11-13375893-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375893
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375893
    reference: chr 11
allele count: 1
allele frequency: 9.263033087554189e-6
allele num: 107956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-163G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.38G>A
  hgvsp: ENSP00000374357.4:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.38G>A
  hgvsp: ENSP00000354278.4:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.38G>A
  hgvsp: ENSP00000433540.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.38G>A
  hgvsp: ENSP00000431488.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.38G>A
  hgvsp: ENSP00000374358.3:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.38G>A
  hgvsp: ENSP00000431566.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-156G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434044
  ensembl transcript: ENST00000529050
  gene symbol: ARNTL
  hgvsc: ENST00000529050.1:c.38G>A
  hgvsp: ENSP00000434044.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.340G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-163G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.38G>A
  hgvsp: ENSP00000379718.3:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.38G>A
  hgvsp: ENSP00000434781.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-184G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.38G>A
  hgvsp: ENSP00000384517.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.38G>A
  hgvsp: ENSP00000433571.1:p.Ser13Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.172G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-163G>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser13Asn
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-13375896-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375896
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375896
    reference: chr 11
allele count: 1
allele frequency: 9.055510278004166e-6
allele num: 110430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.41A>T
  hgvsp: ENSP00000354278.4:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.41A>T
  hgvsp: ENSP00000379718.3:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-160A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.41A>T
  hgvsp: ENSP00000433540.1:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.41A>T
  hgvsp: ENSP00000431488.1:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.41A>T
  hgvsp: ENSP00000374357.4:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.343A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-153A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.41A>T
  hgvsp: ENSP00000431566.1:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-160A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.41A>T
  hgvsp: ENSP00000374358.3:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434044
  ensembl transcript: ENST00000529050
  gene symbol: ARNTL
  hgvsc: ENST00000529050.1:c.41A>T
  hgvsp: ENSP00000434044.1:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.41A>T
  hgvsp: ENSP00000434781.1:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.41A>T
  hgvsp: ENSP00000433571.1:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.175A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-160A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-181A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.41A>T
  hgvsp: ENSP00000384517.1:p.Asp14Val
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp14Val
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

11-13375907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375907
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375907
    reference: chr 11
allele count: 1
allele frequency: 8.610594475442584e-6
allele num: 116136
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.354C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434044
  ensembl transcript: ENST00000529050
  gene symbol: ARNTL
  hgvsc: ENST00000529050.1:c.52C>T
  hgvsp: ENSP00000434044.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-149C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.186C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.52C>T
  hgvsp: ENSP00000379718.3:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-170C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.52C>T
  hgvsp: ENSP00000354278.4:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.52C>T
  hgvsp: ENSP00000433540.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.52C>T
  hgvsp: ENSP00000374357.4:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.52C>T
  hgvsp: ENSP00000431488.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.52C>T
  hgvsp: ENSP00000433571.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.52C>T
  hgvsp: ENSP00000384517.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.52C>T
  hgvsp: ENSP00000374358.3:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.52C>T
  hgvsp: ENSP00000434781.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-149C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-149C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.52C>T
  hgvsp: ENSP00000431566.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-142C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro18Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-13375908-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375908
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375908
    reference: chr 11
allele count: 2
allele frequency: 1.716031163125922e-5
allele num: 116548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.53C>T
  hgvsp: ENSP00000354278.4:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.355C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.53C>T
  hgvsp: ENSP00000434781.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-148C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-141C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.53C>T
  hgvsp: ENSP00000431488.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434044
  ensembl transcript: ENST00000529050
  gene symbol: ARNTL
  hgvsc: ENST00000529050.1:c.53C>T
  hgvsp: ENSP00000434044.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.53C>T
  hgvsp: ENSP00000374357.4:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.53C>T
  hgvsp: ENSP00000384517.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.53C>T
  hgvsp: ENSP00000374358.3:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-169C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.53C>T
  hgvsp: ENSP00000433540.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.53C>T
  hgvsp: ENSP00000379718.3:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.53C>T
  hgvsp: ENSP00000431566.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-148C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-148C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.53C>T
  hgvsp: ENSP00000433571.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.187C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro18Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-13375918-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375918
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375918
    reference: chr 11
allele count: 1
allele frequency: 8.381667616588997e-6
allele num: 119308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.63C>T
  hgvsp: ENST00000396441.3:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-131C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.63C>T
  hgvsp: ENST00000389707.4:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.63C>T
  hgvsp: ENST00000361003.4:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.63C>T
  hgvsp: ENST00000529388.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.63C>T
  hgvsp: ENST00000527998.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.197C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.63C>T
  hgvsp: ENST00000531665.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.63C>T
  hgvsp: ENST00000533520.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.63C>T
  hgvsp: ENST00000534544.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.63C>T
  hgvsp: ENST00000389708.3:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-159C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-138C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-138C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-138C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434044
  ensembl transcript: ENST00000529050
  gene symbol: ARNTL
  hgvsc: ENST00000529050.1:c.63C>T
  hgvsp: ENST00000529050.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.63C>T
  hgvsp: ENST00000403290.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.365C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr21Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

