8-77690415-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690415
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690415
    reference: chr 8
allele count: 1
allele frequency: 8.381246123673667e-6
allele num: 119314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3016-29T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3094-29T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3016-29T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3016-29T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.383-29T>C
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3422
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2724
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21136
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

8-77690417-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690417
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690417
    reference: chr 8
allele count: 147
allele frequency: 1.231423928158561e-3
allele num: 119374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3016-27T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3016-27T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3094-27T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3016-27T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.383-27T>C
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 14331
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 15618
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11435
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 6.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3412
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3952
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

8-77690419-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690419
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690419
    reference: chr 8
allele count: 1
allele frequency: 8.373806732540612e-6
allele num: 119420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3016-25C>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3016-25C>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3016-25C>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.383-25C>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3094-25C>G
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11485
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21304
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

8-77690419-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690419
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690419
    reference: chr 8
allele count: 3
allele frequency: 2.512142019762184e-5
allele num: 119420
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3094-25C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3016-25C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.383-25C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3016-25C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3016-25C>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21304
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12030
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3415
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7863
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

8-77690435-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690435
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690435
    reference: chr 8
allele count: 1
allele frequency: 8.333611120370679e-6
allele num: 119996
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3016-9T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3016-9T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3016-9T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.383-9T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3094-9T>C
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4976
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22205
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4016
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3476
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

8-77690462-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690462
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690462
    reference: chr 8
allele count: 2
allele frequency: 1.660798511924533e-5
allele num: 120424
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3112G>A
  hgvsp: ENSP00000430497.2:p.Gly1038Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3034G>A
  hgvsp: ENSP00000430848.1:p.Gly1012Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3034G>A
  hgvsp: ENSP00000399605.2:p.Gly1012Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3034G>A
  hgvsp: ENSP00000050961.6:p.Gly1012Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.401G>A
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22557
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4985
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly1038Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

8-77690468-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690468
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690468
    reference: chr 8
allele count: 2
allele frequency: 1.659943893896386e-5
allele num: 120486
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3118G>A
  hgvsp: ENSP00000430497.2:p.Val1040Met
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3040G>A
  hgvsp: ENSP00000430848.1:p.Val1014Met
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3040G>A
  hgvsp: ENSP00000399605.2:p.Val1014Met
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.407G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3040G>A
  hgvsp: ENSP00000050961.6:p.Val1014Met
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3499
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12084
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8094
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val1040Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

8-77690468-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690468
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690468
    reference: chr 8
allele count: 2
allele frequency: 1.659943893896386e-5
allele num: 120486
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3118G>C
  hgvsp: ENSP00000430497.2:p.Val1040Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3040G>C
  hgvsp: ENSP00000430848.1:p.Val1014Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.407G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3040G>C
  hgvsp: ENSP00000399605.2:p.Val1014Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3040G>C
  hgvsp: ENSP00000050961.6:p.Val1014Leu
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14868
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3499
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4993
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8094
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val1040Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

8-77690476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690476
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690476
    reference: chr 8
allele count: 1
allele frequency: 8.295175525914129e-6
allele num: 120552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.415C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3048C>T
  hgvsp: ENST00000050961.6:c.3048C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3048C>T
  hgvsp: ENST00000455469.2:c.3048C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3126C>T
  hgvsp: ENST00000521891.2:c.3126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3048C>T
  hgvsp: ENST00000518282.1:c.3048C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12085
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22620
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro1042Pro
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

8-77690477-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690477
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690477
    reference: chr 8
allele count: 2
allele frequency: 1.658842459731599e-5
allele num: 120566
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3127G>A
  hgvsp: ENSP00000430497.2:p.Glu1043Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.416G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3049G>A
  hgvsp: ENSP00000430848.1:p.Glu1017Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3049G>A
  hgvsp: ENSP00000050961.6:p.Glu1017Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3049G>A
  hgvsp: ENSP00000399605.2:p.Glu1017Lys
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4046
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3506
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu1043Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

8-77690483-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690483
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690483
    reference: chr 8
allele count: 3
allele frequency: 2.487479685582568e-5
allele num: 120604
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3055T>C
  hgvsp: ENSP00000399605.2:p.Cys1019Arg
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3055T>C
  hgvsp: ENSP00000430848.1:p.Cys1019Arg
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.422T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3133T>C
  hgvsp: ENSP00000430497.2:p.Cys1045Arg
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3055T>C
  hgvsp: ENSP00000050961.6:p.Cys1019Arg
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22658
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys1045Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

8-77690486-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690486
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690486
    reference: chr 8
allele count: 2
allele frequency: 1.65812731101494e-5
allele num: 120618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3058T>A
  hgvsp: ENSP00000430848.1:p.Tyr1020Asn
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.425T>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3136T>A
  hgvsp: ENSP00000430497.2:p.Tyr1046Asn
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3058T>A
  hgvsp: ENSP00000399605.2:p.Tyr1020Asn
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3058T>A
  hgvsp: ENSP00000050961.6:p.Tyr1020Asn
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr1046Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-77690500-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690500
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690500
    reference: chr 8
allele count: 167
allele frequency: 1.384054367644621e-3
allele num: 120660
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3150C>T
  hgvsp: ENST00000521891.2:c.3150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.439C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3072C>T
  hgvsp: ENST00000050961.6:c.3072C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3072C>T
  hgvsp: ENST00000455469.2:c.3072C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3072C>T
  hgvsp: ENST00000518282.1:c.3072C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11809
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 9.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16227
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14895
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12203
  bin: 9.75e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22626
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala1050Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

8-77690501-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690501
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690501
    reference: chr 8
allele count: 5
allele frequency: 4.143600623197534e-5
allele num: 120668
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3073G>A
  hgvsp: ENSP00000399605.2:p.Val1025Met
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3073G>A
  hgvsp: ENSP00000430848.1:p.Val1025Met
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.440G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3151G>A
  hgvsp: ENSP00000430497.2:p.Val1051Met
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3073G>A
  hgvsp: ENSP00000050961.6:p.Val1025Met
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5003
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12190
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Val1051Met
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-77690501-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690501
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690501
    reference: chr 8
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3073G>T
  hgvsp: ENSP00000399605.2:p.Val1025Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3073G>T
  hgvsp: ENSP00000050961.6:p.Val1025Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3151G>T
  hgvsp: ENSP00000430497.2:p.Val1051Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.440G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3073G>T
  hgvsp: ENSP00000430848.1:p.Val1025Leu
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2773
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22630
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val1051Leu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

8-77690518-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690518
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690518
    reference: chr 8
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3090C>G
  hgvsp: ENST00000518282.1:c.3090C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3090C>G
  hgvsp: ENST00000455469.2:c.3090C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.1C>G
  hgvsp: ENST00000523625.1:c.1C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.457C>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3090C>G
  hgvsp: ENST00000050961.6:c.3090C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3168C>G
  hgvsp: ENST00000521891.2:c.3168C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8109
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2773
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr1056Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

