.347G>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly123Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

11-14907337-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907337
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907337
    reference: chr 11
allele count: 3
allele frequency: 2.478970070568015e-5
allele num: 121018
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.62A>G
  hgvsp: ENSP00000432087.2:p.Asp21Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.256A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.332A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.62A>G
  hgvsp: ENSP00000435484.1:p.Asp21Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.187A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.227A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.62A>G
  hgvsp: ENSP00000465097.1:p.Asp21Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.352A>G
  hgvsp: ENSP00000334592.5:p.Met118Val
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.62A>G
  hgvsp: ENSP00000466060.1:p.Asp21Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.51A>G
  hgvsp: ENSP00000466604.1:p.Met18Val
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Met118Val
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

11-14907359-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907359
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907359
    reference: chr 11
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.40A>C
  hgvsp: ENSP00000432087.2:p.Met14Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.205A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.40A>C
  hgvsp: ENSP00000435484.1:p.Met14Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.40A>C
  hgvsp: ENSP00000465097.1:p.Met14Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.234A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.29A>C
  hgvsp: ENST00000525015.1:c.29A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.40A>C
  hgvsp: ENSP00000466060.1:p.Met14Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.165A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.310A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.330A>C
  hgvsp: ENST00000334636.5:c.330A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met14Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-14907360-GGTCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907360
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907356
    reference: chr 11
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.35_38delAGAC
  hgvsp: ENSP00000432087.2:p.Gln12ProfsTer235
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.305_308delAGAC
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.200_203delAGAC
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.35_38delAGAC
  hgvsp: ENSP00000435484.1:p.Gln12ProfsTer36
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.35_38delAGAC
  hgvsp: ENSP00000466060.1:p.Gln12ProfsTer393
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.35_38delAGAC
  hgvsp: ENSP00000465097.1:p.Gln12ProfsTer151
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.24_27delAGAC
  hgvsp: ENSP00000466604.1:p.Arg9HisfsTer7
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.229_232delAGAC
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.325_328delAGAC
  hgvsp: ENSP00000334592.5:p.Arg109HisfsTer7
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.160_163delAGAC
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 24128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg109HisfsTer7
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: GGTCT
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

11-14907364-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907364
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907364
    reference: chr 11
allele count: 1
allele frequency: 8.258320257659592e-6
allele num: 121090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.229A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.305A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.35A>G
  hgvsp: ENSP00000432087.2:p.Gln12Arg
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.35A>G
  hgvsp: ENSP00000465097.1:p.Gln12Arg
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.200A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.325A>G
  hgvsp: ENSP00000334592.5:p.Arg109Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.160A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.35A>G
  hgvsp: ENSP00000435484.1:p.Gln12Arg
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.24A>G
  hgvsp: ENSP00000466604.1:p.Arg9Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.35A>G
  hgvsp: ENSP00000466060.1:p.Gln12Arg
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg109Gly
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-14907366-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907366
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907366
    reference: chr 11
allele count: 1
allele frequency: 8.258320257659592e-6
allele num: 121090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.22A>G
  hgvsp: ENSP00000466604.1:p.Asp8Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.33A>G
  hgvsp: ENST00000532805.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.158A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.323A>G
  hgvsp: ENSP00000334592.5:p.Asp108Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.33A>G
  hgvsp: ENST00000532378.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.198A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.227A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.33A>G
  hgvsp: ENST00000534686.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.33A>G
  hgvsp: ENST00000530609.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.303A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp108Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-14907379-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907379
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907379
    reference: chr 11
allele count: 3
allele frequency: 2.477496077297878e-5
allele num: 121090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.290G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.20G>A
  hgvsp: ENSP00000465097.1:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.20G>A
  hgvsp: ENSP00000435484.1:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.20G>A
  hgvsp: ENSP00000466060.1:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.185G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.9G>A
  hgvsp: ENSP00000466604.1:p.Glu4Lys
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.310G>A
  hgvsp: ENSP00000334592.5:p.Glu104Lys
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.20G>A
  hgvsp: ENSP00000432087.2:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.214G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.145G>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6928
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu104Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