11-13375919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375919
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375919
    reference: chr 11
allele count: 117
allele frequency: 9.788665227649215e-4
allele num: 119526
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.64G>A
  hgvsp: ENSP00000374357.4:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-137G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.64G>A
  hgvsp: ENSP00000384517.1:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.64G>A
  hgvsp: ENSP00000431566.1:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.64G>A
  hgvsp: ENSP00000379718.3:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.64G>A
  hgvsp: ENSP00000374358.3:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.64G>A
  hgvsp: ENSP00000431488.1:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-130G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.64G>A
  hgvsp: ENSP00000354278.4:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.64G>A
  hgvsp: ENSP00000434781.1:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.366G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434044
  ensembl transcript: ENST00000529050
  gene symbol: ARNTL
  hgvsc: ENST00000529050.1:c.64G>A
  hgvsp: ENSP00000434044.1:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.64G>A
  hgvsp: ENSP00000433540.1:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-158G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.198G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-137G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-137G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.64G>A
  hgvsp: ENSP00000433571.1:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
hgvs: p.Asp22Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-13375921-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375921
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375921
    reference: chr 11
allele count: 1
allele frequency: 8.344180768332166e-6
allele num: 119844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-128C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.66C>T
  hgvsp: ENST00000531665.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-135C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434044
  ensembl transcript: ENST00000529050
  gene symbol: ARNTL
  hgvsc: ENST00000529050.1:c.66C>T
  hgvsp: ENST00000529050.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.368C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.66C>T
  hgvsp: ENST00000403290.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.66C>T
  hgvsp: ENST00000396441.3:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.66C>T
  hgvsp: ENST00000361003.4:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.66C>T
  hgvsp: ENST00000389708.3:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.66C>T
  hgvsp: ENST00000533520.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.66C>T
  hgvsp: ENST00000534544.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-135C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.200C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.66C>T
  hgvsp: ENST00000529388.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-135C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.66C>T
  hgvsp: ENST00000527998.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-156C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.66C>T
  hgvsp: ENST00000389707.4:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp22Asp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

11-13375952-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375952
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375952
    reference: chr 11
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.399G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-97G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-104G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.97G>A
  hgvsp: ENSP00000433571.1:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.231G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.97G>A
  hgvsp: ENSP00000374357.4:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.97G>A
  hgvsp: ENSP00000434781.1:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-104G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.97G>A
  hgvsp: ENSP00000354278.4:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-104G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.97G>A
  hgvsp: ENSP00000431566.1:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-125G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.97G>A
  hgvsp: ENSP00000374358.3:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.97G>A
  hgvsp: ENSP00000384517.1:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.97G>A
  hgvsp: ENSP00000433540.1:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.97G>A
  hgvsp: ENSP00000379718.3:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.97G>A
  hgvsp: ENSP00000431488.1:p.Val33Met
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val33Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

11-13375964-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375964
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375964
    reference: chr 11
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.109C>G
  hgvsp: ENSP00000384517.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.243C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.109C>G
  hgvsp: ENSP00000354278.4:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-113C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-85C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.109C>G
  hgvsp: ENSP00000433540.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.109C>G
  hgvsp: ENSP00000431566.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.109C>G
  hgvsp: ENSP00000374358.3:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.109C>G
  hgvsp: ENSP00000434781.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.411C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-92C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.109C>G
  hgvsp: ENSP00000433571.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.109C>G
  hgvsp: ENSP00000374357.4:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-92C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-92C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.109C>G
  hgvsp: ENSP00000431488.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.109C>G
  hgvsp: ENSP00000379718.3:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg37Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

11-13375974-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375974
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375974
    reference: chr 11
allele count: 1
allele frequency: 8.297515723792297e-6
allele num: 120518
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-75A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-82A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-82A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.119A>G
  hgvsp: ENSP00000379718.3:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.119A>G
  hgvsp: ENSP00000384517.1:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.119A>G
  hgvsp: ENSP00000374358.3:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.253A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.119A>G
  hgvsp: ENSP00000431566.1:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.119A>G
  hgvsp: ENSP00000433571.1:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.421A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.119A>G
  hgvsp: ENSP00000354278.4:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.119A>G
  hgvsp: ENSP00000434781.1:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.119A>G
  hgvsp: ENSP00000431488.1:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-103A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.119A>G
  hgvsp: ENSP00000374357.4:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-82A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.119A>G
  hgvsp: ENSP00000433540.1:p.Lys40Arg
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys40Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

11-13375976-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375976
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375976
    reference: chr 11
allele count: 1
allele frequency: 8.305096006909839e-6
allele num: 120408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.121G>C
  hgvsp: ENSP00000379718.3:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-101G>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.121G>C
  hgvsp: ENSP00000434781.1:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-80G>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.121G>C
  hgvsp: ENSP00000431566.1:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.121G>C
  hgvsp: ENSP00000433540.1:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.121G>C
  hgvsp: ENSP00000374358.3:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-73G>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.255G>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.121G>C
  hgvsp: ENSP00000384517.1:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-80G>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.121G>C
  hgvsp: ENSP00000354278.4:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.121G>C
  hgvsp: ENSP00000433571.1:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.121G>C
  hgvsp: ENSP00000431488.1:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.121G>C
  hgvsp: ENSP00000374357.4:p.Gly41Arg
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-80G>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.423G>C
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12812
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly41Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

11-13375984-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375984
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375984
    reference: chr 11
allele count: 1
allele frequency: 8.34306691139663e-6
allele num: 119860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.129C>T
  hgvsp: ENST00000534544.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.263C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-65C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.431C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.129C>T
  hgvsp: ENST00000361003.4:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.129C>T
  hgvsp: ENST00000396441.3:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-93C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.129C>T
  hgvsp: ENST00000389707.4:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.129C>T
  hgvsp: ENST00000389708.3:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.129C>T
  hgvsp: ENST00000533520.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-72C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.129C>T
  hgvsp: ENST00000403290.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-72C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-72C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.129C>T
  hgvsp: ENST00000531665.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.129C>T
  hgvsp: ENST00000529388.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.129C>T
  hgvsp: ENST00000527998.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser43Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