8-77690522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690522
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690522
    reference: chr 8
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3172G>A
  hgvsp: ENSP00000430497.2:p.Val1058Ile
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.461G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3094G>A
  hgvsp: ENSP00000430848.1:p.Val1032Ile
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.5G>A
  hgvsp: ENSP00000431101.1:p.Val3Ile
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3094G>A
  hgvsp: ENSP00000050961.6:p.Val1032Ile
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3094G>A
  hgvsp: ENSP00000399605.2:p.Val1032Ile
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2773
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8112
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val1058Ile
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

8-77690524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690524
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690524
    reference: chr 8
allele count: 7
allele frequency: 5.79950289975145e-5
allele num: 120700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3096C>T
  hgvsp: ENST00000455469.2:c.3096C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3096C>T
  hgvsp: ENST00000050961.6:c.3096C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3096C>T
  hgvsp: ENST00000518282.1:c.3096C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.1C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.7C>T
  hgvsp: ENST00000523625.1:c.7C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.463C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3174C>T
  hgvsp: ENST00000521891.2:c.3174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.1C>T
  hgvsp: ENST00000519536.1:c.1C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12195
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5008
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val1058Val
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

8-77690528-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690528
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690528
    reference: chr 8
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3100T>C
  hgvsp: ENST00000455469.2:c.3100T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.5T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3178T>C
  hgvsp: ENST00000521891.2:c.3178T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3100T>C
  hgvsp: ENST00000518282.1:c.3100T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3100T>C
  hgvsp: ENST00000050961.6:c.3100T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.467T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.5T>C
  hgvsp: ENST00000519536.1:c.5T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.11T>C
  hgvsp: ENST00000523625.1:c.11T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu1060Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

8-77690536-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690536
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690536
    reference: chr 8
allele count: 2
allele frequency: 1.65694591728526e-5
allele num: 120704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.19G>A
  hgvsp: ENST00000523625.1:c.19G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.13G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.13G>A
  hgvsp: ENST00000519536.1:c.13G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3108G>A
  hgvsp: ENST00000050961.6:c.3108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3108G>A
  hgvsp: ENST00000518282.1:c.3108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3108G>A
  hgvsp: ENST00000455469.2:c.3108G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.475G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3186G>A
  hgvsp: ENST00000521891.2:c.3186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12196
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8112
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2773
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu1062Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

8-77690539-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690539
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690539
    reference: chr 8
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3111A>G
  hgvsp: ENST00000455469.2:c.3111A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.16A>G
  hgvsp: ENST00000519536.1:c.16A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.16A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.22A>G
  hgvsp: ENST00000523625.1:c.22A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.478A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3189A>G
  hgvsp: ENST00000521891.2:c.3189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3111A>G
  hgvsp: ENST00000518282.1:c.3111A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3111A>G
  hgvsp: ENST00000050961.6:c.3111A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5010
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22620
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val1063Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

8-77690541-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690541
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690541
    reference: chr 8
allele count: 2
allele frequency: 1.656836105772417e-5
allele num: 120712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3113A>T
  hgvsp: ENSP00000430848.1:p.Gln1038Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3113A>T
  hgvsp: ENSP00000050961.6:p.Gln1038Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3191A>T
  hgvsp: ENSP00000430497.2:p.Gln1064Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.18A>T
  hgvsp: ENSP00000430375.1:p.Gln7Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3113A>T
  hgvsp: ENSP00000399605.2:p.Gln1038Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.480A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.18A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.24A>T
  hgvsp: ENSP00000431101.1:p.Gln9Leu
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11830
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5010
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln1064Leu
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/8-77690542-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690542
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690542
    reference: chr 8
allele count: 1
allele frequency: 8.283768783445716e-6
allele num: 120718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3114A>C
  hgvsp: ENSP00000430848.1:p.Gln1038His
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.19A>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.25A>C
  hgvsp: ENSP00000431101.1:p.Gln9His
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3192A>C
  hgvsp: ENSP00000430497.2:p.Gln1064His
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.19A>C
  hgvsp: ENSP00000430375.1:p.Gln7His
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3114A>C
  hgvsp: ENSP00000050961.6:p.Gln1038His
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3114A>C
  hgvsp: ENSP00000399605.2:p.Gln1038His
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.481A>C
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln1064His
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

8-77690550-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690550
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690550
    reference: chr 8
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.27G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3200G>T
  hgvsp: ENSP00000430497.2:p.Arg1067Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3122G>T
  hgvsp: ENSP00000430848.1:p.Arg1041Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.33G>T
  hgvsp: ENSP00000431101.1:p.Arg12Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.489G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3122G>T
  hgvsp: ENSP00000399605.2:p.Arg1041Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3122G>T
  hgvsp: ENSP00000050961.6:p.Arg1041Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.27G>T
  hgvsp: ENSP00000430375.1:p.Arg10Leu
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22597
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg1067Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ

8-77690553-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690553
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690553
    reference: chr 8
allele count: 1
allele frequency: 8.28363154406892e-6
allele num: 120720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3125C>T
  hgvsp: ENSP00000399605.2:p.Ser1042Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.30C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3203C>T
  hgvsp: ENSP00000430497.2:p.Ser1068Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3125C>T
  hgvsp: ENSP00000050961.6:p.Ser1042Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.36C>T
  hgvsp: ENSP00000431101.1:p.Ser13Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.30C>T
  hgvsp: ENSP00000430375.1:p.Ser11Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.492C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3125C>T
  hgvsp: ENSP00000430848.1:p.Ser1042Leu
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22598
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser1068Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

8-77690554-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690554
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690554
    reference: chr 8
allele count: 1
allele frequency: 8.283768783445716e-6
allele num: 120718
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3126G>A
  hgvsp: ENST00000518282.1:c.3126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3126G>A
  hgvsp: ENST00000050961.6:c.3126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.37G>A
  hgvsp: ENST00000523625.1:c.37G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.31G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3126G>A
  hgvsp: ENST00000455469.2:c.3126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3204G>A
  hgvsp: ENST00000521891.2:c.3204G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.31G>A
  hgvsp: ENST00000519536.1:c.31G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.493G>A
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2775
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5012
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser1068Ser
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

8-77690563-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690563
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690563
    reference: chr 8
allele count: 26679
allele frequency: 2.210502767374805e-1
allele num: 120692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3135T>C
  hgvsp: ENST00000455469.2:c.3135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.502T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.46T>C
  hgvsp: ENST00000523625.1:c.46T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.40T>C
  hgvsp: ENST00000519536.1:c.40T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3135T>C
  hgvsp: ENST00000050961.6:c.3135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3213T>C
  hgvsp: ENST00000521891.2:c.3213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.40T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3135T>C
  hgvsp: ENST00000518282.1:c.3135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 3.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 3.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 10428
  bin: 2.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 21404
  bin: 9.75e1
  variant carriers: 21245
genotype depth: GenotypeDepth
  all individuals: 10425
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 4.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 27177
  bin: 9.75e1
  variant carriers: 22692
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 4
hgvs: p.His1071His
num of homozygotes: 3952
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