11-14907383-TTGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907383
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907380
    reference: chr 11
allele count: 2
allele frequency: 1.651636772041093e-5
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.283_285delTCA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.13_15delTCA
  hgvsp: ENSP00000435484.1:p.Ser5del
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.303_305delTCA
  hgvsp: ENSP00000334592.5:p.His101del
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.13_15delTCA
  hgvsp: ENSP00000466060.1:p.Ser5del
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.178_180delTCA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.2_4delTCA
  hgvsp: ENSP00000466604.1:p.Gln2del
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.13_15delTCA
  hgvsp: ENSP00000465097.1:p.Ser5del
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.138_140delTCA
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.13_15delTCA
  hgvsp: ENSP00000432087.2:p.Ser5del
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.207_209delTCA
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27570
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His101del
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: TTGA
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-14907387-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907387
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907387
    reference: chr 11
allele count: 1
allele frequency: 8.258320257659592e-6
allele num: 121090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.177A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.12A>G
  hgvsp: ENST00000532378.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.12A>G
  hgvsp: ENST00000532805.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.282A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.12A>G
  hgvsp: ENST00000534686.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.12A>G
  hgvsp: ENST00000530609.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.302A>G
  hgvsp: ENSP00000334592.5:p.His101Arg
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.137A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466604
  ensembl transcript: ENST00000525015
  gene symbol: CYP2R1
  hgvsc: ENST00000525015.1:c.1A>G
  hgvsp: ENST00000525015.1:c.1A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.206A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His101Arg
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

11-14907393-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907393
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907393
    reference: chr 11
allele count: 42
allele frequency: 3.468551797040169e-4
allele num: 121088
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.276T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.296T>C
  hgvsp: ENSP00000334592.5:p.Leu99Pro
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.6T>C
  hgvsp: ENST00000532805.1:c.6T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.6T>C
  hgvsp: ENST00000532378.1:c.6T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.131T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.200T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.171T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.6T>C
  hgvsp: ENST00000534686.1:c.6T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.6T>C
  hgvsp: ENST00000530609.1:c.6T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27614
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23911
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu99Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-14907399-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907399
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907399
    reference: chr 11
allele count: 2
allele frequency: 1.652018766933192e-5
allele num: 121064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.165A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-1A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-1A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.290A>G
  hgvsp: ENSP00000334592.5:p.Glu97Gly
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.125A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.270A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-1A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-1A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.194A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6926
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu97Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

11-14907405-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907405
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907405
    reference: chr 11
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.284T>C
  hgvsp: ENSP00000334592.5:p.Val95Ala
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.159T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.188T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.119T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.264T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-7T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-7T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-7T>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-7T>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48885
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val95Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-14907414-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907414
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907414
    reference: chr 11
allele count: 7
allele frequency: 5.784741504693905e-5
allele num: 121008
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.275A>G
  hgvsp: ENSP00000334592.5:p.Tyr92Cys
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-16A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.150A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.110A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-16A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-16A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-16A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.179A>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.255A>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48797
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr92Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff

11-14907417-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907417
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907417
    reference: chr 11
allele count: 4
allele frequency: 3.305839765946544e-5
allele num: 120998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.107G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.176G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.252G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.147G>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.272G>A
  hgvsp: ENSP00000334592.5:p.Gly91Asp
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly91Asp
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

11-14907424-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907424
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907424
    reference: chr 11
allele count: 4
allele frequency: 3.306495610627077e-5
allele num: 120974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.100C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.265C>T
  hgvsp: ENST00000334636.5:c.265C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.245C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.140C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-26C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.169C>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48833
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu89Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

11-14907435-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907435
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907435
    reference: chr 11
allele count: 5
allele frequency: 4.135307253328923e-5
allele num: 120910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.234C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.129C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.158C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-37C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.254C>T
  hgvsp: ENSP00000334592.5:p.Ser85Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-37C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.89C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-37C>T
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-37C>T
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48821
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser85Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