11-13375988-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13375988
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13375988
    reference: chr 11
allele count: 2
allele frequency: 1.670815859384137e-5
allele num: 119702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-89G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-68G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.133G>A
  hgvsp: ENSP00000433540.1:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.133G>A
  hgvsp: ENSP00000434781.1:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-68G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.267G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.133G>A
  hgvsp: ENSP00000431488.1:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.133G>A
  hgvsp: ENSP00000354278.4:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.133G>A
  hgvsp: ENSP00000374357.4:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.133G>A
  hgvsp: ENSP00000431566.1:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-61G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.435G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-68G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.133G>A
  hgvsp: ENSP00000374358.3:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.133G>A
  hgvsp: ENSP00000379718.3:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.133G>A
  hgvsp: ENSP00000433571.1:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.133G>A
  hgvsp: ENSP00000384517.1:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp45Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

11-13376002-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376002
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376002
    reference: chr 11
allele count: 1
allele frequency: 8.450228156160216e-6
allele num: 118340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-82+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-61+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-61+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-54+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.281C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-61+7C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+7C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.140+7C>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-13376005-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376005
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376005
    reference: chr 11
allele count: 47
allele frequency: 3.982780828418413e-4
allele num: 118008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-82+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-61+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-61+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-61+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.284T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-54+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+10T>C
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34622
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11401
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-13376007-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376007
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376007
    reference: chr 11
allele count: 1
allele frequency: 8.483922965979469e-6
allele num: 117870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.286G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-61+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-61+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-61+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-54+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-82+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+12G>T
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-13376011-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376011
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376011
    reference: chr 11
allele count: 1
allele frequency: 8.516001566944289e-6
allele num: 117426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-61+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-61+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.290C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-61+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-54+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+16C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-82+16C>A
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32536
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

11-13376012-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376012
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376012
    reference: chr 11
allele count: 1
allele frequency: 8.520790729379687e-6
allele num: 117360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-61+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-54+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.291A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-61+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-82+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+17A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-61+17A>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

11-13376022-CTTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376022
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376019
    reference: chr 11
allele count: 25
allele frequency: 2.15235209036435e-4
allele num: 116152
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-61+30_-61+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.304_306delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-54+30_-54+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-61+30_-61+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-61+30_-61+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+30_442+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-82+30_-82+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+30_140+32delGTT
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24472
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: CTTG
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

11-13376046-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376046
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376046
    reference: chr 11
allele count: 1
allele frequency: 8.98069151324652e-6
allele num: 111350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000485918
  gene symbol: ARNTL
  hgvsc: ENST00000485918.2:n.325C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-61+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-61+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-61+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-82+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-54+51C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+51C>T
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16822
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/11-13376795-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376795
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376795
    reference: chr 11
allele count: 1
allele frequency: 8.29737802854298e-6
allele num: 120520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-38C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-38C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-38C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-38C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-38C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+800C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+800C>A
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-13376799-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376799
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376799
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 120512
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-34A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-34A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-34A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-34A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-34A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+804A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+804A>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

11-13376807-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376807
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376807
    reference: chr 11
allele count: 2
allele frequency: 1.66096402351925e-5
allele num: 120412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-26A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-26A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-26A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-26A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-26A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+812A>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

11-13376808-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376808
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376808
    reference: chr 11
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+813G>A
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

11-13376808-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376808
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376808
    reference: chr 11
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-25G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-25G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-25G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-25G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-25G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+813G>T
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

11-13376810-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376810
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376810
    reference: chr 11
allele count: 1
allele frequency: 8.298755186721992e-6
allele num: 120500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-23T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-23T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-23T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-23T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-23T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+815T>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-13376811-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376811
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376811
    reference: chr 11
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-22C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+816C>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

11-13376818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376818
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376818
    reference: chr 11
allele count: 1
allele frequency: 8.29655195300833e-6
allele num: 120532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+823C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+823C>T
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

11-13376827-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376827
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376827
    reference: chr 11
allele count: 1
allele frequency: 8.296276631047985e-6
allele num: 120536
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.-6G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+832G>A
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7803
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-13376833-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376833
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376833
    reference: chr 11
allele count: 1
allele frequency: 8.29531314807134e-6
allele num: 120550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.1A>T
  hgvsp: ENSP00000434263.1:p.Met1?
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.1A>T
  hgvsp: ENSP00000385915.1:p.Met1?
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.1A>T
  hgvsp: ENSP00000436721.1:p.Met1?
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.1A>T
  hgvsp: ENSP00000436313.1:p.Met1?
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.1A>T
  hgvsp: ENSP00000385581.3:p.Met1?
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+838A>T
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

11-13376836-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376836
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376836
    reference: chr 11
allele count: 5
allele frequency: 4.147381343419765e-5
allele num: 120558
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.4A>G
  hgvsp: ENSP00000436313.1:p.Ile2Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.4A>G
  hgvsp: ENSP00000434263.1:p.Ile2Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.4A>G
  hgvsp: ENSP00000436721.1:p.Ile2Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.4A>G
  hgvsp: ENSP00000385915.1:p.Ile2Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.4A>G
  hgvsp: ENSP00000385581.3:p.Ile2Val
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+841A>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile2Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

11-13376837-TTAATATG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376837
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376830
    reference: chr 11
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.9_11+4delTATGTAA
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.9_11+4delTATGTAA
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.9_11+4delTATGTAA
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.9_11+4delTATGTAA
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.9_11+4delTATGTAA
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.9_11+4delTATGTAA
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: TTAATATG
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-13376839-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376839
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376839
    reference: chr 11
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.7A>G
  hgvsp: ENSP00000434263.1:p.Asn3Asp
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.7A>G
  hgvsp: ENSP00000436313.1:p.Asn3Asp
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.7A>G
  hgvsp: ENSP00000436721.1:p.Asn3Asp
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.7A>G
  hgvsp: ENSP00000385581.3:p.Asn3Asp
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.7A>G
  hgvsp: ENSP00000385915.1:p.Asn3Asp
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+844A>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn3Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