8-77690564-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690564
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690564
    reference: chr 8
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.47C>G
  hgvsp: ENSP00000431101.1:p.Gln17Glu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.41C>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3214C>G
  hgvsp: ENSP00000430497.2:p.Gln1072Glu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3136C>G
  hgvsp: ENSP00000430848.1:p.Gln1046Glu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.41C>G
  hgvsp: ENSP00000430375.1:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3136C>G
  hgvsp: ENSP00000399605.2:p.Gln1046Glu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3136C>G
  hgvsp: ENSP00000050961.6:p.Gln1046Glu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.503C>G
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4858
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln1072Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

8-77690566-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690566
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690566
    reference: chr 8
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3216G>A
  hgvsp: ENST00000521891.2:c.3216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3138G>A
  hgvsp: ENST00000050961.6:c.3138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3138G>A
  hgvsp: ENST00000455469.2:c.3138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.43G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3138G>A
  hgvsp: ENST00000518282.1:c.3138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.49G>A
  hgvsp: ENST00000523625.1:c.49G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.43G>A
  hgvsp: ENST00000519536.1:c.43G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.505G>A
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln1072Gln
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-77690568-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690568
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690568
    reference: chr 8
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3140A>T
  hgvsp: ENSP00000050961.6:p.Gln1047Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.45A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.45A>T
  hgvsp: ENSP00000430375.1:p.Gln16Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3140A>T
  hgvsp: ENSP00000430848.1:p.Gln1047Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.51A>T
  hgvsp: ENSP00000431101.1:p.Gln18Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3140A>T
  hgvsp: ENSP00000399605.2:p.Gln1047Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3218A>T
  hgvsp: ENSP00000430497.2:p.Gln1073Leu
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.507A>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4857
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln1073Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

8-77690572-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690572
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690572
    reference: chr 8
allele count: 3
allele frequency: 2.484513201046808e-5
allele num: 120748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.511T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.49T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3222T>C
  hgvsp: ENST00000521891.2:c.3222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3144T>C
  hgvsp: ENST00000455469.2:c.3144T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.49T>C
  hgvsp: ENST00000519536.1:c.49T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3144T>C
  hgvsp: ENST00000518282.1:c.3144T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3144T>C
  hgvsp: ENST00000050961.6:c.3144T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.55T>C
  hgvsp: ENST00000523625.1:c.55T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr1074Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/8-77690578-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690578
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690578
    reference: chr 8
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3228C>A
  hgvsp: ENST00000521891.2:c.3228C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.517C>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.55C>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.61C>A
  hgvsp: ENST00000523625.1:c.61C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3150C>A
  hgvsp: ENST00000518282.1:c.3150C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3150C>A
  hgvsp: ENST00000050961.6:c.3150C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3150C>A
  hgvsp: ENST00000455469.2:c.3150C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.55C>A
  hgvsp: ENST00000519536.1:c.55C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9573
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3688
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly1076Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

8-77690580-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690580
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690580
    reference: chr 8
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.57T>C
  hgvsp: ENSP00000430375.1:p.Leu20Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3230T>C
  hgvsp: ENSP00000430497.2:p.Leu1077Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.57T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.519T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3152T>C
  hgvsp: ENSP00000050961.6:p.Leu1051Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3152T>C
  hgvsp: ENSP00000430848.1:p.Leu1051Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3152T>C
  hgvsp: ENSP00000399605.2:p.Leu1051Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.63T>C
  hgvsp: ENSP00000431101.1:p.Leu22Pro
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3528
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3688
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu1077Pro
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

8-77690581-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690581
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690581
    reference: chr 8
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.58A>G
  hgvsp: ENST00000519536.1:c.58A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3231A>G
  hgvsp: ENST00000521891.2:c.3231A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3153A>G
  hgvsp: ENST00000455469.2:c.3153A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.64A>G
  hgvsp: ENST00000523625.1:c.64A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3153A>G
  hgvsp: ENST00000518282.1:c.3153A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.58A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3153A>G
  hgvsp: ENST00000050961.6:c.3153A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.520A>G
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8446
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3687
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9572
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu1077Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

8-77690582-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690582
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690582
    reference: chr 8
allele count: 8
allele frequency: 6.62635633231177e-5
allele num: 120730
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3232C>T
  hgvsp: ENSP00000430497.2:p.Arg1078Trp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3154C>T
  hgvsp: ENSP00000050961.6:p.Arg1052Trp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.59C>T
  hgvsp: ENSP00000430375.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3154C>T
  hgvsp: ENSP00000430848.1:p.Arg1052Trp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.59C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.65C>T
  hgvsp: ENSP00000431101.1:p.Arg23Trp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3154C>T
  hgvsp: ENSP00000399605.2:p.Arg1052Trp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.521C>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg1078Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

8-77690589-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690589
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690589
    reference: chr 8
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.528T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3161T>C
  hgvsp: ENSP00000430848.1:p.Leu1054Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3161T>C
  hgvsp: ENSP00000050961.6:p.Leu1054Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3161T>C
  hgvsp: ENSP00000399605.2:p.Leu1054Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.66T>C
  hgvsp: ENSP00000430375.1:p.Leu23Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.66T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3239T>C
  hgvsp: ENSP00000430497.2:p.Leu1080Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.72T>C
  hgvsp: ENSP00000431101.1:p.Leu25Pro
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25926
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu1080Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

8-77690607-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690607
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690607
    reference: chr 8
allele count: 11
allele frequency: 9.11139089523557e-5
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.546G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3179G>A
  hgvsp: ENSP00000430848.1:p.Gly1060Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.90G>A
  hgvsp: ENSP00000431101.1:p.Gly31Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3179G>A
  hgvsp: ENSP00000050961.6:p.Gly1060Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.84G>A
  hgvsp: ENSP00000430375.1:p.Gly29Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3257G>A
  hgvsp: ENSP00000430497.2:p.Gly1086Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3179G>A
  hgvsp: ENSP00000399605.2:p.Gly1060Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.84G>A
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3525
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly1086Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/8-77690608-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690608
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690608
    reference: chr 8
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3258C>A
  hgvsp: ENST00000521891.2:c.3258C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3180C>A
  hgvsp: ENST00000518282.1:c.3180C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.85C>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.91C>A
  hgvsp: ENST00000523625.1:c.91C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.85C>A
  hgvsp: ENST00000519536.1:c.85C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3180C>A
  hgvsp: ENST00000455469.2:c.3180C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3180C>A
  hgvsp: ENST00000050961.6:c.3180C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.547C>A
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4860
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly1086Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