11-14907435-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907435
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907435
    reference: chr 11
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-37C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-37C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-37C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.234C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-37C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.89C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.254C>G
  hgvsp: ENSP00000334592.5:p.Ser85Ter
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.129C>G
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.158C>G
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser85Ter
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP

11-14907439-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907439
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907439
    reference: chr 11
allele count: 4
allele frequency: 3.309231100153879e-5
allele num: 120874
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-41A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.125A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.85A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.250A>C
  hgvsp: ENSP00000334592.5:p.Ile84Leu
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-41A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-41A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-41A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.230A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.154A>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23610
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile84Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

11-14907454-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907454
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907454
    reference: chr 11
allele count: 3
allele frequency: 2.489419965148121e-5
allele num: 120510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-56T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-56T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.235T>A
  hgvsp: ENSP00000334592.5:p.Leu79Ile
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.215T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-56T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.139T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.110T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.70T>A
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-56T>A
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48489
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu79Ile
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

11-14907457-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14907457
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 14907457
    reference: chr 11
allele count: 1
allele frequency: 8.321821480285606e-6
allele num: 120166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000466060
  ensembl transcript: ENST00000530609
  gene symbol: CYP2R1
  hgvsc: ENST00000530609.1:c.-59A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000432087
  ensembl transcript: ENST00000534686
  gene symbol: CYP2R1
  hgvsc: ENST00000534686.1:c.-59A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000465097
  ensembl transcript: ENST00000532805
  gene symbol: CYP2R1
  hgvsc: ENST00000532805.1:c.-59A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000435484
  ensembl transcript: ENST00000532378
  gene symbol: CYP2R1
  hgvsc: ENST00000532378.1:c.-59A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000529043
  gene symbol: CYP2R1
  hgvsc: ENST00000529043.1:n.212A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526489
  gene symbol: CYP2R1
  hgvsc: ENST00000526489.1:n.107A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000526276
  gene symbol: CYP2R1
  hgvsc: ENST00000526276.1:n.136A>C
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186104
  ensembl protein: ENSP00000334592
  ensembl transcript: ENST00000334636
  gene symbol: CYP2R1
  hgvsc: ENST00000334636.5:c.232A>C
  hgvsp: ENSP00000334592.5:p.Ser78Arg
  variant of: http://identifiers.org/hgnc/20580
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186104
  ensembl transcript: ENST00000532641
  gene symbol: CYP2R1
  hgvsc: ENST00000532641.1:n.67A>C
  variant of: http://identifiers.org/hgnc/20580
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27687
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser78Arg
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 422
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7875
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47688
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011322572874006e-5
allele num: 66416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.28e1

FS
type: SiteQuality
SIO_000300: 1.1247e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.578051e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.458e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.384e0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46929
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.842978252856616e-4
allele num: 16278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.45e-1

FS
type: SiteQuality
SIO_000300: 1.6028e1

VQSLOD
type: SiteQuality
SIO_000300: -2.104e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
SIO_000300: 1.567455e6

MQRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.2e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.91e-1

GenotypeQuality
all individuals: 7703
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 356
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.897e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.65e-1

DP
type: SiteQuality
SIO_000300: 1.562144e6

VQSLOD
type: SiteQuality
SIO_000300: -2.086e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.07e0

QD
type: SiteQuality
SIO_000300: 7.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-2

GenotypeQuality
all individuals: 420
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 170
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.318571759795966e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 1.551124e6

QD
type: SiteQuality
SIO_000300: 1.544e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.018e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 340
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7447
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.64456981664316e-4
allele num: 11344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 1.336e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.01e-1

FS
type: SiteQuality
SIO_000300: 6.226e0

MQRankSum
type: SiteQuality
SIO_000300: -2.85e-1

DP
type: SiteQuality
SIO_000300: 1.540526e6

GenotypeQuality
all individuals: 1006
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 264
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512493193780628e-5
allele num: 66116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.505e0