11-13376843-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376843
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376843
    reference: chr 11
allele count: 1
allele frequency: 8.295175525914129e-6
allele num: 120552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.11T>A
  hgvsp: ENSP00000385581.3:p.Ile4Lys
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.11T>A
  hgvsp: ENSP00000434263.1:p.Ile4Lys
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.11T>A
  hgvsp: ENSP00000385915.1:p.Ile4Lys
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.11T>A
  hgvsp: ENSP00000436721.1:p.Ile4Lys
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.11T>A
  hgvsp: ENSP00000436313.1:p.Ile4Lys
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+848T>A
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile4Lys
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

11-13376857-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376857
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376857
    reference: chr 11
allele count: 1
allele frequency: 8.29393713195654e-6
allele num: 120570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.11+14G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.11+14G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.11+14G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.11+14G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.11+14G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+862G>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+862G>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

11-13376860-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376860
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376860
    reference: chr 11
allele count: 1
allele frequency: 8.293799555452344e-6
allele num: 120572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.11+17G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.11+17G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.11+17G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.11+17G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.11+17G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+865G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+865G>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

11-13376888-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13376888
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13376888
    reference: chr 11
allele count: 1
allele frequency: 8.2917364554485e-6
allele num: 120602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.11+45G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.11+45G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.11+45G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.11+45G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.442+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.11+45G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.140+893G>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

11-13377798-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377798
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377798
    reference: chr 11
allele count: 15
allele frequency: 9.206972747360667e-4
allele num: 16292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-804T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-488T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-488T>C
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

11-13377803-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377803
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377803
    reference: chr 11
allele count: 1
allele frequency: 6.144015728680265e-5
allele num: 16276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-799G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-483G>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
reference allele: G
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

11-13377829-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377829
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377829
    reference: chr 11
allele count: 1
allele frequency: 6.135722174499939e-5
allele num: 16298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-773C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-457C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

11-13377830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377830
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377830
    reference: chr 11
allele count: 2
allele frequency: 1.227596366314756e-4
allele num: 16292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-772G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-456G>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

11-13377843-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377843
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377843
    reference: chr 11
allele count: 1
allele frequency: 6.147792942333702e-5
allele num: 16266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-759C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-443C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

11-13377846-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377846
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377846
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 16258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-756A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-440A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-440A>G
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

11-13377857-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377857
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377857
    reference: chr 11
allele count: 372
allele frequency: 2.290358330254895e-2
allele num: 16242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-745T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-429T>C
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 10
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ

11-13377857-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377857
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377857
    reference: chr 11
allele count: 3
allele frequency: 1.847063169560399e-4
allele num: 16242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-745T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-429T>G
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

11-13377870-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377870
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377870
    reference: chr 11
allele count: 1
allele frequency: 6.167509559639817e-5
allele num: 16214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-732T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-416T>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-416T>G
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

11-13377876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13377876
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13377876
    reference: chr 11
allele count: 1
allele frequency: 6.1667488899852e-5
allele num: 16216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-726C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-410C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-410C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/11-13378238-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378238
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378238
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 118500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-364C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-48C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-48C>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

11-13378240-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378240
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378240
    reference: chr 11
allele count: 1
allele frequency: 8.440528039434147e-6
allele num: 118476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-362G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-46G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-46G>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9023
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ

11-13378251-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378251
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378251
    reference: chr 11
allele count: 1
allele frequency: 8.409580193756727e-6
allele num: 118912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-351T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-35T>C
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6090
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

11-13378255-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378255
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378255
    reference: chr 11
allele count: 2
allele frequency: 1.679091947075022e-5
allele num: 119112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-347C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-31C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 1
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

11-13378261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378261
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378261
    reference: chr 11
allele count: 1
allele frequency: 8.359246999030327e-6
allele num: 119628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-341G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-25G>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

11-13378266-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378266
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378266
    reference: chr 11
allele count: 1
allele frequency: 8.330834083108401e-6
allele num: 120036
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-336A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-20A>G
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

11-13378271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378271
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378271
    reference: chr 11
allele count: 1
allele frequency: 8.312137383006666e-6
allele num: 120306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-331C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-15C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-15C>T
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6468
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26670
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

11-13378273-TTTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378273
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378270
    reference: chr 11
allele count: 2
allele frequency: 1.661129568106312e-5
allele num: 120400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.12-10_12-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.12-10_12-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.12-10_12-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.12-10_12-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.12-10_12-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-326_141-324delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.443-10_443-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.141-10_141-8delGTT
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: TTTG
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