8-77690611-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690611
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690611
    reference: chr 8
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.88G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3183G>C
  hgvsp: ENST00000455469.2:c.3183G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.88G>C
  hgvsp: ENST00000519536.1:c.88G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3183G>C
  hgvsp: ENST00000518282.1:c.3183G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.550G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3261G>C
  hgvsp: ENST00000521891.2:c.3261G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3183G>C
  hgvsp: ENST00000050961.6:c.3183G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.94G>C
  hgvsp: ENST00000523625.1:c.94G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9565
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3688
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu1087Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

8-77690615-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690615
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690615
    reference: chr 8
allele count: 6
allele frequency: 4.970096585543646e-5
allele num: 120722
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3265C>T
  hgvsp: ENSP00000430497.2:p.Pro1089Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.92C>T
  hgvsp: ENSP00000430375.1:p.Pro32Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3187C>T
  hgvsp: ENSP00000399605.2:p.Pro1063Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.92C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3187C>T
  hgvsp: ENSP00000430848.1:p.Pro1063Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3187C>T
  hgvsp: ENSP00000050961.6:p.Pro1063Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.98C>T
  hgvsp: ENSP00000431101.1:p.Pro34Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.554C>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2553
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro1089Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

8-77690617-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690617
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690617
    reference: chr 8
allele count: 5
allele frequency: 4.141953013685013e-5
allele num: 120716
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3189A>G
  hgvsp: ENST00000518282.1:c.3189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3189A>G
  hgvsp: ENST00000455469.2:c.3189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3267A>G
  hgvsp: ENST00000521891.2:c.3267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.556A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.94A>G
  hgvsp: ENST00000519536.1:c.94A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.100A>G
  hgvsp: ENST00000523625.1:c.100A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.94A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3189A>G
  hgvsp: ENST00000050961.6:c.3189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2552
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro1089Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

8-77690618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690618
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690618
    reference: chr 8
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3190G>A
  hgvsp: ENSP00000430848.1:p.Glu1064Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3190G>A
  hgvsp: ENSP00000399605.2:p.Glu1064Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.101G>A
  hgvsp: ENSP00000431101.1:p.Glu35Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.557G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.95G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3268G>A
  hgvsp: ENSP00000430497.2:p.Glu1090Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3190G>A
  hgvsp: ENSP00000050961.6:p.Glu1064Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.95G>A
  hgvsp: ENSP00000430375.1:p.Glu33Lys
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8420
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu1090Lys
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum

8-77690623-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690623
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690623
    reference: chr 8
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3195G>T
  hgvsp: ENSP00000399605.2:p.Glu1065Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3195G>T
  hgvsp: ENSP00000430848.1:p.Glu1065Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.100G>T
  hgvsp: ENSP00000430375.1:p.Glu34Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.562G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3195G>T
  hgvsp: ENSP00000050961.6:p.Glu1065Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.100G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3273G>T
  hgvsp: ENSP00000430497.2:p.Glu1091Asp
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.106G>T
  hgvsp: ENSP00000431101.1:p.Glu36Asp
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4856
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu1091Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

8-77690628-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690628
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690628
    reference: chr 8
allele count: 1
allele frequency: 8.285004142502071e-6
allele num: 120700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.111A>G
  hgvsp: ENSP00000431101.1:p.Asn38Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3200A>G
  hgvsp: ENSP00000430848.1:p.Asn1067Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.567A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3200A>G
  hgvsp: ENSP00000050961.6:p.Asn1067Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.105A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.105A>G
  hgvsp: ENSP00000430375.1:p.Asn36Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3200A>G
  hgvsp: ENSP00000399605.2:p.Asn1067Ser
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3278A>G
  hgvsp: ENSP00000430497.2:p.Asn1093Ser
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9573
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4856
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn1093Ser
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

8-77690630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690630
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690630
    reference: chr 8
allele count: 11
allele frequency: 9.113806588453636e-5
allele num: 120696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3202C>T
  hgvsp: ENSP00000399605.2:p.Leu1068Phe
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.113C>T
  hgvsp: ENSP00000431101.1:p.Leu39Phe
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3280C>T
  hgvsp: ENSP00000430497.2:p.Leu1094Phe
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.107C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.569C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3202C>T
  hgvsp: ENSP00000430848.1:p.Leu1068Phe
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.107C>T
  hgvsp: ENSP00000430375.1:p.Leu37Phe
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3202C>T
  hgvsp: ENSP00000050961.6:p.Leu1068Phe
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 14298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11074
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu1094Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

8-77690634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690634
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690634
    reference: chr 8
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.573G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.111G>A
  hgvsp: ENSP00000430375.1:p.Ser38Asn
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3206G>A
  hgvsp: ENSP00000430848.1:p.Ser1069Asn
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.117G>A
  hgvsp: ENSP00000431101.1:p.Ser40Asn
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3206G>A
  hgvsp: ENSP00000050961.6:p.Ser1069Asn
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.111G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3284G>A
  hgvsp: ENSP00000430497.2:p.Ser1095Asn
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3206G>A
  hgvsp: ENSP00000399605.2:p.Ser1069Asn
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser1095Asn
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

8-77690641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690641
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690641
    reference: chr 8
allele count: 18
allele frequency: 1.491646778042959e-4
allele num: 120672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3213C>T
  hgvsp: ENST00000455469.2:c.3213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.118C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.118C>T
  hgvsp: ENST00000519536.1:c.118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3213C>T
  hgvsp: ENST00000050961.6:c.3213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.580C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3291C>T
  hgvsp: ENST00000521891.2:c.3291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3213C>T
  hgvsp: ENST00000518282.1:c.3213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.124C>T
  hgvsp: ENST00000523625.1:c.124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8414
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile1097Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD

8-77690655-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690655
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690655
    reference: chr 8
allele count: 1
allele frequency: 8.293111741387604e-6
allele num: 120582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3227A>T
  hgvsp: ENSP00000430848.1:p.Asp1076Val
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3227A>T
  hgvsp: ENSP00000399605.2:p.Asp1076Val
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.138A>T
  hgvsp: ENSP00000431101.1:p.Asp47Val
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.132A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3305A>T
  hgvsp: ENSP00000430497.2:p.Asp1102Val
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.132A>T
  hgvsp: ENSP00000430375.1:p.Asp45Val
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3227A>T
  hgvsp: ENSP00000050961.6:p.Asp1076Val
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.594A>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8399
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp1102Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

8-77690673-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690673
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690673
    reference: chr 8
allele count: 1
allele frequency: 8.302200083022e-6
allele num: 120450
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.612T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.150T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3245T>C
  hgvsp: ENSP00000050961.6:p.Leu1082Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3245T>C
  hgvsp: ENSP00000399605.2:p.Leu1082Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.150T>C
  hgvsp: ENSP00000430375.1:p.Leu51Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3245T>C
  hgvsp: ENSP00000430848.1:p.Leu1082Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3323T>C
  hgvsp: ENSP00000430497.2:p.Leu1108Pro
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.156T>C
  hgvsp: ENSP00000431101.1:p.Leu53Pro
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9522
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2550
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu1108Pro
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum

8-77690675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690675
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690675
    reference: chr 8
allele count: 1
allele frequency: 8.303854649328218e-6
allele num: 120426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158G>A
  hgvsp: ENSP00000431101.1:p.Glu54Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247G>A
  hgvsp: ENSP00000399605.2:p.Glu1083Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247G>A
  hgvsp: ENSP00000430848.1:p.Glu1083Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000517683
  gene symbol: ZFHX4
  hgvsc: ENST00000517683.1:n.614G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247G>A
  hgvsp: ENSP00000050961.6:p.Glu1083Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325G>A
  hgvsp: ENSP00000430497.2:p.Glu1109Lys
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.152G>A
  hgvsp: ENSP00000430375.1:p.Ala52Thr
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8397
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3507
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu1109Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

8-77690687-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690687
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690687
    reference: chr 8
allele count: 1
allele frequency: 8.326533331112925e-6
allele num: 120098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+12T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+12T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+12T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.152+12T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+12T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+12T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+12T>C
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24872
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3658
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

8-77690690-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690690
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690690
    reference: chr 8
allele count: 1
allele frequency: 8.327365388138501e-6
allele num: 120086
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+15A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+15A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+15A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+15A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+15A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.152+15A>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+15A>G
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4801
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8391
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9294
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

8-77690697-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690697
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690697
    reference: chr 8
allele count: 1
allele frequency: 8.341118377152009e-6
allele num: 119888
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+22T>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+22T>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+22T>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+22T>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+22T>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+22T>G
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.152+22T>G
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9117
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

8-77690698-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690698
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690698
    reference: chr 8
allele count: 1
allele frequency: 8.346130733791815e-6
allele num: 119816
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+23G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+23G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+23G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+23G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+23G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+23G>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.152+23G>C
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13624
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4772
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD

8-77690708-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690708
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690708
    reference: chr 8
allele count: 2
allele frequency: 1.674284661878213e-5
allele num: 119454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.152+33C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+33C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+33C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+33C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+33C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+33C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+33C>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4690
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8376
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2533
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

8-77690709-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690709
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690709
    reference: chr 8
allele count: 1
allele frequency: 8.380965151946898e-6
allele num: 119318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+34T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+34T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.152+34T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+34T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+34T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+34T>C
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+34T>C
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13139
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19824
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8357
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4654
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-77690717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77690717
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77690717
    reference: chr 8
allele count: 1
allele frequency: 8.419351036422112e-6
allele num: 118774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+42C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+42C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+42C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.152+42C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+42C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+42C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+42C>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2559
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2812
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3560
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

8-77694336-ATTTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694336
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694331
    reference: chr 8
allele count: 4
allele frequency: 5.803830528148578e-4
allele num: 6892
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3681_158+3685delTTTTT
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3681_3247+3685delTTTTT
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3681_3325+3685delTTTTT
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-23_153-19delTTTTT
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3681_3247+3685delTTTTT
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3681_152+3685delTTTTT
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3681_3247+3685delTTTTT
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: ATTTTT
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

8-77694336-ATTTTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694336
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694330
    reference: chr 8
allele count: 11
allele frequency: 1.596053395240859e-3
allele num: 6892
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 56
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 1.666666666666667e-2
  allele num: 60
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 112
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 3
  allele frequency: 1.691093573844419e-3
  allele num: 1774
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
reference allele: ATTTTTT
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

8-77694336-ATTTTTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694336
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694329
    reference: chr 8
allele count: 15
allele frequency: 2.176436448055717e-3
allele num: 6892
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 74
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 5.636978579481398e-4
  allele num: 1774
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 56
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 8.928571428571428e-3
  allele num: 112
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
reference allele: ATTTTTTT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

8-77694336-ATTTTTTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694336
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694328
    reference: chr 8
allele count: 28
allele frequency: 4.062681369704005e-3
allele num: 6892
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: ATTTTTTTT
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum

8-77694336-ATTTTTTTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694336
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694327
    reference: chr 8
allele count: 15
allele frequency: 2.176436448055717e-3
allele num: 6892
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 60
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 56
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 112
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: ATTTTTTTTT
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

8-77694336-ATTTTTTTTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694336
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694326
    reference: chr 8
allele count: 5
allele frequency: 7.254788160185723e-4
allele num: 6892
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 5
  allele frequency: 1.038205980066445e-3
  allele num: 4816
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 60
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 112
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: ATTTTTTTTTT
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-77694342-T-TTTTTTTTTTTTTTTTTTTTTTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694342
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694365
    reference: chr 8
allele count: 4
allele frequency: 9.900990099009901e-3
allele num: 404
alternate allele: TTTTTTTTTTTTTTTTTTTTTTCC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff

8-77694358-TTTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694358
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694355
    reference: chr 8
allele count: 1
allele frequency: 1.085304970696766e-4
allele num: 9214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3684_152+3686delTTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3684_158+3686delTTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3684_3247+3686delTTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3684_3247+3686delTTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3684_3247+3686delTTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-20_153-18delTTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3684_3325+3686delTTG
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3447
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: TTTG
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

8-77694359-TTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694359
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694357
    reference: chr 8
allele count: 3
allele frequency: 3.311258278145695e-4
allele num: 9060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3685_3247+3686delTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3685_3247+3686delTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-19_153-18delTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3685_152+3686delTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3685_3325+3686delTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3685_3247+3686delTG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3685_158+3686delTG
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: TTG
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

8-77694360-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694360
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694359
    reference: chr 8
allele count: 5
allele frequency: 6.930967563071804e-4
allele num: 7214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3686delG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3686delG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3686delG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3686delG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3686delG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3686delG
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-18delG
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: TG
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

8-77694361-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694361
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694361
    reference: chr 8
allele count: 13
allele frequency: 6.310679611650485e-2
allele num: 206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3686G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3686G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-18G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3686G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3686G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3686G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3686G>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5159
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

8-77694363-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694363
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694363
    reference: chr 8
allele count: 2
allele frequency: 4.37636761487965e-4
allele num: 4570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3688C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-16C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3688C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3688C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3688C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3688C>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3688C>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

8-77694365-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694365
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694365
    reference: chr 8
allele count: 21
allele frequency: 1.791808873720136e-2
allele num: 1172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3690A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3690A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3690A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-14A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3690A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3690A>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3690A>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

8-77694368-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694368
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694368
    reference: chr 8
allele count: 19
allele frequency: 1.268357810413885e-2
allele num: 1498
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3693G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3693G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-11G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3693G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3693G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3693G>T
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3693G>T
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4406
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