DP
type: SiteQuality
SIO_000300: 1.537883e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.073e1

QD
type: SiteQuality
SIO_000300: 4.96e0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.276e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.396e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e0

GenotypeQuality
all individuals: 384
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44384
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.478664192949907e-4
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.074959162683768e-5
allele num: 66116
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.882057716436638e-4
allele num: 15940
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.63e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 1.532921e6

GenotypeQuality
all individuals: 263
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7333
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512630464377553e-5
allele num: 66110
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 8.858000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -3.143e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.12e0

QD
type: SiteQuality
SIO_000300: 1.54e1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 1.532737e6

GenotypeQuality
all individuals: 1625
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7347
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513408801985592e-5
allele num: 66076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.861e0

VQSLOD
type: SiteQuality
SIO_000300: 7.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.292e0

MQRankSum
type: SiteQuality
SIO_000300: -3.41e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 1.943e0

DP
type: SiteQuality
SIO_000300: 1.527836e6

QD
type: SiteQuality
SIO_000300: 1.39e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

GenotypeQuality
all individuals: 1687
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.525605e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.844e0

FS
type: SiteQuality
SIO_000300: 2.218e0

VQSLOD
type: SiteQuality
SIO_000300: -8.002e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.256e0

QD
type: SiteQuality
SIO_000300: 1.068e1

GenotypeQuality
all individuals: 215
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
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variant carriers: 0

GenotypeQuality
all individuals: 44062
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variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
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variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7271
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 372
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.343567622430856e-5
allele num: 15764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.26e-1

DP
type: SiteQuality
SIO_000300: 1.524055e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.019e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

QD
type: SiteQuality
SIO_000300: 1.262e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 679
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
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variant carriers: 1

GenotypeQuality
all individuals: 204
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 716
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 9.75e1
variant carriers: 15

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65982
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.587931718936086e-3
allele num: 10076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.727e0

QD
type: SiteQuality
SIO_000300: 1.409e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.27e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

DP
type: SiteQuality
SIO_000300: 1.524208e6

GenotypeQuality
all individuals: 1724
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
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variant carriers: 0

GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 101
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GenotypeQuality
all individuals: 44910
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 596
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516714190377965e-5
allele num: 65932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.904e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.699e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 1.342e0

QD
type: SiteQuality
SIO_000300: 1.519e1

DP
type: SiteQuality
SIO_000300: 1.529272e6

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 50
bin: 1.75e1
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GenotypeQuality
all individuals: 331
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45559
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.265022137887413e-4
allele num: 15810
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

DP
type: SiteQuality
SIO_000300: 1.53277e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

FS
type: SiteQuality
SIO_000300: 2.264e0

QD
type: SiteQuality
SIO_000300: 1.165e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e0

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 103
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variant carriers: 0

GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 191
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GenotypeQuality
all individuals: 45896
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variant carriers: 0

GenotypeQuality
all individuals: 532
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GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 331
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GenotypeQuality
all individuals: 135
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GenotypeQuality
all individuals: 958
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variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517128379403465e-5
allele num: 65914
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.317119393556538e-5
allele num: 15830
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

FS
type: SiteQuality
SIO_000300: 2.097e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.294e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

DP
type: SiteQuality
SIO_000300: 1.535965e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15888
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.552490212146044e-5
allele num: 65898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQ
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SIO_000300: 5.931e1

MQRankSum
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ReadPosRankSum
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QD
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FS
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ClippingRankSum
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SIO_000300: -5.4e-1

DP
type: SiteQuality
SIO_000300: 1.536639e6

BaseQRankSum
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SIO_000300: 1.09e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.517865274278255e-5
allele num: 65882
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.25e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.262e1

FS
type: SiteQuality
SIO_000300: 1.124e0

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.537819e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e-1

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 138
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.07146109711302e-5
allele num: 65882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15920
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.262e1