11-13378291-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378291
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378291
    reference: chr 11
allele count: 1
allele frequency: 8.265555775970376e-6
allele num: 120984
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.146G>C
  hgvsp: ENSP00000431566.1:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.146G>C
  hgvsp: ENSP00000433540.1:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.448G>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.146G>C
  hgvsp: ENSP00000379718.3:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.17G>C
  hgvsp: ENSP00000434263.1:p.Ser6Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.17G>C
  hgvsp: ENSP00000436313.1:p.Ser6Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.146G>C
  hgvsp: ENSP00000433571.1:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.146G>C
  hgvsp: ENSP00000374357.4:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.17G>C
  hgvsp: ENSP00000436721.1:p.Ser6Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.17G>C
  hgvsp: ENSP00000385915.1:p.Ser6Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.17G>C
  hgvsp: ENSP00000385581.3:p.Ser6Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.146G>C
  hgvsp: ENSP00000384517.1:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.146G>C
  hgvsp: ENSP00000354278.4:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.146G>C
  hgvsp: ENSP00000374358.3:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.146G>C
  hgvsp: ENSP00000431488.1:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-311G>C
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser49Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/11-13378314-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378314
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378314
    reference: chr 11
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-288C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.169C>A
  hgvsp: ENSP00000384517.1:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.40C>A
  hgvsp: ENSP00000385581.3:p.Pro14Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.40C>A
  hgvsp: ENSP00000436721.1:p.Pro14Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.169C>A
  hgvsp: ENSP00000433540.1:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.40C>A
  hgvsp: ENSP00000385915.1:p.Pro14Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.169C>A
  hgvsp: ENSP00000374357.4:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.40C>A
  hgvsp: ENSP00000436313.1:p.Pro14Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.169C>A
  hgvsp: ENSP00000431566.1:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.169C>A
  hgvsp: ENSP00000379718.3:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.169C>A
  hgvsp: ENSP00000374358.3:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.169C>A
  hgvsp: ENSP00000433571.1:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.40C>A
  hgvsp: ENSP00000434263.1:p.Pro14Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.169C>A
  hgvsp: ENSP00000354278.4:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.169C>A
  hgvsp: ENSP00000431488.1:p.Pro57Thr
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.471C>A
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro57Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ

11-13378319-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378319
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378319
    reference: chr 11
allele count: 624
allele frequency: 5.153447193683724e-3
allele num: 121084
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.45T>C
  hgvsp: ENST00000482049.1:c.45T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.45T>C
  hgvsp: ENST00000530357.1:c.45T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.174T>C
  hgvsp: ENST00000403290.1:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-283T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.174T>C
  hgvsp: ENST00000389707.4:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.45T>C
  hgvsp: ENST00000403510.3:c.45T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.45T>C
  hgvsp: ENST00000529825.1:c.45T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.174T>C
  hgvsp: ENST00000396441.3:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.45T>C
  hgvsp: ENST00000401424.1:c.45T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.174T>C
  hgvsp: ENST00000389708.3:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.174T>C
  hgvsp: ENST00000361003.4:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.174T>C
  hgvsp: ENST00000529388.1:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.476T>C
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.174T>C
  hgvsp: ENST00000533520.1:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431566
  ensembl transcript: ENST00000534544
  gene symbol: ARNTL
  hgvsc: ENST00000534544.1:c.174T>C
  hgvsp: ENST00000534544.1:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.174T>C
  hgvsp: ENST00000527998.1:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/701
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
hgvs: p.His58His
num of homozygotes: 13
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum

11-13378352-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378352
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378352
    reference: chr 11
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.179+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-250C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.179+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.179+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.179+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.509C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.179+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.179+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.50+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.50+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.179+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.50+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.50+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.179+28C>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.50+28C>T
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

11-13378353-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378353
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378353
    reference: chr 11
allele count: 8
allele frequency: 6.621968380100984e-5
allele num: 120810
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.179+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.179+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.179+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.50+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.179+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.50+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.50+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.179+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-249A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.510A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.179+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.50+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.179+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.50+29A>T
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.179+29A>T
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15076
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

11-13378358-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378358
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378358
    reference: chr 11
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.50+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.50+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.50+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.179+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.179+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.179+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.179+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.179+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.515C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-244C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.50+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.50+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.179+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.179+34C>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.179+34C>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14573
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6680
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

11-13378362-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378362
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378362
    reference: chr 11
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.50+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.519A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.179+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.179+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-240A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.50+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.50+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.50+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.179+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.179+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.179+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.50+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.179+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.179+38A>G
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.179+38A>G
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-13378367-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378367
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378367
    reference: chr 11
allele count: 1
allele frequency: 8.29737802854298e-6
allele num: 120520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000354278
  ensembl transcript: ENST00000361003
  gene symbol: ARNTL
  hgvsc: ENST00000361003.4:c.179+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374357
  ensembl transcript: ENST00000389707
  gene symbol: ARNTL
  hgvsc: ENST00000389707.4:c.179+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000379718
  ensembl transcript: ENST00000396441
  gene symbol: ARNTL
  hgvsc: ENST00000396441.3:c.179+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000374358
  ensembl transcript: ENST00000389708
  gene symbol: ARNTL
  hgvsc: ENST00000389708.3:c.179+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436721
  ensembl transcript: ENST00000482049
  gene symbol: ARNTL
  hgvsc: ENST00000482049.1:c.50+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000431488
  ensembl transcript: ENST00000533520
  gene symbol: ARNTL
  hgvsc: ENST00000533520.1:c.179+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433571
  ensembl transcript: ENST00000529388
  gene symbol: ARNTL
  hgvsc: ENST00000529388.1:c.179+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000384517
  ensembl transcript: ENST00000403290
  gene symbol: ARNTL
  hgvsc: ENST00000403290.1:c.179+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434781
  ensembl transcript: ENST00000531665
  gene symbol: ARNTL
  hgvsc: ENST00000531665.1:c.141-235C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000434263
  ensembl transcript: ENST00000529825
  gene symbol: ARNTL
  hgvsc: ENST00000529825.1:c.50+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000436313
  ensembl transcript: ENST00000530357
  gene symbol: ARNTL
  hgvsc: ENST00000530357.1:c.50+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000133794
  ensembl transcript: ENST00000480685
  gene symbol: ARNTL
  hgvsc: ENST00000480685.1:n.524C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000433540
  ensembl transcript: ENST00000527998
  gene symbol: ARNTL
  hgvsc: ENST00000527998.1:c.179+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385915
  ensembl transcript: ENST00000401424
  gene symbol: ARNTL
  hgvsc: ENST00000401424.1:c.50+43C>A
  variant of: http://identifiers.org/hgnc/701
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133794
  ensembl protein: ENSP00000385581
  ensembl transcript: ENST00000403510
  gene symbol: ARNTL
  hgvsc: ENST00000403510.3:c.50+43C>A
  variant of: http://identifiers.org/hgnc/701
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6522
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-13378370-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13378370
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 13378370
allele count: 1
allele frequency: 8.300683976359652e-6
allele num: 120472
alternate allele: C
canonical: false
consequence: non coding transcript exon
filter: PASS
num of homozygotes: 0
reference allele: T