8-77694368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77694368
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 77694368
    reference: chr 8
allele count: 1
allele frequency: 6.675567423230974e-4
allele num: 1498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl transcript: ENST00000524290
  gene symbol: ZFHX4
  hgvsc: ENST00000524290.1:n.152+3693G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000399605
  ensembl transcript: ENST00000455469
  gene symbol: ZFHX4
  hgvsc: ENST00000455469.2:c.3247+3693G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430848
  ensembl transcript: ENST00000518282
  gene symbol: ZFHX4
  hgvsc: ENST00000518282.1:c.3247+3693G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000050961
  ensembl transcript: ENST00000050961
  gene symbol: ZFHX4
  hgvsc: ENST00000050961.6:c.3247+3693G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430497
  ensembl transcript: ENST00000521891
  gene symbol: ZFHX4
  hgvsc: ENST00000521891.2:c.3325+3693G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000431101
  ensembl transcript: ENST00000523625
  gene symbol: ZFHX4
  hgvsc: ENST00000523625.1:c.158+3693G>A
  variant of: http://identifiers.org/hgnc/30939
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000091656
  ensembl protein: ENSP00000430375
  ensembl transcript: ENST00000519536
  gene symbol: ZFHX4
  hgvsc: ENST00000519536.1:c.153-11G>A
  variant of: http://identifiers.org/hgnc/30939
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4406
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP

GenotypeQuality
all individuals: 3954
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7873
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4897
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11965
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516070345664039e-5
allele num: 65960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.773e0

QD
type: SiteQuality
SIO_000300: 1.593e1

VQSLOD
type: SiteQuality
SIO_000300: -2.147e0

MQRankSum
type: SiteQuality
SIO_000300: -1.831e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 1.959972e6

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12050
bin: 9.75e1
variant carriers: 148

GenotypeQuality
all individuals: 2729
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 7.75e1
variant carriers: 1

Latino
type: Population
allele count: 14
allele frequency: 1.231527093596059e-3
allele num: 11368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

African
type: Population
allele count: 129
allele frequency: 1.337619245126504e-2
allele num: 9644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.272727272727273e-3
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.031037827352085e-5
allele num: 65984
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.965528e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.602e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

GenotypeQuality
all individuals: 7863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4910
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12030
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1993
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514784294716432e-5
allele num: 66016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.969032e6

VQSLOD
type: SiteQuality
SIO_000300: -2.835e0

QD
type: SiteQuality
SIO_000300: 1.167e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

FS
type: SiteQuality
SIO_000300: 1.617e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.775e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.21e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 271
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3958
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.827485380116959e-4
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.167e1

FS
type: SiteQuality
SIO_000300: 1.617e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.775e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

DP
type: SiteQuality
SIO_000300: 1.969032e6

VQSLOD
type: SiteQuality
SIO_000300: -2.835e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

GenotypeQuality
all individuals: 2023
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12068
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506704836522525e-5
allele num: 66370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

FS
type: SiteQuality
SIO_000300: 4.065e0

DP
type: SiteQuality
SIO_000300: 1.984021e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.373e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.896e1

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2785
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8081
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12081
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.094e0

FS
type: SiteQuality
SIO_000300: 8.194000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

DP
type: SiteQuality
SIO_000300: 1.991233e6

VQSLOD
type: SiteQuality
SIO_000300: -2.903e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22578
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4993
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4040
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.051282051282051e-4
allele num: 9750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.421e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 1.183e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.497e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

DP
type: SiteQuality
SIO_000300: 1.992227e6

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12084
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4040
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001200480192077e-5
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

DP
type: SiteQuality
SIO_000300: 1.992227e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.497e0

QD
type: SiteQuality
SIO_000300: 1.421e1

FS
type: SiteQuality
SIO_000300: 1.183e0

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 3505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5001
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.597e1

DP
type: SiteQuality
SIO_000300: 1.993311e6

FS
type: SiteQuality
SIO_000300: 1.194e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

GenotypeQuality
all individuals: 2028
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4999
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12088
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 101
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8105
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22622
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.023960679909891e-4
allele num: 9766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.626e0

FS
type: SiteQuality
SIO_000300: 3.785e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

QD
type: SiteQuality
SIO_000300: 5.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

DP
type: SiteQuality
SIO_000300: 1.993598e6

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.44e-1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12088
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4047
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5003
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.498560460652591e-5
allele num: 66688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.056e0

MQRankSum
type: SiteQuality
SIO_000300: -2.66e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 1.994257e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.35e-1

QD
type: SiteQuality
SIO_000300: 1.294e1

VQSLOD
type: SiteQuality
SIO_000300: 9.44e-1

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5005
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4050
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12087
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8115
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e-1

FS
type: SiteQuality
SIO_000300: 4.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.065e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.253e1

DP
type: SiteQuality
SIO_000300: 1.994394e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4999
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 13
allele frequency: 1.127297953520638e-3
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.090116279069767e-3
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 131
allele frequency: 1.337007552561747e-2
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.996282304970918e-5
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-2

QD
type: SiteQuality
SIO_000300: 1.317e1

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

FS
type: SiteQuality
SIO_000300: 1.173e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.91e-1

DP
type: SiteQuality
SIO_000300: 2.012533e6

GenotypeQuality
all individuals: 3502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2773
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8107
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.325581395348837e-4
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49707690001499e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.011213e6

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

FS
type: SiteQuality
SIO_000300: 5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

QD
type: SiteQuality
SIO_000300: 1.17e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

GenotypeQuality
all individuals: 2029
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12190
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5003
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

DP
type: SiteQuality
SIO_000300: 2.011213e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

QD
type: SiteQuality
SIO_000300: 1.17e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

FS
type: SiteQuality
SIO_000300: 5.56e-1

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12189
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22632
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5008
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.023e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

MQRankSum
type: SiteQuality
SIO_000300: 4.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.34e0

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e-1

QD
type: SiteQuality
SIO_000300: 1.086e1

DP
type: SiteQuality
SIO_000300: 2.011634e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-2

GenotypeQuality
all individuals: 38
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.011728e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.834e0

VQSLOD
type: SiteQuality
SIO_000300: -2.33e0

MQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 5.524e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 3.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2773
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8110
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4049
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22628
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049129222745122e-4
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.208e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.605e0

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 1.143e0

DP
type: SiteQuality
SIO_000300: 2.012271e6

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeQuality
all individuals: 8109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12196
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22626
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.012441e6

VQSLOD
type: SiteQuality
SIO_000300: 9.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.01e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 2.609e0

QD
type: SiteQuality
SIO_000300: 1.433e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.06e0

GenotypeQuality
all individuals: 5007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997422216893472e-5
allele num: 66724
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.329e0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

QD
type: SiteQuality
SIO_000300: 1.266e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-2

FS
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
SIO_000300: 2.012685e6

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12195
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.469e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 4.291e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e0

QD
type: SiteQuality
SIO_000300: 1.987e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 2.0125e6

GenotypeQuality
all individuals: 8121
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

FS
type: SiteQuality
SIO_000300: 1.106e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

DP
type: SiteQuality
SIO_000300: 2.012694e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.103e0

MQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.59e-1

QD
type: SiteQuality
SIO_000300: 1.431e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5010
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.508e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.374e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

DP
type: SiteQuality
SIO_000300: 2.012521e6

MQRankSum
type: SiteQuality
SIO_000300: -2.208e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4050
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12195
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3509
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