DP
type: SiteQuality
SIO_000300: 1.537819e6

FS
type: SiteQuality
SIO_000300: 1.124e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.38e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.891e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.373e-1

FS
type: SiteQuality
SIO_000300: 9.06e-1

DP
type: SiteQuality
SIO_000300: 1.539237e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65798
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.273525721455458e-5
allele num: 15940
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.929e1

FS
type: SiteQuality
SIO_000300: 1.458e0

MQRankSum
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ReadPosRankSum
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SIO_000300: 3.19e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65770
num of homozygotes: 0

Other
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allele num: 898
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.76522506619594e-4
allele num: 11330
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6550
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.830801836806782e-5
allele num: 11324
num of homozygotes: 0

Other
type: Population
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African
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allele count: 1
allele frequency: 1.019575856443719e-4
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65736
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.522e1

MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.17283950617284e-5
allele num: 16200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
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QD
type: SiteQuality
SIO_000300: 7.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

DP
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ClippingRankSum
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SIO_000300: -1.466e0

InbreedingCoeff
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SIO_000300: -1.1e-3

MQRankSum
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SIO_000300: -5.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.167e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.169792694965449e-5
allele num: 16208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65500
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e-1

MQRankSum
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SIO_000300: 3.62e-1

ReadPosRankSum
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SIO_000300: 9.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

QD
type: SiteQuality
SIO_000300: 6.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.535822e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.863676653075696e-5
allele num: 11282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.13139581225666e-5
allele num: 65238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

BaseQRankSum
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SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 1.529146e6

QD
type: SiteQuality
SIO_000300: 1.114e1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 2.141e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53666482266888e-5
allele num: 65076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.524342e6

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

GenotypeQuality
all individuals: 95
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.580228184949907e-5
allele num: 63282
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9100
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

QD
type: SiteQuality
SIO_000300: 1.152e1

VQSLOD
type: SiteQuality
SIO_000300: 9.16e-1

MQRankSum
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FS
type: SiteQuality
SIO_000300: 3.708e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.404e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 1.473884e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 28

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 27
allele frequency: 3.107734806629834e-3
allele num: 8688
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.636607639684462e-5
allele num: 61102
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6382
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MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

BaseQRankSum
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
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QD
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InbreedingCoeff
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SIO_000300: -3.3e-3

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15770
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61120
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
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Latino
type: Population
allele count: 1
allele frequency: 9.124087591240875e-5
allele num: 10960
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8680
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FS
type: SiteQuality
SIO_000300: 3.058e0

MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
type: SiteQuality
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ClippingRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -1.463e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.655574318731168e-5
allele num: 60402
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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FS
type: SiteQuality
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VQSLOD
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DP
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MQ
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 4

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 694
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 222
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.281394156842645e-4
allele num: 7804
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.742790335151988e-5
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.409304002884962e-5
allele num: 55460
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.692877339437188e-4
allele num: 14854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.027926960257787e-4
allele num: 7448
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.444e0

FS
type: SiteQuality
SIO_000300: 9.228999999999999e0

QD
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

DP
type: SiteQuality
SIO_000300: 1.277095e6

VQSLOD
type: SiteQuality
SIO_000300: -1.594e0

GenotypeQuality
all individuals: 356
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 342
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.476232654266312e-4
allele num: 6774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.53e-1

FS
type: SiteQuality
SIO_000300: 1.157e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

DP
type: SiteQuality
SIO_000300: 1.03742e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

QD
type: SiteQuality
SIO_000300: 9.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 456
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 584
bin: 5.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.476232654266312e-4
allele num: 6774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.159658344283837e-5
allele num: 48704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.42673705236125e-4
allele num: 14018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9364
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

FS
type: SiteQuality
SIO_000300: 1.157e1

DP
type: SiteQuality
SIO_000300: 1.03742e6

QD
type: SiteQuality
SIO_000300: 9.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 736
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
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variant carriers: 0