GenotypeDepth
all individuals: 1524
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 36725
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 193
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 748
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 296
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3017
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6605
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 726
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9219
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6770
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 230
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3555
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.683558368968652e-5
allele num: 59398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9350
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.365172e6

FS
type: SiteQuality
SIO_000300: 1.412e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.899e0

VQSLOD
type: SiteQuality
SIO_000300: -3.398e0

QD
type: SiteQuality
SIO_000300: 3.285e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

GenotypeDepth
all individuals: 1279
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 296
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5407
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3055
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37865
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 193
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 575
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5571
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 407
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9524
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.858710562414266e-5
allele num: 14580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5800
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.388876e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

VQSLOD
type: SiteQuality
SIO_000300: 4.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeDepth
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2601
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 623
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 192
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 316
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40178
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 350
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 767
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47409
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3920
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 936
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.552221202987813e-5
allele num: 15262
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-2

MQ
type: SiteQuality
SIO_000300: 5.9e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.907e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.446782e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeDepth
all individuals: 300
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 490
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2358
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 794
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 236
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 302
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 580
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11153
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40148
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 353
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 8.986340762041697e-5
allele num: 11128
num of homozygotes: 0

African
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allele frequency: 1.008471157724889e-4
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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num of homozygotes: 0

DP
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MQ
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QD
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BaseQRankSum
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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SIO_000300: -3.0e-4

ReadPosRankSum
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SIO_000300: 7.38e-1

ClippingRankSum
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SIO_000300: 5.0e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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South Asian
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African
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InbreedingCoeff
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DP
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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variant carriers: 7

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.289308176100629e-5
allele num: 15900
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.753463089601964e-4
allele num: 11406
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African
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allele count: 113
allele frequency: 1.108060404000785e-2
allele num: 10198
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66042
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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SIO_000300: 9.2e-2

FS
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SIO_000300: 0.0e0

DP
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SIO_000300: 1.486337e6

BaseQRankSum
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InbreedingCoeff
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SIO_000300: -1.3e-3

MQ
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SIO_000300: 5.969e1

ClippingRankSum
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SIO_000300: -4.34e-1

VQSLOD
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QD
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SIO_000300: 1.335e1

ReadPosRankSum
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SIO_000300: 6.02e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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African
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East Asian
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allele num: 8614
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Latino
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QD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

African
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Latino
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East Asian
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European (Finnish)
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South Asian
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Other
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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VQSLOD
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
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allele num: 66550
num of homozygotes: 0

Latino
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European (Finnish)
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East Asian
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South Asian
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African
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Other
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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MQ
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
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DP
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SIO_000300: 1.495925e6

QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Other
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East Asian
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Latino
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European (Finnish)
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South Asian
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BaseQRankSum
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VQSLOD
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DP
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MQ
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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VQSLOD
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SIO_000300: -5.439000000000001e-1

ReadPosRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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DP
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FS
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MQRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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FS
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MQ
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ReadPosRankSum
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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South Asian
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East Asian
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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QD
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VQSLOD
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MQ
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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FS
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 6.441520198766909e-4
allele num: 65202
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African
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allele num: 10052
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.773049645390071e-4
allele num: 11280
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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Other
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Latino
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East Asian
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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FS
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

East Asian
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Other
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 64894
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
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VQSLOD
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SIO_000300: -1.864e0

BaseQRankSum
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MQ
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ClippingRankSum
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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SIO_000300: 1.377845e6

QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.542257865515114e-5
allele num: 64840
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FS
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BaseQRankSum
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MQ
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VQSLOD
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QD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Latino
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African
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South Asian
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Other
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ClippingRankSum
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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Other
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ReadPosRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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MQ
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DP
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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QD
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DP
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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allele frequency: 0.0e0
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Latino
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66566
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Other
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South Asian
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East Asian
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European (Finnish)
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African
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Latino
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FS
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DP
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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QD
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DP
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FS
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ReadPosRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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QD
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InbreedingCoeff
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DP
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MQRankSum
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MQ
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FS
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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East Asian
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MQ
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

FS
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MQ
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SIO_000300: 6.0e1

VQSLOD
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ClippingRankSum
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SIO_000300: -7.12e-1

QD
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InbreedingCoeff
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SIO_000300: 8.6e-3

ReadPosRankSum
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SIO_000300: 1.69e0

DP
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SIO_000300: 2.811248e6

MQRankSum
type: SiteQuality
SIO_000300: -7.82e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.175e0

ClippingRankSum
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SIO_000300: 3.04e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
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VQSLOD
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DP
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SIO_000300: 2.812893e6

BaseQRankSum
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SIO_000300: -2.014e0

ReadPosRankSum
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SIO_000300: -1.73e-1

QD
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SIO_000300: 1.099e1

InbreedingCoeff
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SIO_000300: 8.800000000000001e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.87e-1