VQSLOD
type: SiteQuality
SIO_000300: -1.884e0

QD
type: SiteQuality
SIO_000300: 2.688e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

DP
type: SiteQuality
SIO_000300: 2.012868e6

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5010
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4049
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12196
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.555e0

MQ
type: SiteQuality
SIO_000300: 5.91e1

FS
type: SiteQuality
SIO_000300: 4.74e-1

DP
type: SiteQuality
SIO_000300: 2.012997e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.5e-2

QD
type: SiteQuality
SIO_000300: 1.556e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

GenotypeQuality
all individuals: 8131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4050
bin: 8.25e1
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GenotypeQuality
all individuals: 2032
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 1.779e0

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

DP
type: SiteQuality
SIO_000300: 2.013096e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.61e-1

QD
type: SiteQuality
SIO_000300: 2.964e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e-1

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
all individuals: 5704
bin: 6.75e1
variant carriers: 2

South Asian
type: Population
allele count: 3125
allele frequency: 1.892792247122956e-1
allele num: 16510
num of homozygotes: 324

European (Finnish)
type: Population
allele count: 1418
allele frequency: 2.143937103114605e-1
allele num: 6614
num of homozygotes: 156

Other
type: Population
allele count: 167
allele frequency: 1.859688195991091e-1
allele num: 898
num of homozygotes: 13

Latino
type: Population
allele count: 2076
allele frequency: 1.796469366562825e-1
allele num: 11556
num of homozygotes: 201

African
type: Population
allele count: 5594
allele frequency: 5.701182225845903e-1
allele num: 9812
num of homozygotes: 1622

European (Non-Finnish)
type: Population
allele count: 10748
allele frequency: 1.61076641788808e-1
allele num: 66726
num of homozygotes: 902

East Asian
type: Population
allele count: 3551
allele frequency: 4.140625e-1
allele num: 8576
num of homozygotes: 734

DP
type: SiteQuality
SIO_000300: 5.381758e6

QD
type: SiteQuality
SIO_000300: 1.823e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

GenotypeQuality
all individuals: 9574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25906
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 1.118e0

DP
type: SiteQuality
SIO_000300: 2.007461e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.61e0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e0

QD
type: SiteQuality
SIO_000300: 1.442e1

MQ
type: SiteQuality
SIO_000300: 5.932e1

VQSLOD
type: SiteQuality
SIO_000300: -2.491e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4857
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.019575856443719e-4
allele num: 9808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.088e0

DP
type: SiteQuality
SIO_000300: 2.007112e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.39e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.45e0

FS
type: SiteQuality
SIO_000300: 2.493e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 25909
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.139e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 3.781e0

InbreedingCoeff
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SIO_000300: 4.7e-3

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 2.007185e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495594317568783e-5
allele num: 66732
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 4.0e-4

DP
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SIO_000300: 2.007515e6

QD
type: SiteQuality
SIO_000300: 1.105e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.26e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

BaseQRankSum
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SIO_000300: -4.213e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.019575856443719e-4
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.868e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

DP
type: SiteQuality
SIO_000300: 2.006949e6

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.515e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

FS
type: SiteQuality
SIO_000300: 5.49e-1

DP
type: SiteQuality
SIO_000300: 2.00689e6

QD
type: SiteQuality
SIO_000300: 1.338e1

MQ
type: SiteQuality
SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.44e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.014e1

QD
type: SiteQuality
SIO_000300: 1.362e1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0104e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

DP
type: SiteQuality
SIO_000300: 2.00674e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 8.99199712256092e-5
allele num: 66726
num of homozygotes: 0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.176e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

East Asian
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Other
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African
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Latino
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European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
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ClippingRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
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allele count: 10
allele frequency: 1.498756032493031e-4
allele num: 66722
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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Other
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South Asian
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.3e-3

FS
type: SiteQuality
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DP
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

Other
type: Population
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allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.986e1

FS
type: SiteQuality
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VQSLOD
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SIO_000300: -2.023e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
type: SiteQuality
SIO_000300: 1.314e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.159e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.176e0

DP
type: SiteQuality
SIO_000300: 2.004495e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25941
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.295e1

VQSLOD
type: SiteQuality
SIO_000300: -1.065e0

MQRankSum
type: SiteQuality
SIO_000300: -8.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.995e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.64e0

FS
type: SiteQuality
SIO_000300: 5.746e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.944e1

DP
type: SiteQuality
SIO_000300: 2.004386e6

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 89
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GenotypeQuality
all individuals: 3687
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496537665997182e-5
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.483511379470506e-4
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.185e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.414e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

QD
type: SiteQuality
SIO_000300: 1.095e1

DP
type: SiteQuality
SIO_000300: 2.004225e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 8423
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.494229443328637e-5
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.850000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

QD
type: SiteQuality
SIO_000300: 1.161e1

DP
type: SiteQuality
SIO_000300: 2.004168e6

MQRankSum
type: SiteQuality
SIO_000300: -3.38e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 9568
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 3684
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.539e-1

QD
type: SiteQuality
SIO_000300: 6.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

DP
type: SiteQuality
SIO_000300: 2.003532e6

FS
type: SiteQuality
SIO_000300: 3.986e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.243e0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8420
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: 6.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.86e-1

DP
type: SiteQuality
SIO_000300: 2.003257e6

MQ
type: SiteQuality
SIO_000300: 5.986e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.261e0

QD
type: SiteQuality
SIO_000300: 1.002e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.51e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.35e0

FS
type: SiteQuality
SIO_000300: 4.789e0

DP
type: SiteQuality
SIO_000300: 2.003022e6

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -7.517e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 11
allele frequency: 1.122448979591837e-3
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

DP
type: SiteQuality
SIO_000300: 2.002879e6

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.659e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 2550
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.67e-1

MQ
type: SiteQuality
SIO_000300: 5.898e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.556e0

FS
type: SiteQuality
SIO_000300: 2.723e0

QD
type: SiteQuality
SIO_000300: 1.307e1

VQSLOD
type: SiteQuality
SIO_000300: -2.908e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.73e-1

DP
type: SiteQuality
SIO_000300: 2.001135e6

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2550
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GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
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allele count: 0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 18
allele frequency: 2.69873159614981e-4
allele num: 66698
num of homozygotes: 0

VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
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DP
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FS
type: SiteQuality
SIO_000300: 6.06e-1

MQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

DP
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FS
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QD
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VQSLOD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.77e-1

MQRankSum
type: SiteQuality
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FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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SIO_000300: 1.994844e6

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.42e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66524
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.994454e6

ClippingRankSum
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SIO_000300: -1.423e0

VQSLOD
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
SIO_000300: 1.614e1

FS
type: SiteQuality
SIO_000300: 6.539e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66354
num of homozygotes: 0

East Asian
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allele frequency: 1.169864295741694e-4
allele num: 8548
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.782e0