GenotypeQuality
all individuals: 600
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variant carriers: 2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2467
bin: 3.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 159
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 208
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.287369475039336e-3
allele num: 13982
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 9.408602150537635e-3
allele num: 744
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 56
allele frequency: 1.00864553314121e-2
allele num: 5552
num of homozygotes: 2

African
type: Population
allele count: 12
allele frequency: 1.770956316410862e-3
allele num: 6776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6204
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.283147989734816e-3
allele num: 9352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 370
allele frequency: 7.617243792975666e-3
allele num: 48574
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.364e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.038259e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

VQSLOD
type: SiteQuality
SIO_000300: 6.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

GenotypeQuality
all individuals: 170
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3099
bin: 7.5e0
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GenotypeQuality
all individuals: 270
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25112
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GenotypeQuality
all individuals: 55
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variant carriers: 1

GenotypeQuality
all individuals: 2464
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GenotypeQuality
all individuals: 69
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GenotypeQuality
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GenotypeQuality
all individuals: 222
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GenotypeQuality
all individuals: 308
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GenotypeQuality
all individuals: 126
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GenotypeQuality
all individuals: 676
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 729
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variant carriers: 0

GenotypeQuality
all individuals: 2907
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.475361463558572e-4
allele num: 6778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.061345646437995e-5
allele num: 48512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14004
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.19e0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

DP
type: SiteQuality
SIO_000300: 1.029262e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 435
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4870
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variant carriers: 0

GenotypeQuality
all individuals: 460
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GenotypeQuality
all individuals: 281
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GenotypeQuality
all individuals: 675
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 53
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.486572508454347e-5
allele num: 40216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12868
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.98645e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.445e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.32e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.02e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

GenotypeQuality
all individuals: 546
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 528
bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 7.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.106469897359955e-5
allele num: 39166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4486
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

DP
type: SiteQuality
SIO_000300: 7.80712e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.879e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.41e-2

QD
type: SiteQuality
SIO_000300: 3.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

GenotypeQuality
all individuals: 3012
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 258
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GenotypeQuality
all individuals: 138
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GenotypeQuality
all individuals: 3359
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 716
bin: 9.75e1
variant carriers: 45

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 21
allele frequency: 4.677060133630289e-3
allele num: 4490
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.736111111111111e-3
allele num: 576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 6.982816200133584e-4
allele num: 32938
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.93753e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.94e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

QD
type: SiteQuality
SIO_000300: 1.489e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 3.465003465003465e-4
allele num: 2886
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 4246
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.31e-2

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66056
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.811616954474098e-5
allele num: 10192
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

BaseQRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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DP
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InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66062
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Latino
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allele num: 11310
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
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South Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.527103e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.715e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.487561032318065e-4
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.62e-1

DP
type: SiteQuality
SIO_000300: 1.534757e6

QD
type: SiteQuality
SIO_000300: 1.044e1

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

FS
type: SiteQuality
SIO_000300: 4.983e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.771350400625366e-5
allele num: 10234
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.022061045633122e-5
allele num: 66180
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
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allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509115054931788e-5
allele num: 66264
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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Other
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East Asian
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allele frequency: 0.0e0
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African
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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MQ
type: SiteQuality
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VQSLOD
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QD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
type: Population
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.506614035616356e-5
allele num: 66374
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East Asian
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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European (Non-Finnish)
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South Asian
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African
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Latino
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European (Finnish)
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ReadPosRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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QD
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MQ
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.24e-1

GenotypeQuality
all individuals: 1426
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 6888
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
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GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48580
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505026789476853e-5
allele num: 66444
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.111e1

QD
type: SiteQuality
SIO_000300: 1.266e1

MQRankSum
type: SiteQuality
SIO_000300: 2.38e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

FS
type: SiteQuality
SIO_000300: 7.961e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.567418e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 220
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66488
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.754385964912281e-4
allele num: 11400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.04e-1