ClippingRankSum
type: SiteQuality
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QD
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FS
type: SiteQuality
SIO_000300: 7.884e0

VQSLOD
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SIO_000300: -1.875e0

InbreedingCoeff
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SIO_000300: 8.1e-3

DP
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SIO_000300: 2.813836e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: -2.16e-1

BaseQRankSum
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SIO_000300: -1.677e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.024590163934426e-4
allele num: 9760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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SIO_000300: 5.966e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 3.032876379958753e-4
allele num: 16486
num of homozygotes: 0

African
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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VQSLOD
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SIO_000300: 1.62e0

FS
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MQ
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MQRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500015000150001e-5
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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FS
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MQ
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DP
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.024380249948781e-4
allele num: 9762
num of homozygotes: 0

BaseQRankSum
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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FS
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SIO_000300: 2.175e0

InbreedingCoeff
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16488
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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DP
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66670
num of homozygotes: 0

East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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FS
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SIO_000300: 2.848e0

ReadPosRankSum
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MQ
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SIO_000300: 5.866e1

InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -2.46e-1

VQSLOD
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: 5.96e-1

VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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QD
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DP
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BaseQRankSum
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MQ
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SIO_000300: 5.919e1

InbreedingCoeff
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SIO_000300: 3.4e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66692
num of homozygotes: 0

African
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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MQ
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FS
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ClippingRankSum
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DP
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 2
allele frequency: 2.626740215392698e-4
allele num: 7614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.881821603312006e-3
allele num: 5314
num of homozygotes: 0

Other
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allele count: 0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 3
allele frequency: 1.714285714285714e-3
allele num: 1750
num of homozygotes: 0

African
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allele count: 0
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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QD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.40512e5

MQ
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5302
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.313370107696349e-4
allele num: 7614
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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DP
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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SIO_000300: -3.28e-2

MQ
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 1752
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 1.312335958005249e-4
allele num: 7620
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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Other
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num of homozygotes: 0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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SIO_000300: -1.331e0

ReadPosRankSum
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SIO_000300: 1.25e0

MQ
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SIO_000300: 5.971e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 2.624671916010499e-4
allele num: 7620
num of homozygotes: 0

East Asian
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allele count: 0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 1.42e0

ClippingRankSum
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DP
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VQSLOD
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FS
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InbreedingCoeff
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SIO_000300: -2.57e-2

MQRankSum
type: SiteQuality
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QD
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MQ
type: SiteQuality
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 1.312335958005249e-4
allele num: 7620
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.611e0

InbreedingCoeff
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SIO_000300: -2.45e-2

ClippingRankSum
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QD
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MQRankSum
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FS
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DP
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ReadPosRankSum
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SIO_000300: -1.258e0

MQ
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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East Asian
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Other
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African
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Latino
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South Asian
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
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MQ
type: SiteQuality
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VQSLOD
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DP
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 39

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 8.064516129032258e-3
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num of homozygotes: 0

South Asian
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African
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Other
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allele num: 202
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European (Finnish)
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allele count: 42
allele frequency: 2.405498281786942e-2
allele num: 1746
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 204
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European (Non-Finnish)
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allele count: 83
allele frequency: 1.574952561669829e-2
allele num: 5270
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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FS
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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Latino
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African
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East Asian
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European (Finnish)
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DP
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MQ
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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Latino
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African
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East Asian
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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Latino
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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SIO_000300: -1.423e0

QD
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VQSLOD
type: SiteQuality
SIO_000300: -9.043e-1

DP
type: SiteQuality
SIO_000300: 1.847183e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.940993788819876e-4
allele num: 10304
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65202
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.892e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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SIO_000300: 2.497e1

DP
type: SiteQuality
SIO_000300: 1.867551e6

VQSLOD
type: SiteQuality
SIO_000300: 1.3e-2

InbreedingCoeff
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SIO_000300: 2.63e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.52545992616774e-5
allele num: 65554
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.893333e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
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SIO_000300: 1.16e0

BaseQRankSum
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SIO_000300: -6.891e0

ReadPosRankSum
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SIO_000300: 8.6e-1

FS
type: SiteQuality
SIO_000300: 3.084e0

QD
type: SiteQuality
SIO_000300: 1.275e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 1.985e0

DP
type: SiteQuality
SIO_000300: 1.905992e6

VQSLOD
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.514554872323024e-5
allele num: 66026
num of homozygotes: 0

Other
type: Population
allele count: 0
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African
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Latino
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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QD
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FS
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MQ
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele count: 0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.026268006294638e-5
allele num: 66088
num of homozygotes: 0

Other
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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QD
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MQRankSum
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
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South Asian
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele count: 0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.503940323647958e-5
allele num: 66492
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FS
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.929144e6

GenotypeDepth
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
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variant carriers: 0

GenotypeDepth
all individuals: 1907
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variant carriers: 0

GenotypeDepth
all individuals: 276
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variant carriers: 0

GenotypeDepth
all individuals: 26795
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variant carriers: 0

GenotypeDepth
all individuals: 1215
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variant carriers: 0

GenotypeDepth
all individuals: 1731
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variant carriers: 0

GenotypeDepth
all individuals: 172
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GenotypeDepth
all individuals: 241
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variant carriers: 0

GenotypeDepth
all individuals: 530
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GenotypeDepth
all individuals: 190
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variant carriers: 0

GenotypeDepth
all individuals: 978
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GenotypeQuality
all individuals: 264
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GenotypeQuality
all individuals: 6478
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 1110
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10287
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2382
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.142e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.931585e6