VQSLOD
type: SiteQuality
SIO_000300: 1.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.981723e6

MQRankSum
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MQ
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507159005275056e-5
allele num: 66350
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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SIO_000300: 5.903e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
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allele frequency: 8.69414014953921e-5
allele num: 11502
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66250
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South Asian
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Other
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African
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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MQ
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FS
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele num: 9770
num of homozygotes: 0

Other
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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allele frequency: 1.518372304889159e-4
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European (Non-Finnish)
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allele num: 66042
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East Asian
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Other
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ReadPosRankSum
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QD
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FS
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 1.026694045174538e-4
allele num: 9740
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.45e-1

QD
type: SiteQuality
SIO_000300: 1.061e1

DP
type: SiteQuality
SIO_000300: 1.912337e6

MQRankSum
type: SiteQuality
SIO_000300: 2.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7369
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GenotypeQuality
all individuals: 3133
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65742
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.027960526315789e-4
allele num: 9728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15942
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.412e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.187e0

FS
type: SiteQuality
SIO_000300: 1.518e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.887e1

QD
type: SiteQuality
SIO_000300: 1.441e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.786e0

DP
type: SiteQuality
SIO_000300: 1.87454e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 310
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 145
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.636978579481398e-4
allele num: 1774
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.785714285714286e-2
allele num: 56
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South Asian
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allele count: 2
allele frequency: 4.152823920265781e-4
allele num: 4816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
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Latino
type: Population
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allele frequency: 0.0e0
allele num: 60
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VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 4.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.112e-1

FS
type: SiteQuality
SIO_000300: 1.999e0

QD
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SIO_000300: 2.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.36329e5

South Asian
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allele count: 7
allele frequency: 1.453488372093023e-3
allele num: 4816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
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MQ
type: SiteQuality
SIO_000300: 4.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.112e-1

VQSLOD
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SIO_000300: 4.54e-1

MQRankSum
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SIO_000300: -1.739e0

FS
type: SiteQuality
SIO_000300: 1.999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 1.36329e5

South Asian
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allele count: 13
allele frequency: 2.699335548172757e-3
allele num: 4816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.112e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e0

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

DP
type: SiteQuality
SIO_000300: 1.36329e5

FS
type: SiteQuality
SIO_000300: 1.999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 4.951e1

QD
type: SiteQuality
SIO_000300: 2.37e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
all individuals: 294
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 243
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GenotypeQuality
all individuals: 119
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.666666666666667e-2
allele num: 60
num of homozygotes: 0

South Asian
type: Population
allele count: 25
allele frequency: 5.191029900332226e-3
allele num: 4816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.636978579481398e-4
allele num: 1774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.351351351351351e-2
allele num: 74
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 2.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.112e-1

FS
type: SiteQuality
SIO_000300: 1.999e0

MQ
type: SiteQuality
SIO_000300: 4.951e1

DP
type: SiteQuality
SIO_000300: 1.36329e5

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.12739571589628e-3
allele num: 1774
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 2.699335548172757e-3
allele num: 4816
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.112e-1

MQ
type: SiteQuality
SIO_000300: 4.951e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

FS
type: SiteQuality
SIO_000300: 1.999e0

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e0

DP
type: SiteQuality
SIO_000300: 1.36329e5

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1774
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

DP
type: SiteQuality
SIO_000300: 1.36329e5

FS
type: SiteQuality
SIO_000300: 1.999e0

VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.112e-1

MQ
type: SiteQuality
SIO_000300: 4.951e1

QD
type: SiteQuality
SIO_000300: 2.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 10
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 1.680672268907563e-2
allele num: 238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
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VQSLOD
type: SiteQuality
SIO_000300: -1.453e0

QD
type: SiteQuality
SIO_000300: 3.007e1

MQ
type: SiteQuality
SIO_000300: 5.419e1

FS
type: SiteQuality
SIO_000300: 2.0792e1

DP
type: SiteQuality
SIO_000300: 1.43307e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.276e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.538461538461539e-4
allele num: 6500
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2256
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.08e-1

FS
type: SiteQuality
SIO_000300: 2.4681e1

DP
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InbreedingCoeff
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VQSLOD
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MQ
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
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allele count: 1
allele frequency: 9.259259259259259e-3
allele num: 108
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.563477173233271e-4
allele num: 6396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.480286738351254e-4
allele num: 2232
num of homozygotes: 0

African
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allele count: 0
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East Asian
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allele count: 0
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allele num: 108
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.95e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.19e0

FS
type: SiteQuality
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VQSLOD
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DP
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SIO_000300: 1.43648e5

MQRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.323e1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.141552511415525e-3
allele num: 1752
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Other
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 72
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South Asian
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allele count: 3
allele frequency: 5.921831819976313e-4
allele num: 5066
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQ
type: SiteQuality
SIO_000300: 5.4e1

MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.02e-2

QD
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FS
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 1.03448275862069e-1
allele num: 58
num of homozygotes: 0

East Asian
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Other
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South Asian
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allele count: 7
allele frequency: 5.223880597014925e-2
allele num: 134
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

ClippingRankSum
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SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 1.29826e5

MQ
type: SiteQuality
SIO_000300: 5.659e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.931e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.152e1

FS
type: SiteQuality
SIO_000300: 6.0208e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.237e0

MQRankSum
type: SiteQuality
SIO_000300: -1.449e0

GenotypeQuality
all individuals: 254
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 6.253908692933083e-4
allele num: 3198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1116
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.19e0

FS
type: SiteQuality
SIO_000300: 1.3685e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.72e-1

MQ
type: SiteQuality
SIO_000300: 5.635e1

MQRankSum
type: SiteQuality
SIO_000300: -1.664e0

VQSLOD
type: SiteQuality
SIO_000300: 2.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.09e0

DP
type: SiteQuality
SIO_000300: 1.38615e5

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4501
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 89
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 1

South Asian
type: Population
allele count: 12
allele frequency: 1.38568129330254e-2
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 3.361344537815126e-2
allele num: 238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.666666666666667e-1
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.5496e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 1.68046e5

MQRankSum
type: SiteQuality
SIO_000300: -2.397e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.895e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.227e1

MQ
type: SiteQuality
SIO_000300: 5.54e1

QD
type: SiteQuality
SIO_000300: 4.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.457e-1

GenotypeQuality
all individuals: 605
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 9.75e1
variant carriers: 17

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 9.892086330935251e-3
allele num: 1112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 3.125e-2
allele num: 256
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.869e0

MQ
type: SiteQuality
SIO_000300: 5.419e1

FS
type: SiteQuality
SIO_000300: 3.2826e1

QD
type: SiteQuality
SIO_000300: 4.33e0

DP
type: SiteQuality
SIO_000300: 1.90407e5

VQSLOD
type: SiteQuality
SIO_000300: -7.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.753e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.298e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.78e-2

GenotypeQuality
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.992805755395684e-4
allele num: 1112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.90407e5