QD
type: SiteQuality
SIO_000300: 1.016e1

DP
type: SiteQuality
SIO_000300: 1.569183e6

GenotypeQuality
all individuals: 1431
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 6905
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.599e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-1

QD
type: SiteQuality
SIO_000300: 1.16e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.569822e6

GenotypeDepth
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48803
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6905
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
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variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
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variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503533303262667e-5
allele num: 66510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.298e0

QD
type: SiteQuality
SIO_000300: 8.35e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.692e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.82e-1

DP
type: SiteQuality
SIO_000300: 1.570259e6

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6936
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
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variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.894076789504148e-4
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.257e1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.97e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.61e-1

DP
type: SiteQuality
SIO_000300: 1.572745e6

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 609
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variant carriers: 1

GenotypeQuality
all individuals: 1358
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

FS
type: SiteQuality
SIO_000300: 1.362e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.57386e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.14e-1

QD
type: SiteQuality
SIO_000300: 1.238e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 608
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GenotypeQuality
all individuals: 172
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GenotypeQuality
all individuals: 48970
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.574171e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.48e-1

MQ
type: SiteQuality
SIO_000300: 5.854e1

FS
type: SiteQuality
SIO_000300: 9.999000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

QD
type: SiteQuality
SIO_000300: 8.380000000000001e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
all individuals: 183
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1356
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GenotypeQuality
all individuals: 221
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
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GenotypeQuality
all individuals: 1442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
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European (Non-Finnish)
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allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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QD
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FS
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DP
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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ClippingRankSum
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SIO_000300: 1.78e0

ReadPosRankSum
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SIO_000300: -9.64e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

African
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allele num: 10380
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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DP
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

South Asian
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num of homozygotes: 0

African
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Other
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allele num: 904
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Latino
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allele frequency: 1.748863238894718e-4
allele num: 11436
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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MQ
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SIO_000300: 5.97e1

FS
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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BaseQRankSum
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MQRankSum
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DP
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 1.748557440111908e-4
allele num: 11438
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.449e0

VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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QD
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BaseQRankSum
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SIO_000300: 1.22e0

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.0e-4

ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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Latino
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allele frequency: 8.742787200559538e-5
allele num: 11438
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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VQSLOD
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ReadPosRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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African
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allele frequency: 4.046242774566474e-3
allele num: 10380
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

MQRankSum
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ClippingRankSum
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FS
type: SiteQuality
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BaseQRankSum
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DP
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MQ
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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Other
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East Asian
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African
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South Asian
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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Other
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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DP
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.007449237053947e-5
allele num: 66584
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.627430373095113e-4
allele num: 11418
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.573352e6

ReadPosRankSum
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SIO_000300: 2.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

VQSLOD
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SIO_000300: 7.14e-1

ClippingRankSum
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SIO_000300: -3.28e-1

QD
type: SiteQuality
SIO_000300: 1.471e1

FS
type: SiteQuality
SIO_000300: 5.024e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.008532115604158e-5
allele num: 66572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.33e-1

InbreedingCoeff
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QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

MQRankSum
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SIO_000300: 1.21e0

VQSLOD
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SIO_000300: 2.09e-1

BaseQRankSum
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SIO_000300: -2.531e0

FS
type: SiteQuality
SIO_000300: 1.763e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-2

DP
type: SiteQuality
SIO_000300: 1.573142e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 4
allele frequency: 2.427184466019417e-4
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.752e0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.48e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

DP
type: SiteQuality
SIO_000300: 1.572941e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.517666516313337e-5
allele num: 66510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

DP
type: SiteQuality
SIO_000300: 1.572616e6

QD
type: SiteQuality
SIO_000300: 1.269e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 8.964e0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503533303262667e-5
allele num: 66510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

FS
type: SiteQuality
SIO_000300: 8.964e0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-2

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.269e1

DP
type: SiteQuality
SIO_000300: 1.572616e6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.016666165277819e-5
allele num: 66482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.164e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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DP
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.528028496392671e-5
allele num: 66254
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele count: 0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1