QD
type: SiteQuality
SIO_000300: 6.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.692e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

GenotypeDepth
all individuals: 604
bin: 6.25e1
variant carriers: 75

GenotypeDepth
all individuals: 449
bin: 6.75e1
variant carriers: 57

GenotypeDepth
all individuals: 1037
bin: 5.25e1
variant carriers: 66

GenotypeDepth
all individuals: 1276
bin: 4.75e1
variant carriers: 69

GenotypeDepth
all individuals: 6507
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variant carriers: 12

GenotypeDepth
all individuals: 114
bin: 1.75e1
variant carriers: 2

GenotypeDepth
all individuals: 15025
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variant carriers: 14

GenotypeDepth
all individuals: 198
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variant carriers: 14

GenotypeDepth
all individuals: 252
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variant carriers: 1

GenotypeDepth
all individuals: 826
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variant carriers: 88

GenotypeDepth
all individuals: 26418
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variant carriers: 5

GenotypeDepth
all individuals: 316
bin: 7.25e1
variant carriers: 39

GenotypeDepth
all individuals: 1758
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 32054
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variant carriers: 0

GenotypeQuality
all individuals: 289
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variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 10824
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variant carriers: 611

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6382
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 574
allele frequency: 4.967976458369396e-2
allele num: 11554
num of homozygotes: 12

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.885725278953444e-4
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 44
allele frequency: 5.117469178878809e-3
allele num: 8598
num of homozygotes: 1

South Asian
type: Population
allele count: 2
allele frequency: 1.213592233009709e-4
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.91e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.73e-1

DP
type: SiteQuality
SIO_000300: 1.951253e6

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.299e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

GenotypeDepth
all individuals: 1911
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 534
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variant carriers: 0

GenotypeDepth
all individuals: 1739
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variant carriers: 0

GenotypeDepth
all individuals: 6738
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variant carriers: 0

GenotypeDepth
all individuals: 244
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variant carriers: 0

GenotypeDepth
all individuals: 190
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variant carriers: 0

GenotypeDepth
all individuals: 3210
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variant carriers: 0

GenotypeDepth
all individuals: 277
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variant carriers: 0

GenotypeQuality
all individuals: 10285
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variant carriers: 1

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2356
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variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6126
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 1546
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
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variant carriers: 0

GenotypeQuality
all individuals: 1218
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 207
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 2477
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variant carriers: 0

GenotypeQuality
all individuals: 1101
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variant carriers: 0

GenotypeQuality
all individuals: 28005
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variant carriers: 0

GenotypeQuality
all individuals: 436
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variant carriers: 0

GenotypeQuality
all individuals: 1042
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variant carriers: 0

GenotypeQuality
all individuals: 429
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variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.745e0

VQSLOD
type: SiteQuality
SIO_000300: -5.288e-1

DP
type: SiteQuality
SIO_000300: 1.905468e6

QD
type: SiteQuality
SIO_000300: 1.17e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 259
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 184
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variant carriers: 0

GenotypeDepth
all individuals: 244
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variant carriers: 0

GenotypeDepth
all individuals: 22010
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variant carriers: 0

GenotypeDepth
all individuals: 190
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variant carriers: 0

GenotypeDepth
all individuals: 396
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 174
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 1283
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variant carriers: 0

GenotypeQuality
all individuals: 215
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variant carriers: 0

GenotypeQuality
all individuals: 1083
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 681
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 1301
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1546
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 2355
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variant carriers: 0

GenotypeQuality
all individuals: 496
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variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10291
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6121
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.93601525923357e-4
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

FS
type: SiteQuality
SIO_000300: 3.18e0

DP
type: SiteQuality
SIO_000300: 1.902138e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

QD
type: SiteQuality
SIO_000300: 1.236e1

GenotypeDepth
all individuals: 20252
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 977
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1219
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1909
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 534
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variant carriers: 0

GenotypeDepth
all individuals: 174
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variant carriers: 0

GenotypeDepth
all individuals: 3210
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1738
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variant carriers: 0

GenotypeQuality
all individuals: 342
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variant carriers: 0

GenotypeQuality
all individuals: 2452
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variant carriers: 0

GenotypeQuality
all individuals: 903
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variant carriers: 0

GenotypeQuality
all individuals: 1777
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 24838
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variant carriers: 0

GenotypeQuality
all individuals: 881
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variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6014
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variant carriers: 0

GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 577
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 2354
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10285
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3246
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variant carriers: 0

GenotypeQuality
all individuals: 1548
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variant carriers: 0

GenotypeQuality
all individuals: 1100
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variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.887243e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.026e0

QD
type: SiteQuality
SIO_000300: 1.26e1

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

FS
type: SiteQuality
SIO_000300: 6.466e0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

GenotypeDepth
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19272
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 977
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 741
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14125
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 534
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variant carriers: 0

GenotypeDepth
all individuals: 276
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variant carriers: 0

GenotypeQuality
all individuals: 22879
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
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variant carriers: 0

GenotypeQuality
all individuals: 2353
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10286
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1546
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5843
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3250
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.52e-1

DP
type: SiteQuality
SIO_000300: 1.876594e6

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 9.27e0

VQSLOD
type: SiteQuality
SIO_000300: 4.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

GenotypeDepth
all individuals: 245
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 534
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 978
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7055
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2855
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1539
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2245
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2406
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10287
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511030522816561e-5
allele num: 66180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.621e1

FS
type: SiteQuality
SIO_000300: 1.083e0

MQRankSum
type: SiteQuality
SIO_000300: -5.88e-1

DP
type: SiteQuality
SIO_000300: 1.867015e6

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.799e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.66e-1